RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 CCDC59Q9P031 241 aaKnown RBP11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 PCDHGA3Q9Y5H0 932 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 TRGV8A0A0C4DH27 118 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 IGHV3-64DA0A0J9YX35 117 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 DHHO43323 396 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 LINC00271P0C7V0 271 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 B4GALT1P15291 398 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 S100A1P23297 94 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 CEBPGP53567 150 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 CXADRP78310 365 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 FZD5Q13467 585 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 TMPRSS11FQ6ZWK6 438 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 OR4Q3Q8NH05 313 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 CREB3L1Q96BA8 519 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 TMEM59Q9BXS4 323 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 PAQR5Q9NXK6 330 aaPredicted RBP11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 MGAT4CQ9UBM8 478 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 RALGAPA2Q2PPJ7 1873 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 KANTRA0A1W2PQU2 76 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 TCRBV16S1A1N1A0A5B0 115 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 SLC22A20A6NK97 555 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 HSPB6O14558 160 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 FZD7O75084 574 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 PAHP00439 452 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 CTSBP07858 339 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 CX3CR1P49238 355 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 TOMM34Q15785 309 aaPredicted RBP11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 YIF1BQ5BJH7 314 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 C3P1Q6ZMU1 363 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 TRILQ7L0X0 811 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 PARP16Q8N5Y8 322 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 ZNF431Q8TF32 576 aaPredicted RBP11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 CGGBP1Q9UFW8 167 aaPredicted RBP11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 PILRAQ9UKJ1 303 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 SLCO1B1Q9Y6L6 691 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 ARHGEF17Q96PE2 2063 aaPredicted RBP11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 TRDV1A0A1B0GX56 115 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 UPK1BO75841 260 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 LIPCP11150 499 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 PIPP12273 146 aaPredicted RBP11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 ZNF93P35789 620 aaPredicted RBP11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 GABRA2P47869 451 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 RGS19P49795 217 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 MAP2K6P52564 334 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 GRB2P62993 217 aaKnown RBP11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 FUT7Q11130 342 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 NUBPLQ8TB37 319 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 MMP28Q9H239 520 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 ZNF71Q9NQZ8 489 aaPredicted RBP11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 DTX4Q9Y2E6 619 aa11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 MRPS28Q9Y2Q9 187 aaKnown RBP11.86□□□□□ -0.51
PTPRN2-202ENST00000389416 DVL2O14641 736 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 CSF2RBP32927 897 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 CDK10Q15131 360 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 ZNF141Q15928 474 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 METTL9Q9H1A3 318 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 FKBP14Q9NWM8 211 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 B9D1Q9UPM9 204 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 GREB1Q4ZG55 1949 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 THSD7BQ9C0I4 1608 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 POU3F3P20264 500 aaPredicted RBP11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 PRKACBP22694 351 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 EMP3P54852 163 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 RAB2AP61019 212 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 RAB12Q6IQ22 244 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 TMEM81Q6P7N7 255 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 SYT9Q86SS6 491 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 ELMOD2Q8IZ81 293 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 BATF2Q8N1L9 274 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 DNAAF1Q8NEP3 725 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 OR51E1Q8TCB6 317 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 TMEM43Q9BTV4 400 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 CDCA4Q9BXL8 241 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 SELENOIQ9C0D9 397 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 CES1P1Q9UKY3 287 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 SLC22A13Q9Y226 551 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 ANK1P16157 1881 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 LOC107986453A0A1B0GWG9 222 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 B4DXG7 233 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 APEX1P27695 318 aaKnown RBP11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 CDAP32320 146 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 AKR1C2P52895 323 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 GP2P55259 537 aaKnown RBP11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 CEACAM16Q2WEN9 425 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 HINT2Q9BX68 163 aa11.85□□□□□ -0.51
PTPRN2-202ENST00000389416 M0R135 149 aa11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 RAB40ALP0C0E4 278 aa11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 JUNBP17275 347 aaPredicted RBP11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 SRMP19623 302 aa11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 RPS19P39019 145 aaKnown RBP11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 MTNR1BP49286 362 aa11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 MEOX1P50221 254 aa11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 RIPPLY1Q0D2K3 151 aa11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 C1QL3Q5VWW1 255 aa11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 DND1Q8IYX4 353 aaKnown RBP11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 GCNT2Q8N0V5 402 aa11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 OR5AS1Q8N127 324 aa11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 RAB40AQ8WXH6 277 aa11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 ZNF799Q96GE5 643 aa11.84□□□□□ -0.51
PTPRN2-202ENST00000389416 GPR87Q9BY21 358 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms