RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 ERVK-25P63136 954 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 MRPS11P82912 194 aaKnown RBP16.36■□□□□ 0.21
CBWD3-204ENST00000377349 HIST3H3Q16695 136 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 PABPC1L2AQ5JQF8 200 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 TBPL2Q6SJ96 375 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 DPPA2Q7Z7J5 298 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 RNF148Q8N7C7 305 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 OR1J2Q8NGS2 313 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 C1orf198Q9H425 327 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 LPAR2Q9HBW0 351 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 MAN2C1Q9NTJ4 1040 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 TREM2Q9NZC2 230 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 TAAR3PQ9P1P4 343 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 ZNF346Q9UL40 294 aaKnown RBP16.36■□□□□ 0.21
CBWD3-204ENST00000377349 FFAR1O14842 300 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 CLPTM1O96005 669 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 IGF2P01344 180 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 TFP02787 698 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 DRD4P21917 467 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 CFPP27918 469 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 GUCA1AP43080 201 aaPredicted RBP16.36■□□□□ 0.21
CBWD3-204ENST00000377349 PSME3P61289 254 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 FGD3Q5JSP0 725 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 SPATA46Q5T0L3 261 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 C10orf128Q5T292 105 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 C1orf229Q6ZS94 237 aaPredicted RBP16.36■□□□□ 0.21
CBWD3-204ENST00000377349 CBLL1Q75N03 491 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 AKR7LQ8NHP1 331 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 SNX33Q8WV41 574 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 CMTM5Q96DZ9 223 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 TSPAN32Q96QS1 320 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 RBP7Q96R05 134 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 NSRP1Q9H0G5 558 aaKnown RBP16.36■□□□□ 0.21
CBWD3-204ENST00000377349 SIAEQ9HAT2 523 aa16.36■□□□□ 0.21
CBWD3-204ENST00000377349 A0A0A6YYJ9 748 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 SLC22A23A1A5C7 686 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 CENPBD1B2RD01 187 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 TPD52L2O43399 206 aaKnown RBP16.35■□□□□ 0.21
CBWD3-204ENST00000377349 GMNNO75496 209 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 ZNF32P17041 273 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 MAGEB1P43366 347 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 SLC9A3P48764 834 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 TMEM33P57088 247 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 KLF3P57682 345 aaPredicted RBP16.35■□□□□ 0.21
CBWD3-204ENST00000377349 SYNPRQ8TBG9 265 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 ZFAND2BQ8WV99 257 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 LIPHQ8WWY8 451 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 ACOT11Q8WXI4 607 aaPredicted RBP16.35■□□□□ 0.21
CBWD3-204ENST00000377349 C11orf40Q8WZ69 217 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 OCEL1Q9H607 264 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 UGT2A1Q9Y4X1 527 aa16.35■□□□□ 0.21
CBWD3-204ENST00000377349 IGLV3-9A0A075B6K5 115 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 C5orf49A4QMS7 147 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 GMNCA6NCL1 334 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 AVPP01185 164 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 STOMP27105 288 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 RAD52P43351 418 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 MRPS34P82930 218 aaKnown RBP16.34■□□□□ 0.21
CBWD3-204ENST00000377349 PRKCDQ05655 676 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 TMEM154Q6P9G4 183 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 CPLX4Q7Z7G2 160 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 CPEB3Q8NE35 698 aaKnown RBP16.34■□□□□ 0.21
CBWD3-204ENST00000377349 OR1J1Q8NGS3 322 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 FAM46AQ96IP4 442 aaKnown RBP16.34■□□□□ 0.21
CBWD3-204ENST00000377349 LRRC37BQ96QE4 947 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 SEPHS2Q99611 448 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 ALG12Q9BV10 488 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 RERGLQ9H628 205 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 GRHPRQ9UBQ7 328 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 GPR160Q9UJ42 338 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 RPS6KA6Q9UK32 745 aa16.34■□□□□ 0.21
CBWD3-204ENST00000377349 FAM32AQ9Y421 112 aaKnown RBP16.34■□□□□ 0.21
CBWD3-204ENST00000377349 A0A087WUU8 490 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 NDUFAB1O14561 156 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 PPIHO43447 177 aaKnown RBP16.33■□□□□ 0.2
CBWD3-204ENST00000377349 CDC14BO60729 498 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 MMP7P09237 267 aaPredicted RBP16.33■□□□□ 0.2
CBWD3-204ENST00000377349 ZNF250P15622 560 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 LAP3P28838 519 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 GDI2P50395 445 aaKnown RBP16.33■□□□□ 0.2
CBWD3-204ENST00000377349 UCP2P55851 309 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 TAF11Q15544 211 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 NRN1LQ496H8 165 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 C12orf54Q6X4T0 127 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 HACD2Q6Y1H2 254 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 MBOAT2Q6ZWT7 520 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 NABP1Q96AH0 204 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 PLA2G12AQ9BZM1 189 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 BCL2L14Q9BZR8 327 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 NDEL1Q9GZM8 345 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 SMURF2Q9HAU4 748 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 SPAG4Q9NPE6 437 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 G6PC2Q9NQR9 355 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 EIF3KQ9UBQ5 218 aaKnown RBP16.33■□□□□ 0.2
CBWD3-204ENST00000377349 ADAM18Q9Y3Q7 739 aa16.33■□□□□ 0.2
CBWD3-204ENST00000377349 A6NIZ1 184 aa16.32■□□□□ 0.2
CBWD3-204ENST00000377349 NPIPB13A6NJU9 1138 aa16.32■□□□□ 0.2
CBWD3-204ENST00000377349 C17orf100A8MU93 164 aa16.32■□□□□ 0.2
CBWD3-204ENST00000377349 NPIPB4C9JG80 1138 aa16.32■□□□□ 0.2
CBWD3-204ENST00000377349 XKRYO14609 159 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms