RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 GPR139Q6DWJ6 353 aa26.46■■□□□ 1.83
CMTM4-202ENST00000394106 SMARCD3Q6STE5 483 aa26.46■■□□□ 1.83
CMTM4-202ENST00000394106 FOXL2NBQ6ZUU3 175 aa26.46■■□□□ 1.83
CMTM4-202ENST00000394106 DHFR2Q86XF0 187 aa26.46■■□□□ 1.83
CMTM4-202ENST00000394106 AKR7LQ8NHP1 331 aa26.46■■□□□ 1.83
CMTM4-202ENST00000394106 FANK1Q8TC84 345 aa26.46■■□□□ 1.83
CMTM4-202ENST00000394106 GPX7Q96SL4 187 aaPredicted RBP26.46■■□□□ 1.83
CMTM4-202ENST00000394106 SOCS2O14508 198 aa26.45■■□□□ 1.82
CMTM4-202ENST00000394106 CST2P09228 141 aa26.45■■□□□ 1.82
CMTM4-202ENST00000394106 MSR1P21757 451 aa26.45■■□□□ 1.82
CMTM4-202ENST00000394106 CCNOP22674 350 aa26.45■■□□□ 1.82
CMTM4-202ENST00000394106 PCSK6P29122 969 aa26.45■■□□□ 1.82
CMTM4-202ENST00000394106 KRTAP1-1Q07627 177 aa26.45■■□□□ 1.82
CMTM4-202ENST00000394106 MTX3Q5HYI7 312 aa26.45■■□□□ 1.82
CMTM4-202ENST00000394106 DPY19L2P2Q6ZN68 376 aa26.45■■□□□ 1.82
CMTM4-202ENST00000394106 LRP11Q86VZ4 500 aa26.45■■□□□ 1.82
CMTM4-202ENST00000394106 FOXN4Q96NZ1 517 aa26.45■■□□□ 1.82
CMTM4-202ENST00000394106 MUC13Q9H3R2 512 aa26.45■■□□□ 1.82
CMTM4-202ENST00000394106 RERGLQ9H628 205 aa26.45■■□□□ 1.82
CMTM4-202ENST00000394106 DUSP13Q9UII6 198 aa26.45■■□□□ 1.82
CMTM4-202ENST00000394106 AHCYL1O43865 530 aa26.44■■□□□ 1.82
CMTM4-202ENST00000394106 SNAP29O95721 258 aa26.44■■□□□ 1.82
CMTM4-202ENST00000394106 TP53P04637 393 aaPredicted RBP26.44■■□□□ 1.82
CMTM4-202ENST00000394106 STOMP27105 288 aa26.44■■□□□ 1.82
CMTM4-202ENST00000394106 EVX1P49640 407 aa26.44■■□□□ 1.82
CMTM4-202ENST00000394106 PSG4Q00888 419 aa26.44■■□□□ 1.82
CMTM4-202ENST00000394106 TRIM25Q14258 630 aaKnown RBP26.44■■□□□ 1.82
CMTM4-202ENST00000394106 RGS7BPQ6MZT1 257 aaPredicted RBP26.44■■□□□ 1.82
CMTM4-202ENST00000394106 ICA1LQ8NDH6 482 aa26.44■■□□□ 1.82
CMTM4-202ENST00000394106 BCAS4Q8TDM0 211 aa26.44■■□□□ 1.82
CMTM4-202ENST00000394106 OR2H1Q9GZK4 316 aa26.44■■□□□ 1.82
CMTM4-202ENST00000394106 TPK1Q9H3S4 243 aa26.44■■□□□ 1.82
CMTM4-202ENST00000394106 EMC7Q9NPA0 242 aa26.44■■□□□ 1.82
CMTM4-202ENST00000394106 POLE4Q9NR33 117 aa26.44■■□□□ 1.82
CMTM4-202ENST00000394106 PRPF19Q9UMS4 504 aaKnown RBP26.44■■□□□ 1.82
CMTM4-202ENST00000394106 NIPBLQ6KC79 2804 aaeCLIP26.44■■□□□ 1.82
CMTM4-202ENST00000394106 CSPG4Q6UVK1 2322 aa26.44■■□□□ 1.82
CMTM4-202ENST00000394106 TCRBV5S2A0A599 114 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 M0R233 179 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 SYNGR3O43761 229 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 PPP1R3DO95685 299 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 SCG5P05408 212 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 LCKP06239 509 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 FPR3P25089 353 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 IFNGR2P38484 337 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 RPS6KA3P51812 740 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 MS4A2Q01362 244 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 LCN8Q6JVE9 175 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 CCDC124Q96CT7 223 aaKnown RBP26.43■■□□□ 1.82
CMTM4-202ENST00000394106 ZNF416Q9BWM5 594 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 SYT4Q9H2B2 425 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 TAS2R1Q9NYW7 299 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 MYEF2Q9P2K5 600 aaKnown RBP26.43■■□□□ 1.82
CMTM4-202ENST00000394106 REV1Q9UBZ9 1251 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 TIMM10BQ9Y5J6 103 aa26.43■■□□□ 1.82
CMTM4-202ENST00000394106 A0A096LNT2 108 aa26.42■■□□□ 1.82
CMTM4-202ENST00000394106 A0A1W2PPW3 197 aa26.42■■□□□ 1.82
CMTM4-202ENST00000394106 IMPA2O14732 288 aa26.42■■□□□ 1.82
CMTM4-202ENST00000394106 IGFBP1P08833 259 aaPredicted RBP26.42■■□□□ 1.82
CMTM4-202ENST00000394106 CTLA4P16410 223 aa26.42■■□□□ 1.82
CMTM4-202ENST00000394106 ALDH3B1P43353 468 aa26.42■■□□□ 1.82
CMTM4-202ENST00000394106 PCBD1P61457 104 aa26.42■■□□□ 1.82
CMTM4-202ENST00000394106 ERVS71-1P61550 626 aa26.42■■□□□ 1.82
CMTM4-202ENST00000394106 ENDOGQ14249 297 aaKnown RBP26.42■■□□□ 1.82
CMTM4-202ENST00000394106 MAD2L1BPQ15013 274 aaPredicted RBP26.42■■□□□ 1.82
CMTM4-202ENST00000394106 UGT2A3Q6UWM9 527 aa26.42■■□□□ 1.82
CMTM4-202ENST00000394106 NEU4Q8WWR8 484 aaPredicted RBP26.42■■□□□ 1.82
CMTM4-202ENST00000394106 CLPTM1LQ96KA5 538 aa26.42■■□□□ 1.82
CMTM4-202ENST00000394106 PIMREGQ9BSJ6 248 aa26.42■■□□□ 1.82
CMTM4-202ENST00000394106 WNT5BQ9H1J7 359 aa26.42■■□□□ 1.82
CMTM4-202ENST00000394106 OR52D1Q9H346 318 aa26.42■■□□□ 1.82
CMTM4-202ENST00000394106 MYOZ1Q9NP98 299 aaPredicted RBP26.42■■□□□ 1.82
CMTM4-202ENST00000394106 TLN2Q9Y4G6 2542 aa26.42■■□□□ 1.82
CMTM4-202ENST00000394106 NSD1Q96L73 2696 aaPredicted RBP26.42■■□□□ 1.82
CMTM4-202ENST00000394106 C5orf49A4QMS7 147 aa26.41■■□□□ 1.82
CMTM4-202ENST00000394106 C12orf71A8MTZ7 269 aa26.41■■□□□ 1.82
CMTM4-202ENST00000394106 INAFM1C9JVW0 142 aa26.41■■□□□ 1.82
CMTM4-202ENST00000394106 SLC16A7O60669 478 aa26.41■■□□□ 1.82
CMTM4-202ENST00000394106 KRT36O76013 467 aa26.41■■□□□ 1.82
CMTM4-202ENST00000394106 RAD52P43351 418 aa26.41■■□□□ 1.82
CMTM4-202ENST00000394106 GDI2P50395 445 aaKnown RBP26.41■■□□□ 1.82
CMTM4-202ENST00000394106 UCP2P55851 309 aa26.41■■□□□ 1.82
CMTM4-202ENST00000394106 PPP2R2BQ00005 443 aa26.41■■□□□ 1.82
CMTM4-202ENST00000394106 PTCHD4Q6ZW05 846 aa26.41■■□□□ 1.82
CMTM4-202ENST00000394106 TRPM8Q7Z2W7 1104 aa26.41■■□□□ 1.82
CMTM4-202ENST00000394106 ADCK1Q86TW2 530 aa26.41■■□□□ 1.82
CMTM4-202ENST00000394106 GNPDA2Q8TDQ7 276 aa26.41■■□□□ 1.82
CMTM4-202ENST00000394106 ERMAPQ96PL5 475 aaPredicted RBP26.41■■□□□ 1.82
CMTM4-202ENST00000394106 LYVE1Q9Y5Y7 322 aa26.41■■□□□ 1.82
CMTM4-202ENST00000394106 TNFRSF11BO00300 401 aa26.4■■□□□ 1.82
CMTM4-202ENST00000394106 DAOP14920 347 aa26.4■■□□□ 1.82
CMTM4-202ENST00000394106 SLC6A6P31641 620 aa26.4■■□□□ 1.82
CMTM4-202ENST00000394106 RFX4Q33E94 735 aa26.4■■□□□ 1.82
CMTM4-202ENST00000394106 ZNF774Q6NX45 483 aa26.4■■□□□ 1.82
CMTM4-202ENST00000394106 ALDH16A1Q8IZ83 802 aa26.4■■□□□ 1.82
CMTM4-202ENST00000394106 POM121L2Q96KW2 1035 aa26.4■■□□□ 1.82
CMTM4-202ENST00000394106 THTPAQ9BU02 230 aa26.4■■□□□ 1.82
CMTM4-202ENST00000394106 BCL2L14Q9BZR8 327 aa26.4■■□□□ 1.82
CMTM4-202ENST00000394106 C1orf21Q9H246 121 aa26.4■■□□□ 1.82
CMTM4-202ENST00000394106 MAGIXQ9H6Y5 334 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms