RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 IGHV2-70P01814 119 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 GP1BAP07359 652 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 CD38P28907 300 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 MPGP29372 298 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 EFNA3P52797 238 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 RPS15P62841 145 aaKnown RBP12.56□□□□□ -0.4
SF1-202ENST00000334944 CSRP2Q16527 193 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 ZNF595Q8IYB9 648 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 ZNF433Q8N7K0 673 aaPredicted RBP12.56□□□□□ -0.4
SF1-202ENST00000334944 ZNF615Q8N8J6 731 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 HAVCR2Q8TDQ0 301 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 RASL12Q9NYN1 266 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 FREM2Q5SZK8 3169 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 EML5Q05BV3 1969 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 TNRC18O15417 2968 aaPredicted RBP12.56□□□□□ -0.4
SF1-202ENST00000334944 IGKV1D-42A0A075B6H8 117 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 TRBV2A0A0J9YWF9 115 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 A0A1B0GTH9 108 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 ACOD1A6NK06 481 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 ELOA3DA6NLF2 546 aaPredicted RBP12.56□□□□□ -0.4
SF1-202ENST00000334944 PLPP2O43688 288 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 SRPX2O60687 465 aaPredicted RBP12.56□□□□□ -0.4
SF1-202ENST00000334944 NSA2O95478 260 aaKnown RBP12.56□□□□□ -0.4
SF1-202ENST00000334944 PITPNAQ00169 270 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 ZP2Q05996 745 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 FABP9Q0Z7S8 132 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 ELOCQ15369 112 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 ZNF141Q15928 474 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 ELOA3BQ3SY89 546 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 CCDC157Q569K6 752 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 LEG1Q6P5S2 330 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 ZNF550Q7Z398 422 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 ZSCAN1Q8NBB4 408 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 FAM71CQ8NEG0 241 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 ELOA3Q8NG57 546 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 LCORQ96JN0 433 aaPredicted RBP12.56□□□□□ -0.4
SF1-202ENST00000334944 TREM1Q9NP99 234 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 A0A087WUJ7 227 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 TVP23AA6NH52 213 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 TMEM150CB9EJG8 249 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 PRAF2O60831 178 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 SMIM6P0DI80 62 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 EDNRAP25101 427 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 CDKN2AP42771 156 aaKnown RBP12.56□□□□□ -0.4
SF1-202ENST00000334944 PON3Q15166 354 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.56□□□□□ -0.4
SF1-202ENST00000334944 C1QL3Q5VWW1 255 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 SLC35F2Q8IXU6 374 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 MUC20Q8N307 709 aaPredicted RBP12.56□□□□□ -0.4
SF1-202ENST00000334944 PTPMT1Q8WUK0 201 aaPredicted RBP12.56□□□□□ -0.4
SF1-202ENST00000334944 ARL5BQ96KC2 179 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 CNN2Q99439 309 aaKnown RBP12.56□□□□□ -0.4
SF1-202ENST00000334944 G6PC3Q9BUM1 346 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 CHST6Q9GZX3 395 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 OR51M1Q9H341 326 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 PDE7BQ9NP56 450 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 MKL2Q9ULH7 1088 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 FAM96BQ9Y3D0 163 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 DCTN6O00399 190 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 NUDT14O95848 222 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 ACTL6AO96019 429 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 CLPSP04118 112 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 BTF3P20290 206 aaKnown RBP12.55□□□□□ -0.4
SF1-202ENST00000334944 DYRK1AQ13627 763 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 TOMM34Q15785 309 aaPredicted RBP12.55□□□□□ -0.4
SF1-202ENST00000334944 PLEKHN1Q494U1 663 aaPredicted RBP12.55□□□□□ -0.4
SF1-202ENST00000334944 UNQ6126/PRO20091Q6UXV3 157 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 LINC00114Q6XXX2 140 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 C16orf47Q6ZP98 133 aaPredicted RBP12.55□□□□□ -0.4
SF1-202ENST00000334944 ZNF546Q86UE3 836 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 NPEPL1Q8NDH3 523 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 HOXB13Q92826 284 aaPredicted RBP12.55□□□□□ -0.4
SF1-202ENST00000334944 SGK3Q96BR1 496 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 TMPRSS13Q9BYE2 586 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 GPR27Q9NS67 375 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 TAS2R5Q9NYW4 299 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 ST6GALNAC2Q9UJ37 374 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 TMEM272A0A1B0GTI8 110 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 EPXP11678 715 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 SPI1P17947 270 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 DLX5P56178 289 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 MICBQ29980 383 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 OR2B11Q5JQS5 317 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 DMKNQ6E0U4 476 aaPredicted RBP12.55□□□□□ -0.4
SF1-202ENST00000334944 NDUFAF7Q7L592 441 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 OR6V1Q8N148 313 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 KTI12Q96EK9 354 aaPredicted RBP12.55□□□□□ -0.4
SF1-202ENST00000334944 SLC25A32Q9H2D1 315 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 GPN1Q9HCN4 374 aaPredicted RBP12.55□□□□□ -0.4
SF1-202ENST00000334944 POLE3Q9NRF9 147 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 ZFP57Q9NU63 452 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 FBXL21Q9UKT6 434 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 CAMK2AQ9UQM7 478 aa12.55□□□□□ -0.4
SF1-202ENST00000334944 CELSR3Q9NYQ7 3312 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 METTL21EPA6NDL7 271 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 ITPKBP27987 946 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 GPX4P36969 197 aaPredicted RBP12.54□□□□□ -0.4
SF1-202ENST00000334944 FUT7Q11130 342 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 EIF2S3LQ2VIR3 472 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms