RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ASB13Q8WXK3 278 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 TCEAL3Q969E4 200 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 PAPOLGQ9BWT3 736 aaKnown RBP12.45□□□□□ -0.42
SYNE3-201ENST00000334258 ALX4Q9H161 411 aaPredicted RBP12.45□□□□□ -0.42
SYNE3-201ENST00000334258 TLNRD1Q9H1K6 362 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 SERGEFQ9UGK8 458 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 CACNA1IQ9P0X4 2223 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 AKR7A3O95154 331 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 AK1P00568 194 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 GPR143P51810 404 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 CTXN1P60606 82 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 AVPI1Q5T686 147 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 ATPAF1Q5TC12 328 aaPredicted RBP12.44□□□□□ -0.42
SYNE3-201ENST00000334258 C3orf33Q6P1S2 294 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 SLC43A2Q8N370 569 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 OR52R1Q8NGF1 315 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 OR10G6Q8NH81 332 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 SFT2D1Q8WV19 159 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 DNAJA3Q96EY1 480 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 CNTNAP3BQ96NU0 1288 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 STACQ99469 402 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 PRMT8Q9NR22 394 aaPredicted RBP12.44□□□□□ -0.42
SYNE3-201ENST00000334258 DNAJB12Q9NXW2 375 aaKnown RBP12.44□□□□□ -0.42
SYNE3-201ENST00000334258 OR6C76A6NM76 312 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 ALOX12BO75342 701 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 CD63P08962 238 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 HNRNPA1P09651 372 aaKnown RBP eCLIP12.44□□□□□ -0.42
SYNE3-201ENST00000334258 ZNF10P21506 573 aaPredicted RBP12.44□□□□□ -0.42
SYNE3-201ENST00000334258 CASRP41180 1078 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 MAP3K8P41279 467 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 CASP6P55212 293 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 AIMP2Q13155 320 aaKnown RBP12.44□□□□□ -0.42
SYNE3-201ENST00000334258 NR0B2Q15466 257 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 ZNHIT3Q15649 155 aaPredicted RBP12.44□□□□□ -0.42
SYNE3-201ENST00000334258 LINC01590Q5TEZ4 76 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 EEF1A1P5Q5VTE0 462 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 DBX2Q6ZNG2 339 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 PRSS41Q7RTY9 318 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 YAF2Q8IY57 180 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 OR6S1Q8NH40 331 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 ARL11Q969Q4 196 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 PHYHIPLQ96FC7 376 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 ARL5BQ96KC2 179 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 GAS2L1Q99501 681 aaPredicted RBP12.44□□□□□ -0.42
SYNE3-201ENST00000334258 SPSB2Q99619 263 aa12.44□□□□□ -0.42
SYNE3-201ENST00000334258 LOC100289279A0A1B0GTE1 492 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 URADA6NGE7 173 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 OR4C45A6NMZ5 311 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 P2RX6O15547 441 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 IGFBP4P22692 258 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 GJA4P35212 333 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 CXADRP78310 365 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 FAM122BQ7Z309 247 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 ZNF550Q7Z398 422 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 GATSQ8NAP1 163 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 OR10R2Q8NGX6 335 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 EDARADDQ8WWZ3 215 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 ZNF426Q9BUY5 554 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 FAM117AQ9C073 453 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 SRMSQ9H3Y6 488 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 LHX6Q9UPM6 363 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 RNF222A6NCQ9 220 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 SULT1C2O00338 296 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 ARPC3O15145 178 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 CSTAP01040 98 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 SFTPCP11686 197 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 ADCYAP1P18509 176 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 AVPR2P30518 371 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 NPBWR1P48145 328 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 SRSF3P84103 164 aaKnown RBP12.43□□□□□ -0.42
SYNE3-201ENST00000334258 SGCGQ13326 291 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 PLEKHN1Q494U1 663 aaPredicted RBP12.43□□□□□ -0.42
SYNE3-201ENST00000334258 DNM1P46Q6ZS02 220 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 FRMD1Q8N878 549 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 ZSCAN1Q8NBB4 408 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 TMED6Q8WW62 240 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 FOXN4Q96NZ1 517 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 ZFP57Q9NU63 452 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 COLEC10Q9Y6Z7 277 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 LRRK1Q38SD2 2015 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 DOCK8Q8NF50 2099 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 TRBV5-5A0A0J9YX44 114 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 EFCAB7A8K855 629 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 ZNF208O43345 1280 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 ZNF432O94892 652 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 GPR75O95800 540 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 ACTL6AO96019 429 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 RELQ04864 619 aaPredicted RBP12.43□□□□□ -0.42
SYNE3-201ENST00000334258 FAM53BQ14153 422 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 ITPRIPL2Q3MIP1 535 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 ZNF528Q3MIS6 628 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 CDNFQ49AH0 187 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 FBXO42Q6P3S6 717 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 LRRC69Q6ZNQ3 347 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 ARMC10Q8N2F6 343 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 TMEM52Q8NDY8 209 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 OR4S1Q8NGB4 309 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 GLYATL2Q8WU03 294 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 SEH1LQ96EE3 360 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms