RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TMEM178BH3BS89 294 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 TIMM23O14925 209 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 FARS2O95363 451 aaKnown RBP9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 SLC2A10O95528 541 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 CH25HO95992 272 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ETS2P15036 469 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 BGNP21810 368 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 APLNRP35414 380 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 PPP1CBP62140 327 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 TAF9Q16594 264 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 KLHL36Q8N4N3 616 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 OR4D11Q8NGI4 311 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ABHD4Q8TB40 342 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ITLN1Q8WWA0 313 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 UBE2FQ969M7 185 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 EPYCQ99645 322 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 IKZF5Q9H5V7 419 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 TMEM165Q9HC07 324 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 SLAMF8Q9P0V8 285 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 OR5V1Q9UGF6 321 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 RNF114Q9Y508 228 aa9.92□□□□□ -0.82
SPTLC1P3-201ENST00000403408 SACSQ9NZJ4 4579 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 PLSCR5A0PG75 271 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 M0R3H8 397 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 CLIC1O00299 241 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 RNF13O43567 381 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ICMTO60725 284 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 TRMUO75648 421 aaKnown RBP9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 PTHP01270 115 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 IL6P05231 212 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ASAH2BP0C7U1 165 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ERVK-25P63136 954 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 HOXA4Q00056 320 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 HSF2Q03933 536 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 PLP2Q04941 152 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 FMODQ06828 376 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 LRRC74AQ0VAA2 488 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 HLXQ14774 488 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 NRN1LQ496H8 165 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 PDCD4Q53EL6 469 aaKnown RBP9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ESCO2Q56NI9 601 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 MTX3Q5HYI7 312 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 FAM201AQ5SY85 155 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 C10orf128Q5T292 105 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 KPRPQ5T749 579 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 SLC2A7Q6PXP3 512 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 MAVSQ7Z434 540 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 DPPA2Q7Z7J5 298 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 KLBQ86Z14 1044 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 RBM45Q8IUH3 476 aaKnown RBP9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 FITM2Q8N6M3 262 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 C10orf82Q8WW14 230 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 RAB40AQ8WXH6 277 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 SAMD8Q96LT4 415 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 CDADC1Q9BWV3 514 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 SIAEQ9HAT2 523 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ZDHHC8Q9ULC8 765 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 RYR2Q92736 4967 aa9.91□□□□□ -0.82
SPTLC1P3-201ENST00000403408 KIR2DS1A0A191URI9 304 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 C22orf46C9J442 243 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 SLC22A3O75751 556 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 TGDSO95455 350 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 MT-ATP6P00846 226 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 F13BP05160 661 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 SCG5P05408 212 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 SFTPBP07988 381 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 PMELP40967 661 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 MMP16P51512 607 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 UGT2B15P54855 530 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 RGS8P57771 180 aaPredicted RBP9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 FGF12P61328 243 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 MRPS34P82930 218 aaKnown RBP9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 BST1Q10588 318 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 LRRN1Q6UXK5 716 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 CLDN22Q8N7P3 220 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 EIF1ADQ8N9N8 165 aaKnown RBP9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 NOXO1Q8NFA2 376 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 OR2Z1Q8NG97 314 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 GPR32P1Q8NGA4 272 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ZNF420Q8TAQ5 688 aaPredicted RBP9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ASB10Q8WXI3 467 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 HDAC2Q92769 488 aaKnown RBP9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ZDHHC16Q969W1 377 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ITCHQ96J02 903 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ZNF607Q96SK3 696 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ZBTB18Q99592 522 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 SSBP3Q9BWW4 388 aaPredicted RBP9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 LRMDAQ9H2I8 198 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 TMEM27Q9HBJ8 222 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 MEPEQ9NQ76 525 aaPredicted RBP9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 CYSLTR2Q9NS75 346 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 IL20RAQ9UHF4 553 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 LRCH1Q9Y2L9 728 aa9.9□□□□□ -0.82
SPTLC1P3-201ENST00000403408 TET2Q6N021 2002 aaPredicted RBP9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 KPNA4O00629 521 aaPredicted RBP9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 GPR137BO60478 399 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ANP32DO95626 131 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CYB5R3P00387 301 aaPredicted RBP9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 IGHV4-59P01825 116 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 IGHG1P01857 330 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms