RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 FPR2P25090 351 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 RPL4P36578 427 aaKnown RBP13.99□□□□□ -0.17
DDR1-229ENST00000396342 RPL27P61353 136 aaKnown RBP13.99□□□□□ -0.17
DDR1-229ENST00000396342 MSMPQ1L6U9 139 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 CYBRD1Q53TN4 286 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 RABL3Q5HYI8 236 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 AVPI1Q5T686 147 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 DCAF12L2Q5VW00 463 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 THSD4Q6ZMP0 1018 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 ARPINQ7Z6K5 226 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 CYP4Z1Q86W10 505 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 NKAIN4Q8IVV8 208 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 BPIFB2Q8N4F0 458 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 OR2T12Q8NG77 320 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 OR4D11Q8NGI4 311 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 GCDHQ92947 438 aaPredicted RBP13.99□□□□□ -0.17
DDR1-229ENST00000396342 YIPF5Q969M3 257 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 BPIFA2Q96DR5 249 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 COG8Q96MW5 612 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 MRPL13Q9BYD1 178 aaKnown RBP13.99□□□□□ -0.17
DDR1-229ENST00000396342 ZDHHC8Q9ULC8 765 aa13.99□□□□□ -0.17
DDR1-229ENST00000396342 NDRG4Q9ULP0 352 aaKnown RBP13.99□□□□□ -0.17
DDR1-229ENST00000396342 FAM157AC9JC47 383 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 H3BSA7 217 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 SURF4O15260 269 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 TIMM8AO60220 97 aaPredicted RBP13.98□□□□□ -0.17
DDR1-229ENST00000396342 LYPD3O95274 346 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 SLC2A10O95528 541 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 THY1P04216 161 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 IFNW1P05000 195 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 ZNF32P17041 273 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 TUBG1P23258 451 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 CDAP32320 146 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 OR1E2P47887 323 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 CTXN1P60606 82 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 FAM27BQ5VT28 67 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 OAFQ86UD1 273 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 MEX3DQ86XN8 651 aaKnown RBP13.98□□□□□ -0.17
DDR1-229ENST00000396342 PAQR4Q8N4S7 273 aaPredicted RBP13.98□□□□□ -0.17
DDR1-229ENST00000396342 ABHD4Q8TB40 342 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 NANPQ8TBE9 248 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 C10orf82Q8WW14 230 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 LIPHQ8WWY8 451 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 ZMYND19Q96E35 227 aaPredicted RBP13.98□□□□□ -0.17
DDR1-229ENST00000396342 PRRC1Q96M27 445 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 PRSS27Q9BQR3 290 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 WACQ9BTA9 647 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 RBM4Q9BWF3 364 aaKnown RBP13.98□□□□□ -0.17
DDR1-229ENST00000396342 RACGAP1Q9H0H5 632 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 KRCC1Q9NPI7 259 aaPredicted RBP13.98□□□□□ -0.17
DDR1-229ENST00000396342 TUBG2Q9NRH3 451 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 GRHPRQ9UBQ7 328 aa13.98□□□□□ -0.17
DDR1-229ENST00000396342 LOC100653049A0A140TA62 436 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 ELOVL7A1L3X0 281 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 EFCAB9A8MZ26 197 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 NDUFAB1O14561 156 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 SHOX2O60902 331 aaPredicted RBP13.97□□□□□ -0.17
DDR1-229ENST00000396342 GMNNO75496 209 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 RP2O75695 350 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 KRT34O76011 436 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 NCR1O76036 304 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 CST2P09228 141 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 EPHA1P21709 976 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 MSR1P21757 451 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 KDELR2P33947 212 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 LIMS1P48059 325 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 PPP1CBP62140 327 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 ERVK-25P63136 954 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 LAPTM4AQ15012 233 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 TRAM2Q15035 370 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 SPATA46Q5T0L3 261 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 ARMC4Q5T2S8 1044 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 FKBP9P1Q75LS8 142 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 WDFY1Q8IWB7 410 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 C3orf56Q8N813 242 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 NPEPL1Q8NDH3 523 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 MOSPD2Q8NHP6 518 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 SEPHS2Q99611 448 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 UBAP1Q9NZ09 502 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 WIPI2Q9Y4P8 454 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 CAPN7Q9Y6W3 813 aa13.97□□□□□ -0.17
DDR1-229ENST00000396342 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.97□□□□□ -0.171e-7■■■□□ 17.9
DDR1-229ENST00000396342 FAM220BPB1ANY3 271 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 ZNF682O95780 498 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 ABHD16AO95870 558 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 MMP7P09237 267 aaPredicted RBP13.96□□□□□ -0.17
DDR1-229ENST00000396342 TNFRSF1AP19438 455 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 TNFRSF1BP20333 461 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 SLC9A3P48764 834 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 ERVS71-1P61550 626 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 LMO4P61968 165 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 SELENOWP63302 87 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 RUNX1T1Q06455 604 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 SCRN3Q0VDG4 424 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 MBNL2Q5VZF2 373 aaKnown RBP13.96□□□□□ -0.17
DDR1-229ENST00000396342 ZNF730Q6ZMV8 503 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 SYT9Q86SS6 491 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 CALHM3Q86XJ0 350 aa13.96□□□□□ -0.17
DDR1-229ENST00000396342 RNF113BQ8IZP6 322 aaKnown RBP13.96□□□□□ -0.17
DDR1-229ENST00000396342 AKR7LQ8NHP1 331 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms