RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 HDAC8Q9BY41 377 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 ARHGEF17Q96PE2 2063 aaPredicted RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 CPOXP36551 454 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 COMPP49747 757 aaPredicted RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 ZNF133P52736 654 aaPredicted RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 EMX1Q04741 257 aaPredicted RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 PLXDC2Q6UX71 529 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 CMTM8Q8IZV2 173 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 SLC25A32Q9H2D1 315 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 CER1O95813 267 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 POU3F1Q03052 451 aaPredicted RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 PGGHGQ32M88 737 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 LCN8Q6JVE9 175 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 KLHDC8AQ8IYD2 350 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 GPR26Q8NDV2 337 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 OR13G1Q8NGZ3 307 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 ZNF519Q8TB69 540 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 NDRG3Q9UGV2 375 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 UFC1Q9Y3C8 167 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 ZNF593O00488 134 aaPredicted RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 ALX3O95076 343 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 ZNF888P0CJ79 500 aaPredicted RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 IAPPP10997 89 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 SLC16A14Q7RTX9 510 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 FAM26EQ8N5C1 309 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 KIRREL1Q96J84 757 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 AAMDCQ9H7C9 122 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 LHX6Q9UPM6 363 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 NAGAP17050 411 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 EN2P19622 333 aaPredicted RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 CELF5Q8N6W0 485 aaKnown RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 GNPNAT1Q96EK6 184 aaPredicted RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 MS4A4EQ96PG1 132 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 ULBP2Q9BZM5 246 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 CTDSP2O14595 271 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 TAAR5O14804 337 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 SEMA7AO75326 666 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 CD82P27701 267 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 ZNF385BQ569K4 471 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 C6orf132Q5T0Z8 1188 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 TSEN54Q7Z6J9 526 aaKnown RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 TFAP2BQ92481 460 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 MOGAT1Q96PD6 335 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 FYTTD1Q96QD9 318 aaKnown RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 ANKRD60Q9BZ19 345 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 INPP5EQ9NRR6 644 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 RBFOX1Q9NWB1 397 aaKnown RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 SLC35A3Q9Y2D2 325 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 OR51B4Q9Y5P0 310 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 SOX15O60248 233 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 TPOP07202 933 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 FGF3P11487 239 aaPredicted RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 NDUFB7P17568 137 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 SRP9P49458 86 aaKnown RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 SH3BP2P78314 561 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 HBMQ6B0K9 141 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 B3GNT8Q7Z7M8 397 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 DYNC2LI1Q8TCX1 351 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 RNF2Q99496 336 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 ZNF552Q9H707 407 aaPredicted RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 DOK5Q9P104 306 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 RAB22AQ9UL26 194 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 NAV1Q8NEY1 1877 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 ALPLP05186 524 aa7.43□□□□□ -1.22
SCN8A-201ENST00000354534 CNN1P51911 297 aaKnown RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 YRDCQ86U90 279 aaKnown RBP7.43□□□□□ -1.22
SCN8A-201ENST00000354534 LRRC30A6NM36 301 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 FBP1P09467 338 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 LSM11P83369 360 aaKnown RBP eCLIP7.42□□□□□ -1.22
SCN8A-201ENST00000354534 TEKQ02763 1124 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 MS4A13Q5J8X5 152 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 MAMSTRQ6ZN01 415 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 IRF2BP1Q8IU81 584 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 PLXDC1Q8IUK5 500 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 OR13F1Q8NGS4 319 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 DDOQ99489 341 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 OCEL1Q9H607 264 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 FRS3O43559 492 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 ELAVL4P26378 380 aaKnown RBP7.42□□□□□ -1.22
SCN8A-201ENST00000354534 RHBDD2Q6NTF9 364 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 OR1N2Q8NGR9 330 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 ASB13Q8WXK3 278 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 ZCWPW2A0A1B0GU75 182 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 ACAA1P09110 424 aaPredicted RBP7.42□□□□□ -1.22
SCN8A-201ENST00000354534 C1QTNF2Q9BXJ5 285 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 DUSP13Q9UII6 198 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 OR2J2O76002 312 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 AQP8O94778 261 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 BMP5P22003 454 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 ITGB7P26010 798 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 RFX2P48378 723 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 CLDN8P56748 225 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 TMEM102Q8N9M5 508 aaPredicted RBP7.42□□□□□ -1.22
SCN8A-201ENST00000354534 TMEM163Q8TC26 289 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 TMED6Q8WW62 240 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 TMEM140Q9NV12 185 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 ZNF487B1APH4 448 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 MAN2B1O00754 1011 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 PCGF2P35227 344 aa7.42□□□□□ -1.22
SCN8A-201ENST00000354534 ERVPABLB-1P60509 514 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms