RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 RENP00797 406 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 SERPINA5P05154 406 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 ZNF32P17041 273 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 MSR1P21757 451 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 FASP25445 335 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 TTKP33981 857 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 FABP6P51161 128 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 ACTR3P61158 418 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 HGFACQ04756 655 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.22□□□□□ -0.29
UBE3B-201ENST00000340074 DBPQ10586 325 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-201ENST00000340074 SLC36A3Q495N2 470 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 GLB1L2Q8IW92 636 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 LNX2Q8N448 690 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 OR4Q3Q8NH05 313 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 TMEM171Q8WVE6 324 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 NRBF2Q96F24 287 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 SNX18Q96RF0 628 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 FOXC2Q99958 501 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 FN3KQ9H479 309 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 ZNF556Q9HAH1 456 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 CCNB1IP1Q9NPC3 277 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 RPRD1BQ9NQG5 326 aaKnown RBP13.22□□□□□ -0.29
UBE3B-201ENST00000340074 FAIMQ9NVQ4 179 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 BEX4Q9NWD9 120 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-201ENST00000340074 FBXL3Q9UKT7 428 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 OR6C68A6NDL8 312 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 H3BN98 237 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 SMPD2O60906 423 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 MPZL1O95297 269 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 GPANK1O95872 356 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 CD8AP01732 235 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 CST2P09228 141 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 ZNF35P13682 527 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 ANXA8P13928 327 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 CRABP1P29762 137 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 ENDOGQ14249 297 aaKnown RBP13.21□□□□□ -0.3
UBE3B-201ENST00000340074 TESK1Q15569 626 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 AGAP6Q5VW22 663 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 OTPQ5XKR4 325 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 VHLLQ6RSH7 139 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 UGT2A3Q6UWM9 527 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 AMIGO2Q86SJ2 522 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 OR6V1Q8N148 313 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 FBXL14Q8N1E6 418 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 ATG16L2Q8NAA4 619 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 NPEPL1Q8NDH3 523 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 OR2T33Q8NG76 320 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 OR4F15Q8NGB8 312 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 TEX47Q8TBZ9 253 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 PYDC1Q8WXC3 89 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 LRTOMTQ8WZ04 291 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 BDH2Q9BUT1 245 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 ZNF416Q9BWM5 594 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 SRA1Q9HD15 236 aaKnown RBP13.21□□□□□ -0.3
UBE3B-201ENST00000340074 EMC7Q9NPA0 242 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 CA10Q9NS85 328 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 B9D1Q9UPM9 204 aa13.21□□□□□ -0.3
UBE3B-201ENST00000340074 CHD3Q12873 2000 aaKnown RBP13.21□□□□□ -0.3
UBE3B-201ENST00000340074 IQCMA0A1B0GVH7 501 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 FCGR1AP12314 374 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 CCL2P13500 99 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 APOBEC3AP31941 199 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-201ENST00000340074 CENPAP49450 140 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 PSG4Q00888 419 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 PABPC1L2AQ5JQF8 200 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 ZNF362Q5T0B9 420 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-201ENST00000340074 KRT80Q6KB66 452 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 ZNF544Q6NX49 715 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 DNM1P34Q6PK57 102 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 DTX2Q86UW9 622 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 MUC15Q8N387 334 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 IQCF1Q8N6M8 205 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 CYB561A3Q8NBI2 242 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 CPEB3Q8NE35 698 aaKnown RBP13.2□□□□□ -0.3
UBE3B-201ENST00000340074 SLC30A7Q8NEW0 376 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 OR5K1Q8NHB7 308 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 AKR7LQ8NHP1 331 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 DDOQ99489 341 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 TRAF4Q9BUZ4 470 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-201ENST00000340074 CXXC4Q9H2H0 198 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 CXorf56Q9H5V9 222 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 BAIAP2Q9UQB8 552 aa13.2□□□□□ -0.3
UBE3B-201ENST00000340074 ITPR3Q14573 2671 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 IGLV1-36A0A0B4J1U3 117 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 C12orf71A8MTZ7 269 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 G3V2T6 193 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 OVOL3O00110 214 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 PTHP01270 115 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 OSMP13725 252 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 APEX1P27695 318 aaKnown RBP13.19□□□□□ -0.3
UBE3B-201ENST00000340074 POU1F1P28069 291 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 HSF2Q03933 536 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 PLP2Q04941 152 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 SNTB2Q13425 540 aaKnown RBP13.19□□□□□ -0.3
UBE3B-201ENST00000340074 YTHDF3Q7Z739 585 aaKnown RBP13.19□□□□□ -0.3
UBE3B-201ENST00000340074 ZBTB46Q86UZ6 589 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 PAQR4Q8N4S7 273 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-201ENST00000340074 NUP37Q8NFH4 326 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 C11orf40Q8WZ69 217 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms