RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SYT9Q86SS6 491 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 CPOQ8IVL8 374 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 DEPDC4Q8N2C3 294 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 ZNF555Q8NEP9 628 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 IL17RDQ8NFM7 739 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 OR10H5Q8NGA6 315 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 OR9Q1Q8NGQ5 310 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 PTP4A1Q93096 173 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 C14orf79Q96F83 325 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 PIK3IP1Q96FE7 263 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 CDADC1Q9BWV3 514 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 NMNAT2Q9BZQ4 307 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 GRIP2Q9C0E4 1043 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 OR51V1Q9H2C8 321 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 FN3KQ9H479 309 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 TOR3AQ9H497 397 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 B3GNT2Q9NY97 397 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 NKX1-2Q9UD57 310 aaPredicted RBP10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 RRP15Q9Y3B9 282 aaKnown RBP10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 TIMM10BQ9Y5J6 103 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 ALPK2Q86TB3 2170 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 SPTAN1Q13813 2472 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 FAM183AA6NL82 134 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 FAM171A2A8MVW0 826 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 DCTN6O00399 190 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 SNAP29O95721 258 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 CD3EP07766 207 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 PATE4P0C8F1 98 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 SPI1P17947 270 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 EPHA2P29317 976 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 PYCR1P32322 319 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 PTDSS1P48651 473 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 TEKQ02763 1124 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 TLE4Q04727 773 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 C3orf36Q3SXR2 165 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 NCMAPQ5T1S8 102 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 OGFRL1Q5TC84 451 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 HIST2H2BCQ6DN03 193 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 PLBD1Q6P4A8 553 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 CXXC5Q7LFL8 322 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 MDP1Q86V88 176 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 ALDH16A1Q8IZ83 802 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 TCEANCQ8N8B7 351 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 TRUB1Q8WWH5 349 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 C11orf40Q8WZ69 217 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 NABP1Q96AH0 204 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 PLPPR2Q96GM1 343 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 RADILQ96JH8 1075 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 HRASLS5Q96KN8 279 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 FOXN4Q96NZ1 517 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 KCNS3Q9BQ31 491 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 VCX3BQ9H321 246 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 MED20Q9H944 212 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 IMPAD1Q9NX62 359 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 SMPD3Q9NY59 655 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 CRNNQ9UBG3 495 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 KCNG2Q9UJ96 466 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 GMPPBQ9Y5P6 360 aa10.39□□□□□ -0.75
SPTLC1-202ENST00000337841 FREM1Q5H8C1 2179 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 LOC100130705A0A1B0GUX0 176 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 IQCMA0A1B0GVH7 501 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 DPRXA6NFQ7 191 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 DEFB108AA8MXU0 73 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 GLCEO94923 617 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 MPZL1O95297 269 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 HRGP04196 525 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 SERPINA5P05154 406 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 SCG5P05408 212 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 CD40P25942 277 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 PEX2P28328 305 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 GGT2P36268 569 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 RPS7P62081 194 aaKnown RBP10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 SCRN3Q0VDG4 424 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 KLHL12Q53G59 568 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 SLC35D3Q5M8T2 416 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 TTC23Q5W5X9 447 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 ZNF787Q6DD87 383 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 ZNF295-AS1Q8N0V1 137 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 SLC26A10Q8NG04 563 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 OR51L1Q8NGJ5 315 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 OR8J1Q8NGP2 316 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 OR1J2Q8NGS2 313 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 OR6K6Q8NGW6 343 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 OR2AJ1Q8NGZ0 328 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 FGFBP3Q8TAT2 258 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 TMEM163Q8TC26 289 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 HTRA1Q92743 480 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 FBXO17Q96EF6 278 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 IL4I1Q96RQ9 567 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 ZNF416Q9BWM5 594 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 C1orf198Q9H425 327 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 EMC7Q9NPA0 242 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 HINT3Q9NQE9 182 aaKnown RBP10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 RASSF1Q9NS23 344 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 FAM118AQ9NWS6 357 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 POLR1DQ9Y2S0 133 aa10.38□□□□□ -0.75
SPTLC1-202ENST00000337841 USP9YO00507 2555 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 FAM221AA4D161 298 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms