RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SLC37A3Q8NCC5 494 aa17.29■□□□□ 0.36
SNCA-203ENST00000394986 ICA1LQ8NDH6 482 aa17.29■□□□□ 0.36
SNCA-203ENST00000394986 FBXW5Q969U6 566 aa17.29■□□□□ 0.36
SNCA-203ENST00000394986 CENPNQ96H22 339 aaPredicted RBP17.29■□□□□ 0.36
SNCA-203ENST00000394986 MOV10Q9HCE1 1003 aaKnown RBP17.29■□□□□ 0.36
SNCA-203ENST00000394986 CISD1Q9NZ45 108 aaKnown RBP17.29■□□□□ 0.36
SNCA-203ENST00000394986 OAZ3Q9UMX2 235 aa17.29■□□□□ 0.36
SNCA-203ENST00000394986 ATP23Q9Y6H3 246 aa17.29■□□□□ 0.36
SNCA-203ENST00000394986 ANKRD17O75179 2603 aaKnown RBP17.28■□□□□ 0.36
SNCA-203ENST00000394986 IGLV1-36A0A0B4J1U3 117 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 IGHV2OR16-5A0A0B4J2B6 119 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 FAM171A2A8MVW0 826 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 E7EQL1 145 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 MGRN1O60291 552 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 MITFO75030 526 aaPredicted RBP17.28■□□□□ 0.36
SNCA-203ENST00000394986 CD53P19397 219 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 MSR1P21757 451 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 PAX7P23759 505 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 CENPAP49450 140 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 FAM27BQ5VT28 67 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 TMEM53Q6P2H8 277 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.28■□□□□ 0.36
SNCA-203ENST00000394986 ZDHHC13Q8IUH4 622 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 SNX18Q96RF0 628 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 DDOQ99489 341 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 KCNS3Q9BQ31 491 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 ZNF416Q9BWM5 594 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 PAPOLBQ9NRJ5 636 aaKnown RBP17.28■□□□□ 0.36
SNCA-203ENST00000394986 B9D1Q9UPM9 204 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 BAIAP2Q9UQB8 552 aa17.28■□□□□ 0.36
SNCA-203ENST00000394986 CRYAAP02489 173 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 ZNF32P17041 273 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 CRABP1P29762 137 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 GUCA1AP43080 201 aaPredicted RBP17.27■□□□□ 0.35
SNCA-203ENST00000394986 CRMP1Q14194 572 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 GINS1Q14691 196 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 MEP1BQ16820 701 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 ACSM5Q6NUN0 579 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 ZFP1Q6P2D0 407 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 C20orf204Q6ZNR8 217 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 GLB1L2Q8IW92 636 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 DEPDC4Q8N2C3 294 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 SVOPLQ8N434 492 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 ZNF611Q8N823 705 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 OR9Q1Q8NGQ5 310 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 GABARAPL1Q9H0R8 117 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 KCNN2Q9H2S1 579 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 CCNB1IP1Q9NPC3 277 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 ITGB1BP2Q9UKP3 347 aa17.27■□□□□ 0.35
SNCA-203ENST00000394986 SOD3P08294 240 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 CST2P09228 141 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 GAAP10253 952 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 CCL2P13500 99 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 DNASE1P24855 282 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 PYCR1P32322 319 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 PABPC1L2AQ5JQF8 200 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 TMEM236Q5W0B7 351 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 DNM1P34Q6PK57 102 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 AKR7LQ8NHP1 331 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 ZNRF4Q8WWF5 429 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 C11orf40Q8WZ69 217 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 CCL19Q99731 98 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 S100A14Q9HCY8 104 aa17.26■□□□□ 0.35
SNCA-203ENST00000394986 RAI1Q7Z5J4 1906 aaPredicted RBP17.25■□□□□ 0.35
SNCA-203ENST00000394986 SERPINA5P05154 406 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 GRK5P34947 590 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 PSG4Q00888 419 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 HSF2Q03933 536 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 HGFACQ04756 655 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 SLC27A4Q6P1M0 643 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 DPPA2Q7Z7J5 298 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 PAQR4Q8N4S7 273 aaPredicted RBP17.25■□□□□ 0.35
SNCA-203ENST00000394986 CPEB3Q8NE35 698 aaKnown RBP17.25■□□□□ 0.35
SNCA-203ENST00000394986 OR51L1Q8NGJ5 315 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 SMAP2Q8WU79 429 aaPredicted RBP17.25■□□□□ 0.35
SNCA-203ENST00000394986 DNAJC9Q8WXX5 260 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 RBM4Q9BWF3 364 aaKnown RBP17.25■□□□□ 0.35
SNCA-203ENST00000394986 RACGAP1Q9H0H5 632 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 WNT5BQ9H1J7 359 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 CMC2Q9NRP2 79 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 KRT84Q9NSB2 600 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 KLHL21Q9UJP4 597 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 LAMP3Q9UQV4 416 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 FKBP7Q9Y680 259 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 CCDC168Q8NDH2 2452 aa17.25■□□□□ 0.35
SNCA-203ENST00000394986 ERICH4A6NGS2 130 aa17.24■□□□□ 0.35
SNCA-203ENST00000394986 GYPBP06028 91 aa17.24■□□□□ 0.35
SNCA-203ENST00000394986 DANCRP0C864 163 aa17.24■□□□□ 0.35
SNCA-203ENST00000394986 CLUP10909 449 aa17.24■□□□□ 0.35
SNCA-203ENST00000394986 APEX1P27695 318 aaKnown RBP17.24■□□□□ 0.35
SNCA-203ENST00000394986 KDM4DQ6B0I6 523 aa17.24■□□□□ 0.35
SNCA-203ENST00000394986 KRT80Q6KB66 452 aa17.24■□□□□ 0.35
SNCA-203ENST00000394986 LYPD4Q6UWN0 246 aa17.24■□□□□ 0.35
SNCA-203ENST00000394986 ZBTB46Q86UZ6 589 aa17.24■□□□□ 0.35
SNCA-203ENST00000394986 SLC30A7Q8NEW0 376 aa17.24■□□□□ 0.35
SNCA-203ENST00000394986 NINJ1Q92982 152 aa17.24■□□□□ 0.35
SNCA-203ENST00000394986 HCAR1Q9BXC0 346 aa17.24■□□□□ 0.35
SNCA-203ENST00000394986 OR2H1Q9GZK4 316 aa17.24■□□□□ 0.35
SNCA-203ENST00000394986 MED20Q9H944 212 aa17.24■□□□□ 0.35
SNCA-203ENST00000394986 TMEFF2Q9UIK5 374 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms