RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 LSRQ86X29 649 aaPredicted RBP12.28□□□□□ -0.44
COL6A3-202ENST00000347401 FAM72BQ86X60 149 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 NAT6Q93015 286 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 CAPNS2Q96L46 248 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 TRAPPC2LQ9UL33 140 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 IGLON5A6NGN9 336 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 MEIS3P2A8K0S8 358 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 PRAMEF26H0Y7S4 382 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 TNFRSF1BP20333 461 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 LKAAEAR1Q8TD35 194 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 GPR171O14626 319 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 ACOT8O14734 319 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 GSTP1P09211 210 aaKnown RBP12.28□□□□□ -0.44
COL6A3-202ENST00000347401 CST2P09228 141 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 NTSR1P30989 418 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.28□□□□□ -0.44
COL6A3-202ENST00000347401 ZNF628Q5EBL2 1059 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 ACTL7AQ9Y615 435 aa12.28□□□□□ -0.44
COL6A3-202ENST00000347401 CHRM4P08173 479 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 SNRPBP14678 240 aaKnown RBP12.27□□□□□ -0.44
COL6A3-202ENST00000347401 SLC6A11P48066 632 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 TPBGQ13641 420 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 TMEM151BQ8IW70 566 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 ACOD1A6NK06 481 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 TMEM189-UBE2V1I3L0A0 370 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 DCTN6O00399 190 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 SMIM18P0DKX4 95 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 SLC11A1P49279 550 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 ISL1P61371 349 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 DOK3Q7L591 496 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 OR2AE1Q8NHA4 323 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 UCN3Q969E3 161 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 IGSF8Q969P0 613 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 CDCA3Q99618 268 aaPredicted RBP12.27□□□□□ -0.44
COL6A3-202ENST00000347401 CTDSP1Q9GZU7 261 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 PLK3Q9H4B4 646 aa12.27□□□□□ -0.44
COL6A3-202ENST00000347401 ABCD4O14678 606 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 CTSLP07711 333 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 CGB2Q6NT52 195 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 C17orf107Q6ZR85 190 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 SCAMP4Q969E2 229 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 ULBP2Q9BZM5 246 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 TRAV27A0A087WT01 109 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 A0A1B0GTW7 788 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 SYT14P1Q58G82 188 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 ABI3BPQ7Z7G0 1075 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 NPRL2Q8WTW4 380 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 EMC9Q9Y3B6 208 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 KCPQ6ZWJ8 1503 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 RFPL4AA6NLU0 287 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 HMSDA8MTL9 139 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 RFPL4AL1F8VTS6 287 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 XRCC3O43542 346 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 CD37P11049 281 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 CD79AP11912 226 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 DRD1P21728 446 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 TOR2AQ5JU69 321 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 OR2T2Q6IF00 324 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 GRAMD2AQ8IUY3 354 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 RTP3Q9BQQ7 232 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 SMDT1Q9H4I9 107 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 MED9Q9NWA0 146 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 BET1LQ9NYM9 111 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 URGCP-MRPS24S4R325 110 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 MEIS3P1A6NDR6 274 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 VAMP5O95183 116 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 DBHP09172 617 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 FOLR3P41439 243 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 TMEM97Q5BJF2 176 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 OR7E24Q6IFN5 339 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 ARRDC1Q8N5I2 433 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 MFSD9Q8NBP5 474 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 BLNKQ8WV28 456 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 SMIM7Q9BQ49 75 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 GNG12Q9UBI6 72 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 TEX50A0A1B0GTY4 177 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 DRGXA6NNA5 263 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 HNRNPA2B1P22626 353 aaKnown RBP12.27□□□□□ -0.45
COL6A3-202ENST00000347401 OR10A3P58181 314 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 ZNF836Q6ZNA1 936 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 PRR18Q8N4B5 295 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 CREBZFQ9NS37 354 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 MYEF2Q9P2K5 600 aaKnown RBP12.27□□□□□ -0.45
COL6A3-202ENST00000347401 PCDHGA1Q9Y5H4 931 aa12.27□□□□□ -0.45
COL6A3-202ENST00000347401 USP54Q70EL1 1684 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 PSMB10P40306 273 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 ZNF90Q03938 601 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 NCR3LG1Q68D85 454 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 RELL2Q8NC24 303 aaPredicted RBP12.26□□□□□ -0.45
COL6A3-202ENST00000347401 ZFPM2Q8WW38 1151 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 SAT2Q96F10 170 aaPredicted RBP12.26□□□□□ -0.45
COL6A3-202ENST00000347401 ZNF583Q96ND8 569 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 LYRM4Q9HD34 91 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 WNT6Q9Y6F9 365 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 ORM1P02763 201 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 CLEC3BP05452 202 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 LIMS3P0CW19 117 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 LIMS4P0CW20 117 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 CAMKMTQ7Z624 323 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 SPICQ8N5J4 248 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms