RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 PHYHO14832 338 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 LMX1BO60663 402 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 DXOO77932 396 aaKnown RBP12.25□□□□□ -0.45
BCCIP-202ENST00000299130 FOLR1P15328 257 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 PGCP20142 388 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 NFYAP23511 347 aaPredicted RBP12.25□□□□□ -0.45
BCCIP-202ENST00000299130 CSF2RBP32927 897 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 RAP2BP61225 183 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 EIF2B1Q14232 305 aaKnown RBP12.25□□□□□ -0.45
BCCIP-202ENST00000299130 ARHGAP40Q5TG30 622 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 C1orf140Q5VVS0 124 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 HLA-DQA1Q5Y7H0 255 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 TMEM225Q6GV28 225 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 KRT77Q7Z794 578 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 OR51A2Q8NGJ7 313 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 OR1J4Q8NGS1 313 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 GPR119Q8TDV5 335 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 C15orf40Q8WUR7 153 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 ASB5Q8WWX0 329 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 OIT3Q8WWZ8 545 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 MARVELD3Q96A59 401 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 WBP1Q96G27 269 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 ZNF587Q96SQ5 575 aaPredicted RBP12.25□□□□□ -0.45
BCCIP-202ENST00000299130 GSX2Q9BZM3 304 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 TXNIPQ9H3M7 391 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 CGGBP1Q9UFW8 167 aaPredicted RBP12.25□□□□□ -0.45
BCCIP-202ENST00000299130 COA3Q9Y2R0 106 aaPredicted RBP12.25□□□□□ -0.45
BCCIP-202ENST00000299130 LRP12Q9Y561 859 aa12.25□□□□□ -0.45
BCCIP-202ENST00000299130 LOC101059948A0A1B0GTJ6 334 aa12.24□□□□□ -0.45
BCCIP-202ENST00000299130 PLPP3O14495 311 aa12.24□□□□□ -0.45
BCCIP-202ENST00000299130 ADAM10O14672 748 aa12.24□□□□□ -0.45
BCCIP-202ENST00000299130 CSF1P09603 554 aa12.24□□□□□ -0.45
BCCIP-202ENST00000299130 RRASP10301 218 aa12.24□□□□□ -0.45
BCCIP-202ENST00000299130 ZNF35P13682 527 aa12.24□□□□□ -0.45
BCCIP-202ENST00000299130 SLC18B1Q6NT16 456 aa12.24□□□□□ -0.45
BCCIP-202ENST00000299130 TSTD1Q8NFU3 115 aa12.24□□□□□ -0.45
BCCIP-202ENST00000299130 LRRC20Q8TCA0 184 aa12.24□□□□□ -0.45
BCCIP-202ENST00000299130 DUSP19Q8WTR2 217 aa12.24□□□□□ -0.45
BCCIP-202ENST00000299130 MSANTD3Q96H12 275 aa12.24□□□□□ -0.45
BCCIP-202ENST00000299130 DHRS9Q9BPW9 319 aa12.24□□□□□ -0.45
BCCIP-202ENST00000299130 DUSP15Q9H1R2 295 aaPredicted RBP12.24□□□□□ -0.45
BCCIP-202ENST00000299130 VSX1Q9NZR4 365 aaPredicted RBP12.24□□□□□ -0.45
BCCIP-202ENST00000299130 EPHA6Q9UF33 1036 aa12.24□□□□□ -0.45
BCCIP-202ENST00000299130 MRPS18BQ9Y676 258 aaKnown RBP12.24□□□□□ -0.45
BCCIP-202ENST00000299130 LOC100289279A0A1B0GTE1 492 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 A0A1W2PQD3 144 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 RHPN2P1A8MT19 583 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 GOSR2O14653 212 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 FADS1O60427 444 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 EIF4E2O60573 245 aaKnown RBP12.23□□□□□ -0.45
BCCIP-202ENST00000299130 CFPP27918 469 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 POLR2HP52434 150 aaKnown RBP12.23□□□□□ -0.45
BCCIP-202ENST00000299130 SCAND1P57086 179 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 FMODQ06828 376 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 NHLRC3Q5JS37 347 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 OR10K2Q6IF99 312 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 C3P1Q6ZMU1 363 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 SYT13Q7L8C5 426 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 CATSPERDQ86XM0 798 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 ZDHHC12Q96GR4 267 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 VN1R1Q9GZP7 353 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 ZMAT3Q9HA38 289 aaKnown RBP12.23□□□□□ -0.45
BCCIP-202ENST00000299130 OPN4Q9UHM6 478 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 CDV3Q9UKY7 258 aaKnown RBP12.23□□□□□ -0.45
BCCIP-202ENST00000299130 MKL2Q9ULH7 1088 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 DHDHQ9UQ10 334 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 ARID1BQ8NFD5 2236 aaPredicted RBP12.23□□□□□ -0.45
BCCIP-202ENST00000299130 A0A1W2PPC1 479 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 ARPC5O15511 151 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 ZNF354AO60765 605 aaPredicted RBP12.23□□□□□ -0.45
BCCIP-202ENST00000299130 MT-ATP6P00846 226 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 CD27P26842 260 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 PRSS3P35030 304 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 ROM1Q03395 351 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 C14orf28Q4W4Y0 310 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 GLYATL3Q5SZD4 288 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 TMEM65Q6PI78 240 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 CLEC1AQ8NC01 280 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 OR6N1Q8NGY5 312 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 STK35Q8TDR2 534 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 ASB17Q8WXJ9 295 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 PNPLA2Q96AD5 504 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 ZNF304Q9HCX3 659 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 ZNF224Q9NZL3 707 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 FREM3P0C091 2139 aa12.23□□□□□ -0.45
BCCIP-202ENST00000299130 FER1L5A0AVI2 2057 aa12.22□□□□□ -0.45
BCCIP-202ENST00000299130 ASXL3Q9C0F0 2248 aa12.22□□□□□ -0.45
BCCIP-202ENST00000299130 IGKV1D-43A0A0B4J1Z2 117 aa12.22□□□□□ -0.45
BCCIP-202ENST00000299130 DCDC2BA2VCK2 349 aa12.22□□□□□ -0.45
BCCIP-202ENST00000299130 HSPB2A8KAH6 182 aa12.22□□□□□ -0.45
BCCIP-202ENST00000299130 A8MVM7 634 aa12.22□□□□□ -0.45
BCCIP-202ENST00000299130 TO15178 435 aa12.22□□□□□ -0.45
BCCIP-202ENST00000299130 SRSF10O75494 262 aaKnown RBP12.22□□□□□ -0.45
BCCIP-202ENST00000299130 AKAIN1P0CW23 69 aa12.22□□□□□ -0.45
BCCIP-202ENST00000299130 FBLP22087 321 aaKnown RBP12.22□□□□□ -0.45
BCCIP-202ENST00000299130 FAUP35544 74 aaKnown RBP12.22□□□□□ -0.45
BCCIP-202ENST00000299130 MAP2K6P52564 334 aa12.22□□□□□ -0.45
BCCIP-202ENST00000299130 HLXQ14774 488 aaPredicted RBP12.22□□□□□ -0.45
BCCIP-202ENST00000299130 HSPB2Q16082 182 aa12.22□□□□□ -0.45
BCCIP-202ENST00000299130 MOGAT2Q3SYC2 334 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms