RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SYNPO2LQ9H987 977 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 SERINC4A6NH21 518 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 ARPC3O15145 178 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 MTX2O75431 263 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 NDUFB6O95139 128 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 ERVS71-1P61550 626 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 ACY1Q03154 408 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF85Q03923 595 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 RAB33AQ14088 237 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 ADIRFQ15847 76 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 Q6ZSR9 355 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 ARL14EPQ8N8R7 260 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 OR4D10Q8NGI6 311 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 MRPS24Q96EL2 167 aaKnown RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 KLHDC7BQ96G42 594 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 ACKR4Q9NPB9 350 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 AP4M1O00189 453 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF16P17020 682 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 RPUSD3Q6P087 351 aaKnown RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 SLCO4C1Q6ZQN7 724 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 SLC16A14Q7RTX9 510 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 OR52I1Q8NGK6 324 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 OR2G3Q8NGZ4 309 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 INTS12Q96CB8 462 aaKnown RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 C1orf105O95561 183 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 SOD1P00441 154 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 RPL13AP40429 203 aaKnown RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 FLT3LGP49771 235 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 COL19A1Q14993 1142 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 SHHQ15465 462 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 NSDHLQ15738 373 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 PABPC1L2AQ5JQF8 200 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 TRAPPC6BQ86SZ2 158 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 VRK2Q86Y07 508 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 ZMYND19Q96E35 227 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 C2orf50Q96LR7 162 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 VDAC3Q9Y277 283 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 SCN10AQ9Y5Y9 1956 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 RBBP6Q7Z6E9 1792 aaKnown RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 GAPDHP04406 335 aaKnown RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 CDONQ4KMG0 1287 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 SH2D5Q6ZV89 423 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 HDAC8Q9BY41 377 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 DOCK5Q9H7D0 1870 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 A0A0J9YY10 115 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 G3V3Q6 166 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 CD1AP06126 327 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 FAM58AQ8N1B3 248 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 C3orf30Q96M34 536 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 DPH1Q9BZG8 443 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 RNGTTO60942 597 aaKnown RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 PNPP00491 289 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 FBLP22087 321 aaKnown RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 RAC1P63000 192 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 DUSP8Q13202 625 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 HTR3DQ70Z44 454 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 ZIC5Q96T25 663 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 IL21RQ9HBE5 538 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 RARRES3Q9UL19 164 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 RHOP08100 348 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 XAF1Q6GPH4 301 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 SFT2D1Q8WV19 159 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF480Q8WV37 535 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 OR5B2Q96R09 309 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 SOX7Q9BT81 388 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 PBX4Q9BYU1 374 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 GLIS2Q9BZE0 524 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 NHSQ6T4R5 1651 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 HOXA11P31270 313 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-202ENST00000357162 C1orf94Q6P1W5 598 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 CNKSR3Q6P9H4 555 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 CCDC116Q8IYX3 515 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 SUMF1Q8NBK3 374 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 TVP23CQ96ET8 276 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 SFXN1Q9H9B4 322 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 PCDHGA1Q9Y5H4 931 aa6.05□□□□□ -1.44
VPS13B-202ENST00000357162 CLDN34H7C241 214 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 GASTP01350 101 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 CTRB1P17538 263 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 NKX2-1P43699 371 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 POM121L1PQ3SYA9 428 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ARSIQ5FYB1 569 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF648Q5T619 568 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 CTRB2Q6GPI1 263 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 CELF2-AS1Q8N7Q2 184 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 OR4F15Q8NGB8 312 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 NKX2-4Q9H2Z4 354 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 GALNT9Q9HCQ5 603 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 MEIKINA0A087WXM9 373 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 GPR31O00270 319 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 FBXO24O75426 580 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 GRPRP30550 384 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 DCXRQ7Z4W1 244 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 OR2D3Q8NGH3 330 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 SELENOIQ9C0D9 397 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF385DQ9H6B1 395 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 MEIS3P1A6NDR6 274 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 KDM4EB2RXH2 506 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 RAB38P57729 211 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms