RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 HIPK1Q86Z02 1210 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 CLDN22Q8N7P3 220 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 CPEB3Q8NE35 698 aaKnown RBP12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 UBASH3BQ8TF42 649 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 NSMCE2Q96MF7 247 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 CDRT15Q96T59 188 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 SYT3Q9BQG1 590 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 FUZQ9BT04 418 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 WACQ9BTA9 647 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 BPESC1Q9GZL8 116 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 TMEM160Q9NX00 188 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 REV1Q9UBZ9 1251 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 ADAM18Q9Y3Q7 739 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 MALRD1Q5VYJ5 2156 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 XKRYO14609 159 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 ARPC2O15144 300 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 PTP4A3O75365 173 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 FAM157BP0CG42 384 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 STOMP27105 288 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 LAP3P28838 519 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 SDHAP31040 664 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 UCP2P55851 309 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 KLF3P57682 345 aaPredicted RBP12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 SELENOVP59797 346 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 PCBD1P61457 104 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 SEC23BQ15437 767 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 MESTQ5EB52 335 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 CYB5R2Q6BCY4 276 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 GPR139Q6DWJ6 353 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 SYT9Q86SS6 491 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 RSRC1Q96IZ7 334 aaKnown RBP12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 POM121L2Q96KW2 1035 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 Q96M85 177 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 ZNF570Q96NI8 536 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 TPK1Q9H3S4 243 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 NRIP3Q9NQ35 241 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 MYEF2Q9P2K5 600 aaKnown RBP12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 DUSP13Q9UII6 198 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 GPR160Q9UJ42 338 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 ADAM21Q9UKJ8 722 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 FZR1Q9UM11 496 aa12.76□□□□□ -0.37
SMIM11A-203ENST00000399299 COL6A5A8TX70 2615 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 IGHV4-61A0A0C4DH41 118 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 A0A1W2PPL8 197 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 PRSS37A4D1T9 235 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 ICMTO60725 284 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 DIRAS1O95057 198 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 LCKP06239 509 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 TACSTD2P09758 323 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 APEHP13798 732 aaKnown RBP12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 ZNF23P17027 643 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 MSR1P21757 451 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 ALDH3B1P43353 468 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 PSG4Q00888 419 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 RIN1Q13671 783 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 UNQ6126/PRO20091Q6UXV3 157 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 C1orf174Q8IYL3 243 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 ALDH16A1Q8IZ83 802 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 DEFB107AQ8IZN7 70 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 SYNPRQ8TBG9 265 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 C11orf40Q8WZ69 217 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 MCUR1Q96AQ8 359 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 OR2H1Q9GZK4 316 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 POLE4Q9NR33 117 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 SLCO1C1Q9NYB5 712 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 AURKCQ9UQB9 309 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 TIMM10BQ9Y5J6 103 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 V9GYQ6 96 aa12.75□□□□□ -0.37
SMIM11A-203ENST00000399299 TEX13CA0A0J9YWL9 993 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 A0A1W2PPW3 197 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 C12orf71A8MTZ7 269 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 H7C1C5 153 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 GADD45GO95257 159 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 TXNDC12O95881 172 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 FABP3P05413 133 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 ZNF16P17020 682 aaPredicted RBP12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 MSX2P35548 267 aaPredicted RBP12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 GDI2P50395 445 aaKnown RBP12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 FXYD6P3P58550 94 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 ERVS71-1P61550 626 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 LCN6P62502 163 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 MRPS11P82912 194 aaKnown RBP12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 MXRA7P84157 204 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 KRR1Q13601 381 aaKnown RBP12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 ENDOGQ14249 297 aaKnown RBP12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 MAD2L1BPQ15013 274 aaPredicted RBP12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 MOGQ16653 247 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 NKPD1Q17RQ9 610 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 THSD4Q6ZMP0 1018 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 DPY19L2P2Q6ZN68 376 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 ADCK1Q86TW2 530 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 OR52J3Q8NH60 311 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 AKR7LQ8NHP1 331 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 RASD2Q96D21 266 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 CCT8L2Q96SF2 557 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 ZNF416Q9BWM5 594 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 WNT5BQ9H1J7 359 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 OR51B6Q9H340 312 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 IL1RAPQ9NPH3 570 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 VSX1Q9NZR4 365 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms