RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 A0A1W2PQD3 144 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 TSPAN2O60636 221 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 NME1P15531 152 aaKnown RBP22.77■■□□□ 1.24
C9orf40-201ENST00000376854 CTLA4P16410 223 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 ROM1Q03395 351 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 SFRP5Q5T4F7 317 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 ARHGAP40Q5TG30 622 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 TMEM225Q6GV28 225 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 FAM166AQ6J272 317 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 OR1J4Q8NGS1 313 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 C8orf44Q96CB5 159 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 TXNIPQ9H3M7 391 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 VSX1Q9NZR4 365 aaPredicted RBP22.77■■□□□ 1.24
C9orf40-201ENST00000376854 IGHV1OR15-9A0A0B4J2B8 117 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 S100A11P31949 105 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 HLXQ14774 488 aaPredicted RBP22.77■■□□□ 1.24
C9orf40-201ENST00000376854 KCTD18Q6PI47 426 aaPredicted RBP22.77■■□□□ 1.24
C9orf40-201ENST00000376854 CLEC1AQ8NC01 280 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 TMEM138Q9NPI0 162 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 PCDH15Q96QU1 1955 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 TMED7-TICAM2A0A0A6YYA0 188 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 TTLL8A6PVC2 850 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 HMSDA8MTL9 139 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 F5H5P2 479 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 WNT11O96014 354 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 POLR2HP52434 150 aaKnown RBP22.76■■□□□ 1.23
C9orf40-201ENST00000376854 EFNA3P52797 238 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 EIF2B1Q14232 305 aaKnown RBP22.76■■□□□ 1.23
C9orf40-201ENST00000376854 SMUG1Q53HV7 270 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 PRAMEF17Q5VTA0 474 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 STEAP1BQ6NZ63 245 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 TNFAIP8L1Q8WVP5 186 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 CHRNA10Q9GZZ6 450 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 EXO5Q9H790 373 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 APMAPQ9HDC9 416 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 CKLFQ9UBR5 152 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 TMED7Q9Y3B3 224 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 ARPC4-TTLL3A0A0A6YYG9 625 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 hCG_1807616A0A1W2PRN6 198 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 DXOO77932 396 aaKnown RBP22.76■■□□□ 1.23
C9orf40-201ENST00000376854 ACSM4P0C7M7 580 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 RIDAP52758 137 aaKnown RBP22.76■■□□□ 1.23
C9orf40-201ENST00000376854 TMUB2Q71RG4 321 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 MDGA2Q7Z553 956 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 SREK1IP1Q8N9Q2 155 aaPredicted RBP22.76■■□□□ 1.23
C9orf40-201ENST00000376854 ASB5Q8WWX0 329 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 ZDHHC12Q96GR4 267 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 ZNF576Q9H609 170 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 MTCH2Q9Y6C9 303 aa22.76■■□□□ 1.23
C9orf40-201ENST00000376854 FXYD6-FXYD2A0A087WZ82 144 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 SLC22A23A1A5C7 686 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 RP2O75695 350 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 POU3F2P20265 443 aaPredicted RBP22.75■■□□□ 1.23
C9orf40-201ENST00000376854 HOXD11P31277 338 aaPredicted RBP22.75■■□□□ 1.23
C9orf40-201ENST00000376854 C1orf140Q5VVS0 124 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 DCAF12L2Q5VW00 463 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 GLT8D1Q68CQ7 371 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 TSTD1Q8NFU3 115 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 FAM174AQ8TBP5 190 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 GPX8Q8TED1 209 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 SLC25A28Q96A46 364 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 ABHD6Q9BV23 337 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 WWTR1Q9GZV5 400 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 FXYD6Q9H0Q3 95 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 CACNA1CQ13936 2221 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 TCRBV16S1A1N1A0A5B0 115 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 NPIPB7O75200 414 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 GLULP15104 373 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 ACTBP60709 375 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 ACTG1P63261 375 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 SSBP1Q04837 148 aaKnown RBP22.75■■□□□ 1.23
C9orf40-201ENST00000376854 TOMM20Q15388 145 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 NSDHLQ15738 373 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 DEFB133Q30KQ1 61 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 C4orf46Q504U0 113 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 SYT13Q7L8C5 426 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 CATSPERDQ86XM0 798 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 PRSS58Q8IYP2 241 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 GABRG1Q8N1C3 465 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 WBP1Q96G27 269 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 CHST6Q9GZX3 395 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 TAS2R4Q9NYW5 299 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 LRP12Q9Y561 859 aa22.75■■□□□ 1.23
C9orf40-201ENST00000376854 A8MVM7 634 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 H3BMH7 237 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 TO15178 435 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 CD2P06729 351 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 MAP2K6P52564 334 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 MELKQ14680 651 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 GLRX5Q86SX6 157 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 GPAT4Q86UL3 456 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 PLPP3O14495 311 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 ABCD3P28288 659 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 HTR2CP28335 458 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 VWA2Q5GFL6 755 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 GLYATL3Q5SZD4 288 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 TSSK4Q6SA08 328 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 ZNF627Q7L945 461 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 DAZLQ92904 295 aaKnown RBP22.74■■□□□ 1.23
C9orf40-201ENST00000376854 OR11A1Q9GZK7 315 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms