RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 TMEM99Q8N816 258 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 BHLHE23Q8NDY6 225 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 KIRREL1Q96J84 757 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 GABARAPL1Q9H0R8 117 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 IGFBP1P08833 259 aaPredicted RBP16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 DIO1P49895 249 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 SHEQ5VZ18 495 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 GABARAPL3Q9BY60 117 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 PPP1R14DQ9NXH3 145 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 ASH2LQ9UBL3 628 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 A0A0B4J2A0 478 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 POM121CA8CG34 1229 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 FXYD1O00168 92 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 SSX4O60224 188 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 GFERP55789 205 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 KMT5CQ86Y97 462 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 SPNS2Q8IVW8 549 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 HAS2Q92819 552 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 SHPKQ9UHJ6 478 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 ATPIF1Q9UII2 106 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 PRELID3BQ9Y3B1 194 aa16.26■□□□□ 0.19
CNTNAP3-204ENST00000377656 NHSQ6T4R5 1651 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 hCG_1809904A0A1W2PP81 198 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 A0A1W2PPE2 198 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 A0A1W2PR64 198 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 A0A1W2PRV1 198 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 QDPRP09417 244 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 FCN2Q15485 313 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 IAH1Q2TAA2 248 aaPredicted RBP16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 HEPHL1Q6MZM0 1159 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 OGFOD3Q6PK18 319 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 UBALD2Q8IYN6 164 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 TEX19Q8NA77 164 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 CDCA4Q9BXL8 241 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 OR11A1Q9GZK7 315 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 CCR6P51684 374 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 MDGA2Q7Z553 956 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 PRSS35Q8N3Z0 413 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 RNF170Q96K19 258 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 MBOAT4Q96T53 435 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 BCO1Q9HAY6 547 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 EMC7Q9NPA0 242 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 LANCL2Q9NS86 450 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 GFOD1Q9NXC2 390 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 ZNF346Q9UL40 294 aaKnown RBP16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 SLC17A4Q9Y2C5 497 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 LOC107986453A0A1B0GWG9 222 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 PHF1O43189 567 aaPredicted RBP16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 TUSC2O75896 110 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 SNRNP70P08621 437 aaKnown RBP16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 PTBP1P26599 531 aaKnown RBP eCLIP16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 OR8B8Q15620 311 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 SLC25A46Q96AG3 418 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 A0A1W2PNR3 127 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 PMS2P2O95744 297 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 ECI1P42126 302 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 CELF2-AS1Q8N7Q2 184 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 DUSP21Q9H596 190 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 DECR2Q9NUI1 292 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 NPAP1Q9NZP6 1156 aa16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 KLF13Q9Y2Y9 288 aaPredicted RBP16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 MARF1Q9Y4F3 1742 aaKnown RBP16.25■□□□□ 0.19
CNTNAP3-204ENST00000377656 NUPL2O15504 423 aaKnown RBP16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 SPINT2O43291 252 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 CLDN1O95832 211 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 PMP2P02689 132 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 APEHP13798 732 aaKnown RBP16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 IL10RAQ13651 578 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 RUNX2Q13950 521 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 PAN3Q58A45 887 aaKnown RBP16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 ATPAF1Q5TC12 328 aaPredicted RBP16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 BRICD5Q6PL45 260 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 ZNF687Q8N1G0 1237 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 CNRIP1Q96F85 164 aaPredicted RBP16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 TTC3P53804 2025 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 FITM1A5D6W6 292 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 ENSAO43768 121 aaKnown RBP16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 ICOSLGO75144 302 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 RGS11O94810 467 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 PNLIPRP2P54317 469 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 RPL18Q07020 188 aaKnown RBP16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 HTR4Q13639 388 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 CTU2Q2VPK5 515 aaKnown RBP16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 ASTLQ6HA08 431 aaPredicted RBP16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 OR4A16Q8NH70 328 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 SLAMF6Q96DU3 332 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 ZC3H12DA2A288 527 aaKnown RBP16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 ANKRD34BA5PLL1 514 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 STMND1H3BQB6 276 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 LINC01565O15544 149 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 GRPP07492 148 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 BCKDHBP21953 392 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 LYSMD2Q8IV50 215 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 SPTY2D1-AS1A0A0U1RR47 76 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 SLC2A10O95528 541 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 SOD1P00441 154 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 GUSBP08236 651 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 C11orf40Q8WZ69 217 aa16.24■□□□□ 0.19
CNTNAP3-204ENST00000377656 SPACA1Q9HBV2 294 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms