RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 CSNK1A1LQ8N752 337 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 OR4D6Q8NGJ1 314 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 SLC2A12Q8TD20 617 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 TAAR8Q969N4 342 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 OR2A7Q96R45 310 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.51□□□□□ -1.05
COL28A1-201ENST00000399429 PHPT1Q9NRX4 125 aaPredicted RBP8.51□□□□□ -1.05
COL28A1-201ENST00000399429 MRPS18AQ9NVS2 196 aaKnown RBP8.51□□□□□ -1.05
COL28A1-201ENST00000399429 TREM2Q9NZC2 230 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 KCNK7Q9Y2U2 307 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 A0A1B0GTH9 108 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 TMEM212A6NML5 194 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 C1QTNF3-AMACRE9PGA6 284 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 PEX12O00623 359 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 FBP1P09467 338 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 HSD11B1P28845 292 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 SULT1A1P50225 295 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 ACSM1Q08AH1 577 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 MOB3CQ70IA8 216 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 TIPARPQ7Z3E1 657 aaKnown RBP8.51□□□□□ -1.05
COL28A1-201ENST00000399429 TGIF2LXQ8IUE1 241 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 ZNF683Q8IZ20 524 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 TMEM104Q8NE00 496 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 LAT2Q9GZY6 243 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 SLCO5A1Q9H2Y9 848 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 FKRPQ9H9S5 495 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 EHFQ9NZC4 300 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 LPAR3Q9UBY5 353 aa8.51□□□□□ -1.05
COL28A1-201ENST00000399429 DICER1Q9UPY3 1922 aaKnown RBP8.5□□□□□ -1.05
COL28A1-201ENST00000399429 SULT2B1O00204 365 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 DFFBO76075 338 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 JTBO76095 146 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 FGF7P21781 194 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 DDTP30046 118 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 HRH1P35367 487 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 RPL29P47914 159 aaKnown RBP8.5□□□□□ -1.05
COL28A1-201ENST00000399429 TOMM34Q15785 309 aaPredicted RBP8.5□□□□□ -1.05
COL28A1-201ENST00000399429 ZNF805Q5CZA5 627 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 RPL7L1Q6DKI1 246 aaKnown RBP8.5□□□□□ -1.05
COL28A1-201ENST00000399429 TMEM182Q6ZP80 229 aaPredicted RBP8.5□□□□□ -1.05
COL28A1-201ENST00000399429 ASPGQ86U10 573 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 OR2AJ1Q8NGZ0 328 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 ASB13Q8WXK3 278 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 RBM14Q96PK6 669 aaKnown RBP8.5□□□□□ -1.05
COL28A1-201ENST00000399429 NAA11Q9BSU3 229 aaPredicted RBP8.5□□□□□ -1.05
COL28A1-201ENST00000399429 ADGRL4Q9HBW9 690 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 DCAF16Q9NXF7 216 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 TNFSF18Q9UNG2 199 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 RHBDD3Q9Y3P4 386 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 B4GALT2O60909 372 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 CRTAPO75718 401 aaPredicted RBP8.5□□□□□ -1.05
COL28A1-201ENST00000399429 RPL12P30050 165 aaKnown RBP8.5□□□□□ -1.05
COL28A1-201ENST00000399429 RAB1AP62820 205 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 HTRA3P83110 453 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 FAM110CQ1W6H9 321 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 FAM111BQ6SJ93 734 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 MEX3BQ6ZN04 569 aaKnown RBP8.5□□□□□ -1.05
COL28A1-201ENST00000399429 LSRQ86X29 649 aaPredicted RBP8.5□□□□□ -1.05
COL28A1-201ENST00000399429 DIO2Q92813 273 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 URM1Q9BTM9 101 aaKnown RBP8.5□□□□□ -1.05
COL28A1-201ENST00000399429 ZDHHC5Q9C0B5 715 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 BCL2L10Q9HD36 194 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 DUSP11O75319 330 aaKnown RBP8.5□□□□□ -1.05
COL28A1-201ENST00000399429 ACTL6AO96019 429 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 TYRP1P17643 537 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 MPGP29372 298 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 PRPS1P60891 318 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 ZNF85Q03923 595 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 MEP1BQ16820 701 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 SLC22A6Q4U2R8 563 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 C9orf131Q5VYM1 1079 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 FJX1Q86VR8 437 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 MISPQ8IVT2 679 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 FAM185AQ8N0U4 392 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 WBP2Q969T9 261 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 HIST1H2BAQ96A08 127 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 SLC35A4Q96G79 324 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 IL17BQ9UHF5 180 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 HHLA2Q9UM44 414 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 MOKQ9UQ07 419 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 PCDHGA1Q9Y5H4 931 aa8.5□□□□□ -1.05
COL28A1-201ENST00000399429 ZNF724A8MTY0 619 aa8.49□□□□□ -1.05
COL28A1-201ENST00000399429 SEC14L6B5MCN3 397 aa8.49□□□□□ -1.05
COL28A1-201ENST00000399429 CCL16O15467 120 aa8.49□□□□□ -1.05
COL28A1-201ENST00000399429 RBMXL2O75526 392 aaKnown RBP8.49□□□□□ -1.05
COL28A1-201ENST00000399429 F11P03951 625 aa8.49□□□□□ -1.05
COL28A1-201ENST00000399429 MMP7P09237 267 aaPredicted RBP8.49□□□□□ -1.05
COL28A1-201ENST00000399429 SLC6A9P48067 706 aa8.49□□□□□ -1.05
COL28A1-201ENST00000399429 SURF2Q15527 256 aaPredicted RBP8.49□□□□□ -1.05
COL28A1-201ENST00000399429 VWA2Q5GFL6 755 aa8.49□□□□□ -1.05
COL28A1-201ENST00000399429 SULF2Q8IWU5 870 aa8.49□□□□□ -1.05
COL28A1-201ENST00000399429 OR5AP2Q8NGF4 316 aa8.49□□□□□ -1.05
COL28A1-201ENST00000399429 SLC22A12Q96S37 553 aa8.49□□□□□ -1.05
COL28A1-201ENST00000399429 MTIF3Q9H2K0 278 aaKnown RBP8.49□□□□□ -1.05
COL28A1-201ENST00000399429 GDF2Q9UK05 429 aaPredicted RBP8.49□□□□□ -1.05
COL28A1-201ENST00000399429 COLEC10Q9Y6Z7 277 aa8.49□□□□□ -1.05
COL28A1-201ENST00000399429 OR2M5A3KFT3 312 aa8.49□□□□□ -1.05
COL28A1-201ENST00000399429 PKIAP61925 76 aa8.49□□□□□ -1.05
COL28A1-201ENST00000399429 COL13A1Q5TAT6 717 aaPredicted RBP8.49□□□□□ -1.05
COL28A1-201ENST00000399429 C1orf87Q8N0U7 546 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms