RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 C14orf105Q9NVL8 296 aa15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 H3BMH7 237 aa15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 OR8G3PP0DMU2 310 aa15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 SPI1P17947 270 aa15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 CBX5P45973 191 aa15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 MPPED2Q15777 294 aa15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 DNM1P46Q6ZS02 220 aa15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 WDR5BQ86VZ2 330 aa15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 OR8S1Q8NH09 359 aa15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 LILRB1Q8NHL6 650 aaPredicted RBP15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 EDAQ92838 391 aa15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 DVL3Q92997 716 aaPredicted RBP15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 Q96M85 177 aa15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 BARX1Q9HBU1 254 aaPredicted RBP15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 APMAPQ9HDC9 416 aa15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 PRDM9Q9NQV7 894 aa15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 PRMT8Q9NR22 394 aaPredicted RBP15.53■□□□□ 0.08
SCAMP4-201ENST00000316097 OR6C68A6NDL8 312 aa15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 H7C2Y5 167 aa15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 SMAD9O15198 467 aaKnown RBP15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 XRCC3O43542 346 aa15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 ANXA2P07355 339 aaKnown RBP15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 CSF1P09603 554 aa15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 Q499Y3 187 aa15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 TMEM105Q8N8V8 129 aa15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 OR8K3Q8NH51 312 aa15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 SAP25Q8TEE9 199 aa15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 RAB33BQ9H082 229 aa15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 DNTTIP1Q9H147 329 aa15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 ZNF230Q9UIE0 474 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 ZNF346Q9UL40 294 aaKnown RBP15.52■□□□□ 0.08
SCAMP4-201ENST00000316097 VWA2Q5GFL6 755 aa15.52■□□□□ 0.07
SCAMP4-201ENST00000316097 NPEPL1Q8NDH3 523 aa15.52■□□□□ 0.07
SCAMP4-201ENST00000316097 TMEM185AQ8NFB2 350 aa15.52■□□□□ 0.07
SCAMP4-201ENST00000316097 RPS4Y2Q8TD47 263 aa15.52■□□□□ 0.07
SCAMP4-201ENST00000316097 RNF166Q96A37 237 aaPredicted RBP15.52■□□□□ 0.07
SCAMP4-201ENST00000316097 RASD2Q96D21 266 aa15.52■□□□□ 0.07
SCAMP4-201ENST00000316097 WDR13Q9H1Z4 485 aa15.52■□□□□ 0.07
SCAMP4-201ENST00000316097 TMEM185BQ9H7F4 350 aa15.52■□□□□ 0.07
SCAMP4-201ENST00000316097 MLXQ9UH92 298 aa15.52■□□□□ 0.07
SCAMP4-201ENST00000316097 LY6G6EA0A0G2JKS1 128 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 H0YC42 278 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 EIF4E2O60573 245 aaKnown RBP15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 ZNF254O75437 659 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 HOXA6P31267 233 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 LUMP51884 338 aaPredicted RBP15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 EFNA3P52797 238 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 TMEM88Q6PEY1 159 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 SHISA6Q6ZSJ9 500 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 ZNF321PQ8N8H1 164 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 U3KQA8 63 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 ADAMTS9Q9P2N4 1935 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 TRAV8-7A0A075B6U6 113 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 CCDC163A0A0D9SF12 145 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 TMEM127O75204 238 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 CD3DP04234 171 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 AKAIN1P0CW23 69 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 CNR1P21554 472 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 EMDP50402 254 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 EFNB2P52799 333 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 PSG6Q00889 435 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 LRRTM1Q86UE6 522 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 OR5AK2Q8NH90 309 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 ZNF75AQ96N20 296 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 C12orf57Q99622 126 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 USB1Q9BQ65 265 aaKnown RBP15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 ZNF426Q9BUY5 554 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 TAS2R8Q9NYW2 309 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 ERVK-19Q9WJR5 959 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 A0A087WV62 115 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 A0A1B0GTH9 108 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 A0A1W2PQM1 296 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 CLDN4O14493 209 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 MOB3CQ70IA8 216 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 BEST3Q8N1M1 668 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 CDRT4Q8N9R6 151 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 ZNF511Q8NB15 262 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 TSLPQ969D9 159 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 LRFN5Q96NI6 719 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 POFUT1Q9H488 388 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 DUSP22Q9NRW4 184 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 FGF21Q9NSA1 209 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 SLC39A1Q9NY26 324 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 ZNF337Q9Y3M9 751 aa15.51■□□□□ 0.07
SCAMP4-201ENST00000316097 GGT3PA6NGU5 568 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 GPR31O00270 319 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 BRINP1O60477 761 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 CCL7P80098 99 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 BEX5Q5H9J7 111 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 LY6G6FQ5SQ64 297 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 TMED4Q7Z7H5 227 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 ZNF227Q86WZ6 799 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 DGAT2Q96PD7 388 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 IFT22Q9H7X7 185 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 PNO1Q9NRX1 252 aaKnown RBP15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 MRPS33Q9Y291 106 aaKnown RBP15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 TRAV18A0A075B6X5 111 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 KANTRA0A1W2PQU2 76 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 TMEM72A0PK05 275 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 FITM1A5D6W6 292 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms