RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 NDUFAF4Q9P032 175 aa10.6□□□□□ -0.71
HMGB2-201ENST00000296503 RBMX2Q9Y388 322 aaKnown RBP10.6□□□□□ -0.71
HMGB2-201ENST00000296503 ORC6Q9Y5N6 252 aa10.6□□□□□ -0.71
HMGB2-201ENST00000296503 ANKRD17O75179 2603 aaKnown RBP10.6□□□□□ -0.71
HMGB2-201ENST00000296503 A0A087WUU8 490 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 LOC110117498-PIK3R3F6TDL0 507 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 DIRAS1O95057 198 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 PLAUP00749 431 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 APOA1P02647 267 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 F13BP05160 661 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 H1F0P07305 194 aaKnown RBP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 CD3EP07766 207 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 SAGP10523 405 aaPredicted RBP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 LOXP28300 417 aaPredicted RBP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 AQP2P41181 271 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 ZNF83P51522 516 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 PRPS1P60891 318 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 LSM11P83369 360 aaKnown RBP eCLIP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 VLDLRP98155 873 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 LAPTM4AQ15012 233 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 CDK10Q15131 360 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 HIKESHIQ53FT3 197 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 NCMAPQ5T1S8 102 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 STEAP3Q658P3 488 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 NHLRC1Q6VVB1 395 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 POC5Q8NA72 575 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 C1orf162Q8NEQ5 155 aaPredicted RBP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 ACOT11Q8WXI4 607 aaPredicted RBP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 TRAF4Q9BUZ4 470 aaPredicted RBP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 MARCH7Q9H992 704 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 CRLF2Q9HC73 371 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 GPR35Q9HC97 309 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 ACOT13Q9NPJ3 140 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 SLC17A5Q9NRA2 495 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 MAN2C1Q9NTJ4 1040 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 ZNF221Q9UK13 617 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 AMDHD2Q9Y303 409 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 PEX16Q9Y5Y5 336 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 SLC25A15Q9Y619 301 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 A0A096LPE4 126 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 A0A1W2PPZ6 126 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 A0A1W2PRG6 482 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 DPRXA6NFQ7 191 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 FAM25AB3EWG3 89 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 FAM25CB3EWG5 89 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 FAM25GB3EWG6 89 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 CCNKO75909 580 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 WNT11O96014 354 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 CST1P01037 141 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 RAF1P04049 648 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 IST1P53990 364 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 UBE2NP61088 152 aaKnown RBP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 ARF1P84077 181 aaKnown RBP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 TEKQ02763 1124 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 RPL18Q07020 188 aaKnown RBP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 BSPH1Q075Z2 132 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 RIPPLY1Q0D2K3 151 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 CEACAM16Q2WEN9 425 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 KLHL17Q6TDP4 642 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 ZNF704Q6ZNC4 412 aaPredicted RBP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 MBOAT2Q6ZWT7 520 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 ZBTB46Q86UZ6 589 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 MEX3DQ86XN8 651 aaKnown RBP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 C20orf196Q8IYI0 205 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 TMEM123Q8N131 208 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 C17orf78Q8N4C9 275 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 WDR31Q8NA23 367 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 OR1K1Q8NGR3 316 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 LIPHQ8WWY8 451 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 SGCDQ92629 289 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 LRR1Q96L50 414 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 ADAD1Q96M93 576 aaKnown RBP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 ANKRD19PQ9H560 264 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 TMEFF2Q9UIK5 374 aaPredicted RBP10.59□□□□□ -0.71
HMGB2-201ENST00000296503 N6AMT1Q9Y5N5 214 aa10.59□□□□□ -0.71
HMGB2-201ENST00000296503 EFCAB9A8MZ26 197 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 MCIDASD6RGH6 385 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 RPL36A-HNRNPH2H7BZ11 118 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 M0R1B8 84 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 RGS10O43665 173 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 MAKP20794 623 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 TGFBR2P37173 567 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 CSNK1A1P48729 337 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 MELKQ14680 651 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 ACKR1Q16570 336 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 PHYHD1Q5SRE7 291 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 SIGIRRQ6IA17 410 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 ANKRD16Q6P6B7 361 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 PODNL1Q6PEZ8 512 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 SHQ1Q6PI26 577 aaKnown RBP10.58□□□□□ -0.72
HMGB2-201ENST00000296503 PAMR1Q6UXH9 720 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 OR52J3Q8NH60 311 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 OR51A7Q8NH64 312 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 OR6X1Q8NH79 312 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 MOSPD2Q8NHP6 518 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 BCL2L2Q92843 193 aaPredicted RBP10.58□□□□□ -0.72
HMGB2-201ENST00000296503 NINJ1Q92982 152 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 PIP5K1AQ99755 562 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 APOL4Q9BPW4 351 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 POFUT2Q9Y2G5 429 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms