RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 RAB22AQ9UL26 194 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 IGHV3-15A0A0B4J1V0 119 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 TOR1AO14656 332 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 ETHE1O95571 254 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 PIPP12273 146 aaPredicted RBP10.49□□□□□ -0.73
USP53-201ENST00000274030 GFERP55789 205 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 ISL1P61371 349 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 RNF4P78317 190 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 OBP2AQ9NY56 170 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 ZNF346Q9UL40 294 aaKnown RBP10.49□□□□□ -0.73
USP53-201ENST00000274030 MRPS2Q9Y399 296 aaKnown RBP10.49□□□□□ -0.73
USP53-201ENST00000274030 SHISA7A6NL88 538 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 EXT1Q16394 746 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 ACKR1Q16570 336 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 DUSP6Q16828 381 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 CMIPQ8IY22 773 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 ZADH2Q8N4Q0 377 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 NANOGP1Q8N7R0 232 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 DEFB108BQ8NET1 73 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 OR10R2Q8NGX6 335 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 MFRPQ9BY79 579 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 POFUT1Q9H488 388 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 DEGS1O15121 323 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 LINC01565O15544 149 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 ICOSLGO75144 302 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 EIF2DP41214 584 aaKnown RBP10.49□□□□□ -0.73
USP53-201ENST00000274030 IHHQ14623 411 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 TBC1D28Q2M2D7 210 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.49□□□□□ -0.73
USP53-201ENST00000274030 HIPK2Q9H2X6 1198 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 MED29Q9NX70 200 aa10.49□□□□□ -0.73
USP53-201ENST00000274030 ING1Q9UK53 422 aaPredicted RBP10.49□□□□□ -0.73
USP53-201ENST00000274030 FAM221AA4D161 298 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 C9orf152Q5JTZ5 239 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 C6orf15Q6UXA7 325 aaPredicted RBP10.48□□□□□ -0.73
USP53-201ENST00000274030 LYSMD2Q8IV50 215 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 SVBPQ8N300 66 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 SEMA6DQ8NFY4 1073 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 ERVMER34-1Q9H9K5 563 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 A0A1B0GTL3 188 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 LOC107986453A0A1B0GWG9 222 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 OIP5O43482 229 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 ITGBL1O95965 494 aaPredicted RBP10.48□□□□□ -0.73
USP53-201ENST00000274030 MT-ATP6P00846 226 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 CD22P20273 847 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 SNRPGP62308 76 aaKnown RBP10.48□□□□□ -0.73
USP53-201ENST00000274030 ARHGAP11BQ3KRB8 267 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 MDGA2Q7Z553 956 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 PKMYT1Q99640 499 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 BARHL1Q9BZE3 327 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 TARM1B6A8C7 271 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 LGALS4P56470 323 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 HBG1P69891 147 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 HBG2P69892 147 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 GDPD3Q7L5L3 318 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 MBOAT4Q96T53 435 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 CTSLP07711 333 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 SLC6A12P48065 614 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 OR2B11Q5JQS5 317 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 C16orf52Q8NHV5 167 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 PHF7Q9BWX1 381 aaPredicted RBP10.48□□□□□ -0.73
USP53-201ENST00000274030 UBE2ZQ9H832 354 aaPredicted RBP10.48□□□□□ -0.73
USP53-201ENST00000274030 PURGQ9UJV8 347 aaKnown RBP10.48□□□□□ -0.73
USP53-201ENST00000274030 TIAM2Q8IVF5 1701 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 ZNF891A8MT65 544 aaPredicted RBP10.48□□□□□ -0.73
USP53-201ENST00000274030 EIF4E2O60573 245 aaKnown RBP10.48□□□□□ -0.73
USP53-201ENST00000274030 FOLR1P15328 257 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 ELK1P19419 428 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 GRB2P62993 217 aaKnown RBP10.48□□□□□ -0.73
USP53-201ENST00000274030 SLC10A1Q14973 349 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 SLC35D3Q5M8T2 416 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 ANKRD33Q7Z3H0 272 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 FAM109AQ8N4B1 249 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 LILRB4Q8NHJ6 448 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 FGF14Q92915 247 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 C3orf49Q96BT1 292 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 CTSFQ9UBX1 484 aa10.48□□□□□ -0.73
USP53-201ENST00000274030 A0A0B4J203 849 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 DEFA4P12838 97 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 FAPQ12884 760 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 FAAP20Q6NZ36 180 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 TDHQ8IZJ6 230 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 FBXL6Q8N531 539 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 SLC30A7Q8NEW0 376 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 BAHD1Q8TBE0 780 aaPredicted RBP10.47□□□□□ -0.73
USP53-201ENST00000274030 MENTQ9BUN1 341 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 ASIC5Q9NY37 505 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 ETV7Q9Y603 341 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 RRP8O43159 456 aaKnown RBP10.47□□□□□ -0.73
USP53-201ENST00000274030 MGST1P10620 155 aaKnown RBP10.47□□□□□ -0.73
USP53-201ENST00000274030 APOBEC1P41238 236 aaKnown RBP10.47□□□□□ -0.73
USP53-201ENST00000274030 DPTQ07507 201 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 IL34Q6ZMJ4 242 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 DEFB123Q8N688 67 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 OR52I2Q8NH67 350 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 ORAI1Q96D31 301 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 PLK3Q9H4B4 646 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 NECAP2Q9NVZ3 263 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 C17orf112F2Z3M2 114 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 AQP7O14520 342 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms