RNA–Protein interactions for RNA: ENST00000394243.5

SYNPO-202, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 7,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-202ENST00000394243 TMEM99Q8N816 258 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 CT45A3Q8NHU0 189 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 PIGTQ969N2 578 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 ZNF566Q969W8 418 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 C16orf70Q9BSU1 422 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 POMT1Q9Y6A1 747 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 SERTM2A0A1B0GWG4 89 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 H0YIV9 168 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 PRAMEF4O60810 478 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 ATXN1LP0C7T5 689 aaKnown RBP10.9□□□□□ -0.66
SYNPO-202ENST00000394243 ADRA2CP18825 462 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 PCBD1P61457 104 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 CDK5Q00535 292 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 LANCL3Q6ZV70 420 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 PLXDC1Q8IUK5 500 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 PLA2G12AQ9BZM1 189 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 FAM155AB1AL88 458 aaPredicted RBP10.9□□□□□ -0.66
SYNPO-202ENST00000394243 GPR31O00270 319 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 GLCEO94923 617 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 ZNF133P52736 654 aaPredicted RBP10.9□□□□□ -0.66
SYNPO-202ENST00000394243 LRRTM3Q86VH5 581 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 OPALINQ96PE5 141 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 TEAD3Q99594 435 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 ACER3Q9NUN7 267 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 A0A0J9YY10 115 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 LY86O95711 162 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 GPX2P18283 190 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 ADGRG3Q86Y34 549 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 SCMH1Q96GD3 660 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 TAS2R4Q9NYW5 299 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 GNG12Q9UBI6 72 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 GPR75O95800 540 aa10.9□□□□□ -0.67
SYNPO-202ENST00000394243 CD300CQ08708 224 aa10.9□□□□□ -0.67
SYNPO-202ENST00000394243 C9orf135Q5VTT2 229 aa10.9□□□□□ -0.67
SYNPO-202ENST00000394243 THNSL2Q86YJ6 484 aa10.9□□□□□ -0.67
SYNPO-202ENST00000394243 LHX4Q969G2 390 aa10.9□□□□□ -0.67
SYNPO-202ENST00000394243 SLC6A18Q96N87 628 aa10.9□□□□□ -0.67
SYNPO-202ENST00000394243 RARRES3Q9UL19 164 aa10.9□□□□□ -0.67
SYNPO-202ENST00000394243 A0A1B0GWA3 101 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 SLC5A10A0PJK1 596 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 UBE2G1P62253 170 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 ARL16Q0P5N6 197 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 ETFDHQ16134 617 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 OR13C5Q8NGS8 318 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 STT3BQ8TCJ2 826 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 AMDHD1Q96NU7 426 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 TECTBQ96PL2 329 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 A0A087X0M5 115 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 TRAV34A0A0B4J273 112 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 A0A1B0GX30 115 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 AQP7P3A6NL99 342 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 E5RGE8 158 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 CIDEAO60543 219 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 AQP8O94778 261 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 PI3P19957 117 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 DTYMKP23919 212 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 ACSM5Q6NUN0 579 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 ZNF66Q6ZN08 573 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 OR51H1Q8NH63 302 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 RSRP1Q9BUV0 290 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 GABARAPL3Q9BY60 117 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 NENFQ9UMX5 172 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 NSG2Q9Y328 171 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 NR0B2Q15466 257 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 CTF1Q16619 201 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 SLC35D3Q5M8T2 416 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 OR2A2Q6IF42 318 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 PCDHB10Q9UN67 800 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 FZD9O00144 591 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 ENSAO43768 121 aaKnown RBP10.89□□□□□ -0.67
SYNPO-202ENST00000394243 CHRM2P08172 466 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 DCTDP32321 178 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 SLC14A2Q15849 920 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 ZNF2Q9BSG1 426 aaPredicted RBP10.89□□□□□ -0.67
SYNPO-202ENST00000394243 FTSJ1Q9UET6 329 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 CD3DP04234 171 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 IHHQ14623 411 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 SPANXN5Q5MJ07 72 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 TMEM37Q8WXS4 190 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 ZNF775Q96BV0 537 aaPredicted RBP10.89□□□□□ -0.67
SYNPO-202ENST00000394243 SOX7Q9BT81 388 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 GABARAPL1Q9H0R8 117 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 FLVCR1Q9Y5Y0 555 aa10.89□□□□□ -0.67
SYNPO-202ENST00000394243 MFAP5Q13361 173 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 RPL7L1Q6DKI1 246 aaKnown RBP10.88□□□□□ -0.67
SYNPO-202ENST00000394243 SLC16A14Q7RTX9 510 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 NAXDQ8IW45 347 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 MMP21Q8N119 569 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 FAM26EQ8N5C1 309 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 PLEKHF2Q9H8W4 249 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 SLC2A9Q9NRM0 540 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 SLC2A10O95528 541 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 EEF1A2Q05639 463 aaKnown RBP10.88□□□□□ -0.67
SYNPO-202ENST00000394243 MZT1Q08AG7 82 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 KIR2DS3Q14952 304 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 Q3ZCU0 254 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 TMEM201Q5SNT2 666 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 ADIPOR1Q96A54 375 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 KIRREL1Q96J84 757 aa10.88□□□□□ -0.67
SYNPO-202ENST00000394243 GLIPR2Q9H4G4 154 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms