RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 HIST1H2ABP04908 130 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 EPHA1P21709 976 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 RBM34P42696 430 aaKnown RBP13.47□□□□□ -0.25
PDGFA-201ENST00000354513 NUDT2P50583 147 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 ZNF84P51523 738 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 HILS1P60008 231 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 PIN1Q13526 163 aaPredicted RBP13.47□□□□□ -0.25
PDGFA-201ENST00000354513 TSTQ16762 297 aaKnown RBP13.47□□□□□ -0.25
PDGFA-201ENST00000354513 SPATA46Q5T0L3 261 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 INTS11Q5TA45 600 aaKnown RBP13.47□□□□□ -0.25
PDGFA-201ENST00000354513 TMEM154Q6P9G4 183 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 C12orf54Q6X4T0 127 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 HIST3H2AQ7L7L0 130 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 ICA1LQ8NDH6 482 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 AKR7LQ8NHP1 331 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 SNX33Q8WV41 574 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 TMEM239Q8WW34 195 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 C11orf40Q8WZ69 217 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 HIST1H2ACQ93077 130 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 SGTBQ96EQ0 304 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 SLCO1C1Q9NYB5 712 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 RIMS3Q9UJD0 308 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 SH3GLB1Q9Y371 365 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 WNK2Q9Y3S1 2297 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 IQCMA0A1B0GVH7 501 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 MCIDASD6RGH6 385 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 UBOX5O94941 541 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 OR5F1O95221 314 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 MPZL1O95297 269 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 NPPAP01160 153 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 STOMP27105 288 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 RAD52P43351 418 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 OR1E2P47887 323 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 COMPP49747 757 aaPredicted RBP13.46□□□□□ -0.25
PDGFA-201ENST00000354513 DAP3P51398 398 aaKnown RBP13.46□□□□□ -0.25
PDGFA-201ENST00000354513 PSG4Q00888 419 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 FHL1Q13642 323 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 LAPTM4AQ15012 233 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 FAHD2BQ6P2I3 314 aaPredicted RBP13.46□□□□□ -0.25
PDGFA-201ENST00000354513 FOXL2NBQ6ZUU3 175 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 C1QL2Q7Z5L3 287 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 LRRC75AQ8NAA5 344 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 OR1J2Q8NGS2 313 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 SLC25A40Q8TBP6 338 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 SLC26A7Q8TE54 656 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 LRRC58Q96CX6 371 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 FAHD2AQ96GK7 314 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 WNT5BQ9H1J7 359 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 SIAEQ9HAT2 523 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 SMURF2Q9HAU4 748 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 ESM1Q9NQ30 184 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 DCAF16Q9NXF7 216 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 HIF3AQ9Y2N7 669 aa13.46□□□□□ -0.25
PDGFA-201ENST00000354513 MEGF8Q7Z7M0 2845 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 ICMTO60725 284 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 PTHP01270 115 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 IGHMP01871 453 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 ADRA2CP18825 462 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 CALB2P22676 271 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 APLNRP35414 380 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 MNAT1P51948 309 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 TAS2R41P59536 307 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 ERVK-25P63136 954 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 MXRA7P84157 204 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 HSF2Q03933 536 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 PLP2Q04941 152 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 GABPB1Q06547 395 aaPredicted RBP13.45□□□□□ -0.26
PDGFA-201ENST00000354513 THEM4Q5T1C6 240 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 ACSM5Q6NUN0 579 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 SHQ1Q6PI26 577 aaKnown RBP13.45□□□□□ -0.26
PDGFA-201ENST00000354513 USP43Q70EL4 1123 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 RASSF5Q8WWW0 418 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 NSMAFQ92636 917 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 ZNF583Q96ND8 569 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 OR2J1Q9GZK6 312 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 POLR2J2Q9GZM3 115 aaKnown RBP13.45□□□□□ -0.26
PDGFA-201ENST00000354513 POLR2J3Q9H1A7 115 aaKnown RBP13.45□□□□□ -0.26
PDGFA-201ENST00000354513 TXNIPQ9H3M7 391 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 SAP30LQ9HAJ7 183 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 OPN4Q9UHM6 478 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 GPR160Q9UJ42 338 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 A4GNTQ9UNA3 340 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 CMYA5Q8N3K9 4069 aa13.45□□□□□ -0.26
PDGFA-201ENST00000354513 TMEM89A2RUT3 159 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 CLDN25C9JDP6 229 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 NGFP01138 241 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 SCG5P05408 212 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 ADH4P08319 380 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 T-ENOLP0DO92 83 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 CCNOP22674 350 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 ZNF81P51508 661 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 SELENOVP59797 346 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 ENDOGQ14249 297 aaKnown RBP13.44□□□□□ -0.26
PDGFA-201ENST00000354513 TUSC1Q2TAM9 212 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 FAM209AQ5JX71 171 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 MBNL2Q5VZF2 373 aaKnown RBP13.44□□□□□ -0.26
PDGFA-201ENST00000354513 HACD2Q6Y1H2 254 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 PEG10Q86TG7 708 aaKnown RBP13.44□□□□□ -0.26
PDGFA-201ENST00000354513 OR8J3Q8NGG0 315 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 KLF14Q8TD94 323 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms