RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 PMS2P2O95744 297 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 FBP1P09467 338 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 CSF1P09603 554 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 ST6GAL1P15907 406 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 CSF2RBP32927 897 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 NPBWR1P48145 328 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 POU3F4P49335 361 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 CXADRP78310 365 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 PCGF3Q3KNV8 242 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 FBXO42Q6P3S6 717 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 GUSBP11Q6P575 273 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 RBMS3Q6XE24 437 aaKnown RBP10.08□□□□□ -0.8
CUX1-204ENST00000393824 ZNF793Q6ZN11 406 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 ACOT7LQ6ZUV0 252 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 BEST3Q8N1M1 668 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 AMER3Q8N944 861 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 PRSS33Q8NF86 280 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 CNRIP1Q96F85 164 aaPredicted RBP10.08□□□□□ -0.8
CUX1-204ENST00000393824 PRSS27Q9BQR3 290 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 ZNF471Q9BX82 626 aaPredicted RBP10.08□□□□□ -0.8
CUX1-204ENST00000393824 KLHL31Q9H511 634 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 CES1P1Q9UKY3 287 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 SLC7A7Q9UM01 511 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 ZNF443Q9Y2A4 671 aaPredicted RBP10.08□□□□□ -0.8
CUX1-204ENST00000393824 CFAP47Q6ZTR5 3102 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 ZNF729A6NN14 1252 aaPredicted RBP10.08□□□□□ -0.8
CUX1-204ENST00000393824 ACTL6AO96019 429 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 THBS1P07996 1170 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 OR2T7P0C7T2 308 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 CLUP10909 449 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 PGDP52209 483 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 AKR1C2P52895 323 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 CLDN12P56749 244 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 AKR1C1Q04828 323 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 DEFB110Q30KQ9 67 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 AMZ1Q400G9 498 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 PLA2G2CQ5R387 149 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 C11orf87Q6NUJ2 197 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 SLC48A1Q6P1K1 146 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 TMEM71Q6P5X7 295 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 VN1R4Q7Z5H5 301 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 CCDC116Q8IYX3 515 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 BOLLQ8N9W6 283 aaKnown RBP10.08□□□□□ -0.8
CUX1-204ENST00000393824 OR1J4Q8NGS1 313 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 OR2T27Q8NH04 317 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 WNT2BQ93097 391 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 MOGAT1Q96PD6 335 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 MAP3K3Q99759 626 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 VRK1Q99986 396 aaPredicted RBP10.08□□□□□ -0.8
CUX1-204ENST00000393824 PDCD1LG2Q9BQ51 273 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 LRFN3Q9BTN0 628 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 CCDC86Q9H6F5 360 aaKnown RBP10.08□□□□□ -0.8
CUX1-204ENST00000393824 C14orf105Q9NVL8 296 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 ZFHX4Q86UP3 3567 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 A0A1B0GTI1 187 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 A0A1W2PR48 441 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 RNF222A6NCQ9 220 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 TMEM200CA6NKL6 621 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 RIIAD1A6NNX1 92 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 P2RX6O15547 441 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 XRCC3O43542 346 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 ERAL1O75616 437 aaKnown RBP10.07□□□□□ -0.8
CUX1-204ENST00000393824 CD79AP11912 226 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 MAKP20794 623 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 HIST1H1TP22492 207 aaPredicted RBP10.07□□□□□ -0.8
CUX1-204ENST00000393824 GPX4P36969 197 aaPredicted RBP10.07□□□□□ -0.8
CUX1-204ENST00000393824 CAPZBP47756 277 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 PNLIPRP2P54317 469 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 HSD17B7P56937 341 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 KIR2DS3Q14952 304 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 RNF212Q495C1 297 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 LPCAT3Q6P1A2 487 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 THSD4Q6ZMP0 1018 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 RANBP3LQ86VV4 465 aaPredicted RBP10.07□□□□□ -0.8
CUX1-204ENST00000393824 RFLNBQ8N5W9 214 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 ZNF433Q8N7K0 673 aaPredicted RBP10.07□□□□□ -0.8
CUX1-204ENST00000393824 AVL9Q8NBF6 648 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 SUMF1Q8NBK3 374 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 RPS4Y2Q8TD47 263 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 CCDC107Q8WV48 283 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 CNTNAP3BQ96NU0 1288 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 CHST6Q9GZX3 395 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 MYOZ1Q9NP98 299 aaPredicted RBP10.07□□□□□ -0.8
CUX1-204ENST00000393824 TMEM100Q9NV29 134 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 ASF1BQ9NVP2 202 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 FBXL4Q9UKA2 621 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 ITGB2P05107 769 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 FUT1P19526 365 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 SCAND1P57086 179 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 CRMP1Q14194 572 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 VWA2Q5GFL6 755 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 TEX30Q5JUR7 227 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 FRRS1Q6ZNA5 592 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 TMPRSS11FQ6ZWK6 438 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 DND1Q8IYX4 353 aaKnown RBP10.07□□□□□ -0.8
CUX1-204ENST00000393824 CDK20Q8IZL9 346 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 OR51S1Q8NGJ8 323 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 OR5M8Q8NGP6 311 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 OR4C6Q8NH72 309 aa10.07□□□□□ -0.8
CUX1-204ENST00000393824 PHOSPHO1Q8TCT1 267 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms