RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 GPRIN2O60269 458 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CTNSO60931 367 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ICOSLGO75144 302 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CD63P08962 238 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ELK1P19419 428 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 THBS3P49746 956 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RTN4RL1Q86UN2 441 aaPredicted RBP12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SEMA6DQ8NFY4 1073 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TGIF2Q9GZN2 237 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CRYBG1Q9Y4K1 1723 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SLC31A2O15432 143 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 HIST1H1CP16403 213 aaKnown RBP12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TRHRP34981 398 aaPredicted RBP12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR13F1Q8NGS4 319 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SPPL3Q8TCT6 385 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PBX4Q9BYU1 374 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SERTM2A0A1B0GWG4 89 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TRABD2BA6NFA1 517 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 A8MVM7 634 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 HMGN4O00479 90 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 QDPRP09417 244 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CATSPERDQ86XM0 798 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR10J5Q8NHC4 309 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SFT2D1Q8WV19 159 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SEMA4CQ9C0C4 833 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SSUH2Q9Y2M2 353 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ACOT8O14734 319 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SLC16A6O15403 523 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 THBS1P07996 1170 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CT45A6P0DMU7 189 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CT45A5P0DMU8 189 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CT45A7P0DMV0 189 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CT45A8P0DMV1 189 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CT45A9P0DMV2 189 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CTU2Q2VPK5 515 aaKnown RBP12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CT45A2Q5DJT8 189 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CT45A1Q5HYN5 189 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 FAM199XQ6PEV8 388 aaPredicted RBP12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RBMS3Q6XE24 437 aaKnown RBP12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 WDR5BQ86VZ2 330 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CT45A3Q8NHU0 189 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ZFPM2Q8WW38 1151 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ING1Q9UK53 422 aaPredicted RBP12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 LAMB4A4D0S4 1761 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 POM121BA6NF01 834 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SOD1P00441 154 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CSF3P09919 207 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 FPR3P25089 353 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 EMDP50402 254 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PCBP3P57721 371 aaKnown RBP12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 HENMT1Q5T8I9 393 aaKnown RBP12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 H1FNTQ75WM6 255 aaPredicted RBP12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ZADH2Q8N4Q0 377 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 APH1AQ96BI3 265 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PINX1Q96BK5 328 aaKnown RBP12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TAF9BQ9HBM6 251 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CTSFQ9UBX1 484 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 C5orf49A4QMS7 147 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SDCBPO00560 298 aaPredicted RBP12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SPINT2O43291 252 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PI3P19957 117 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TMEM52BQ4KMG9 183 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 VASH2Q86V25 355 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 LYSMD2Q8IV50 215 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TSLPQ969D9 159 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 LRFN5Q96NI6 719 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 KCNG2Q9UJ96 466 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RAB22AQ9UL26 194 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ZNF346Q9UL40 294 aaKnown RBP12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PADI1Q9ULC6 663 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 A0A1W2PR48 441 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR2A25A4D2G3 310 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 KRBOX1C9JBD0 128 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 EDIL3O43854 480 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CD14P08571 375 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RRADP55042 308 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 DMWDQ09019 674 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ZNF718Q3SXZ3 478 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 H2BFWTQ7Z2G1 175 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR2G3Q8NGZ4 309 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SHARPINQ9H0F6 387 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 WASH6PQ9NQA3 447 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RBFOX1Q9NWB1 397 aaKnown RBP12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 GHRLQ9UBU3 117 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR51B4Q9Y5P0 310 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 V9GYS6 101 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 KLRC4-KLRK1H3BQV0 150 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 UBL3O95164 117 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RPL27P61353 136 aaKnown RBP12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CMTM2Q8TAZ6 248 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 MS4A6EQ96DS6 147 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR52A5Q9H2C5 316 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 YIF1AO95070 293 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 IAPPP10997 89 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ALOX5APP20292 161 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CNR1P21554 472 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 F2RP25116 425 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ARNTP27540 789 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 BAMBIQ13145 260 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms