RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 EMC7Q9NPA0 242 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 CCNB1IP1Q9NPC3 277 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 ARHGAP32A7KAX9 2087 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 FBN3Q75N90 2809 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 A0A1W2PPL8 197 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 SLC22A23A1A5C7 686 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 EFCAB9A8MZ26 197 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 CENPBD1B2RD01 187 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 GSTA4O15217 222 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 SPRY3O43610 288 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 PRSS23O95084 383 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 SERPINA1P01009 418 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 IGF2P01344 180 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 ACHEP22303 614 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 SRP14P37108 136 aaKnown RBP11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 MDH1P40925 334 aaKnown RBP11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 TMEM33P57088 247 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 ENDOGQ14249 297 aaKnown RBP11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 TRAM2Q15035 370 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 FAM27BQ5VT28 67 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 C8orf82Q6P1X6 216 aaPredicted RBP11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 TMEM154Q6P9G4 183 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 FKBP9P1Q75LS8 142 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 CBLL1Q75N03 491 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 SLC25A40Q8TBP6 338 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 MARS2Q96GW9 593 aaKnown RBP11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 HSH2DQ96JZ2 352 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 Q96M85 177 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 ZNF416Q9BWM5 594 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 OR2H1Q9GZK4 316 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 OR2J1Q9GZK6 312 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 LRMDAQ9H2I8 198 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 KCNN2Q9H2S1 579 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 POFUT1Q9H488 388 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 CCDC134Q9H6E4 229 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 ADAM18Q9Y3Q7 739 aa11.39□□□□□ -0.59
NUDCD3-201ENST00000338427 TPD52L2O43399 206 aaKnown RBP11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 RGS9O75916 674 aaPredicted RBP11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 DIRAS1O95057 198 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 MPZL1O95297 269 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 SNAP29O95721 258 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 AVPP01185 164 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 PTHP01270 115 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 IGHV3-13P01766 116 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 IFNW1P05000 195 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 GAAP10253 952 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 HNF1AP20823 631 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 GDI2P50395 445 aaKnown RBP11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 SELENOVP59797 346 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 NRN1LQ496H8 165 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 IFI44LQ53G44 452 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 THSD4Q6ZMP0 1018 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 ZNF730Q6ZMV8 503 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 USP51Q70EK9 711 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 DPPA2Q7Z7J5 298 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 OAFQ86UD1 273 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 IPCEF1Q8WWN9 437 aaPredicted RBP11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 LZICQ8WZA0 190 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 ELAC2Q9BQ52 826 aaKnown RBP11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 ALG12Q9BV10 488 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 HIF1ANQ9NWT6 349 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 DCAF16Q9NXF7 216 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 EGFL7Q9UHF1 273 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 IL20RAQ9UHF4 553 aa11.38□□□□□ -0.59
NUDCD3-201ENST00000338427 B4DSR2 109 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 ENTPD5O75356 428 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 PTP4A3O75365 173 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 IGHV1-46P01743 117 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 IGHMP01871 453 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 DRD4P21917 467 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 THBS2P35442 1172 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 CRYBB2P43320 205 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 SLC9A3P48764 834 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 DVL1P1P54792 670 aaPredicted RBP11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 PSME3P61289 254 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 ZNF718Q3SXZ3 478 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 C1orf229Q6ZS94 237 aaPredicted RBP11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 RFPL4BQ6ZWI9 263 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 MBOAT2Q6ZWT7 520 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 OFCC1Q8IZS5 231 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 RNF148Q8N7C7 305 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 FAM86B1Q8N7N1 296 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 KLF14Q8TD94 323 aaPredicted RBP11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 ACOT11Q8WXI4 607 aaPredicted RBP11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 SLC7A6Q92536 515 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 LRRC37BQ96QE4 947 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 HOPXQ9BPY8 73 aaPredicted RBP11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 BCL2L14Q9BZR8 327 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 C1orf198Q9H425 327 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 RERGLQ9H628 205 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 EFCAB1Q9HAE3 211 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 NMNAT1Q9HAN9 279 aaPredicted RBP11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 SLCO1C1Q9NYB5 712 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 EIF3KQ9UBQ5 218 aaKnown RBP11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 TIMM10BQ9Y5J6 103 aa11.37□□□□□ -0.59
NUDCD3-201ENST00000338427 IGHV1-69-2A0A0G2JMI3 117 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 ZSCAN5BA6NJL1 495 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 NPIPB13A6NJU9 1138 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 NPIPB4C9JG80 1138 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 VENTXO95231 258 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms