RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ZNF726A6NNF4 738 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 TMEM127O75204 238 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 SRSF10O75494 262 aaKnown RBP8.55□□□□□ -1.04
TRIM55-201ENST00000276573 WNT11O96014 354 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 IGHG1P01857 330 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 ZNF43P17038 809 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 KLK2P20151 261 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 LAP3P28838 519 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 TALDO1P37837 337 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 PITPNBP48739 271 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 CLRN1P58418 232 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 RAC1P63000 192 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 TRIP6Q15654 476 aaKnown RBP8.55□□□□□ -1.04
TRIM55-201ENST00000276573 RAET1LQ5VY80 246 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 ZNF544Q6NX49 715 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 SLC25A47Q6Q0C1 308 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 DEGS2Q6QHC5 323 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 HDDC2Q7Z4H3 204 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 DCXRQ7Z4W1 244 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 LRRTM1Q86UE6 522 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 CATSPERDQ86XM0 798 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 BEST3Q8N1M1 668 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 ZNF433Q8N7K0 673 aaPredicted RBP8.55□□□□□ -1.04
TRIM55-201ENST00000276573 DTX3Q8N9I9 347 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 C19orf18Q8NEA5 215 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 IL17RDQ8NFM7 739 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 OR4M2Q8NGB6 313 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 ST7LQ8TDW4 575 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 PPP1R14AQ96A00 147 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 THOC3Q96J01 351 aaKnown RBP8.55□□□□□ -1.04
TRIM55-201ENST00000276573 CMTM3Q96MX0 182 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 C11orf54Q9H0W9 315 aaPredicted RBP8.55□□□□□ -1.04
TRIM55-201ENST00000276573 SLITRK2Q9H156 845 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 TCF7L1Q9HCS4 588 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 STMN3Q9NZ72 180 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 SLC22A13Q9Y226 551 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 LRP12Q9Y561 859 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 V9GY05 133 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 FRYLO94915 3013 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 KMT2EQ8IZD2 1858 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 A0A1B0GVC2 190 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 A6NIN4 97 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 AIPO00170 330 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 RAD1O60671 282 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 EIF1BO60739 113 aaKnown RBP8.54□□□□□ -1.04
TRIM55-201ENST00000276573 TNFSF15O95150 251 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 ZNF17P17021 662 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 ADRA2CP18825 462 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 RBMS1P29558 406 aaKnown RBP8.54□□□□□ -1.04
TRIM55-201ENST00000276573 SRD5A2P31213 254 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 B3GALT5-AS1P59052 145 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 ODF4Q2M2E3 257 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 HES5Q5TA89 166 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 TRIQKQ629K1 86 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 OR7E24Q6IFN5 339 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 JMJD6Q6NYC1 403 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-201ENST00000276573 PIP4P1Q86T03 277 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 LINC00346Q8IVM7 164 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 CELF2-AS1Q8N7Q2 184 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 NOXO1Q8NFA2 376 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 OR10H5Q8NGA6 315 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 OR51A4Q8NGJ6 313 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 ADAMTS14Q8WXS8 1223 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 MCHR2Q969V1 340 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 PIGQQ9BRB3 760 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 NAA11Q9BSU3 229 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-201ENST00000276573 FAM117AQ9C073 453 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 SLC22A4Q9H015 551 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 PCDHGA9Q9Y5G4 932 aaKnown RBP8.54□□□□□ -1.04
TRIM55-201ENST00000276573 MUC3AQ02505 3323 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 GPR179Q6PRD1 2367 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 SDK2Q58EX2 2172 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 VPS13AQ96RL7 3174 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 MYO15AQ9UKN7 3530 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 NCOR1O75376 2440 aa8.54□□□□□ -1.04
TRIM55-201ENST00000276573 A0A0G2JMM0 328 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 A0A0J9YW62 118 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 A0A1W2PPB8 328 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 A0A1W2PRS3 328 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 KIR3DP1A8MWS1 328 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 BOLA2-SMG1P6H3BVE0 249 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 TLX3O43711 291 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CNR1P21554 472 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CYB561P49447 251 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 GPR85P60893 370 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CSNK2A1P68400 391 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-201ENST00000276573 MFGE8Q08431 387 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-201ENST00000276573 MFAP5Q13361 173 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 TOMM20Q15388 145 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CSRP2Q16527 193 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 HIST3H3Q16695 136 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CARD17Q5XLA6 110 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 PYHIN1Q6K0P9 492 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 LRFN4Q6PJG9 635 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 RAB43Q86YS6 212 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 ZNF671Q8TAW3 534 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 ADAMTS17Q8TE56 1095 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 THRSPQ92748 146 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 TMEM106AQ96A25 262 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 ABHD1Q96SE0 405 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms