RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 SEC22AQ96IW7 307 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 ZNF587Q96SQ5 575 aaPredicted RBP16.67■□□□□ 0.26
LRP3-201ENST00000253193 TMEM185BQ9H7F4 350 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 TMED7Q9Y3B3 224 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 IFNA6P05013 189 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 NUP62P37198 522 aaPredicted RBP16.67■□□□□ 0.26
LRP3-201ENST00000253193 SEC61A1P61619 476 aaKnown RBP16.67■□□□□ 0.26
LRP3-201ENST00000253193 EGR4Q05215 589 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 CCINQ13939 588 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 UBXN2BQ14CS0 331 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 OR7A5Q15622 319 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 TMEM205Q6UW68 189 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 PTPMT1Q8WUK0 201 aaPredicted RBP16.67■□□□□ 0.26
LRP3-201ENST00000253193 NUDT22Q9BRQ3 303 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 EMC3Q9P0I2 261 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 B9D1Q9UPM9 204 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 KLHL24Q6TFL4 600 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 CDC20BQ86Y33 519 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 FAM71CQ8NEG0 241 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 OTOSQ8NHW6 89 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 C4orf45Q96LM5 186 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 CMTM3Q96MX0 182 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 NUDT9Q9BW91 350 aa16.67■□□□□ 0.26
LRP3-201ENST00000253193 SPAG17Q6Q759 2223 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 H2BFMP0C1H6 154 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 HTR2CP28335 458 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 RADILQ96JH8 1075 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 CLEC1BQ9P126 229 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 MYO15AQ9UKN7 3530 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 LOC100289279A0A1B0GTE1 492 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.66■□□□□ 0.26
LRP3-201ENST00000253193 TMEM269A0A1B0GVZ9 245 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.66■□□□□ 0.26
LRP3-201ENST00000253193 CTAG2O75638 210 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 ITGA5P08648 1049 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 HOXD4P09016 255 aaPredicted RBP16.66■□□□□ 0.26
LRP3-201ENST00000253193 ACTBP60709 375 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 ACTG1P63261 375 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 SLC17A1Q14916 467 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 GPAT4Q86UL3 456 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 ZNF584Q8IVC4 421 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 MUC20Q8N307 709 aaPredicted RBP16.66■□□□□ 0.26
LRP3-201ENST00000253193 PTDSS2Q9BVG9 487 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 A0A1W2PPC4 97 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 PRSS37A4D1T9 235 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 H7C417 338 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 CD38P28907 300 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 SLC37A1P57057 533 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 OR1D5P58170 312 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 RPL27P61353 136 aaKnown RBP16.66■□□□□ 0.26
LRP3-201ENST00000253193 ZNF101Q8IZC7 436 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 MARVELD3Q96A59 401 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 MICU1Q9BPX6 476 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 POFUT1Q9H488 388 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 MTFP1Q9UDX5 166 aa16.66■□□□□ 0.26
LRP3-201ENST00000253193 REV3LO60673 3130 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 ZNF736B4DX44 427 aaPredicted RBP16.65■□□□□ 0.26
LRP3-201ENST00000253193 ELFN2Q5R3F8 820 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 TMUB2Q71RG4 321 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 ZNF679Q8IYX0 411 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 CHST6Q9GZX3 395 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 SLC2A4RGQ9NR83 387 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 SDHAF2Q9NX18 166 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 LDOC1O95751 146 aaPredicted RBP16.65■□□□□ 0.26
LRP3-201ENST00000253193 GIMD1P0DJR0 217 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 CTLA4P16410 223 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 EGR3Q06889 387 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 EEF1A1P5Q5VTE0 462 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 C1orf140Q5VVS0 124 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 ZNF626Q68DY1 528 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 C17orf107Q6ZR85 190 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 PRSS35Q8N3Z0 413 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 IFT46Q9NQC8 304 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 C13orf42A0A1B0GVH6 325 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 APOC3P02656 99 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 ASAH2BP0C7U1 165 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 APEHP13798 732 aaKnown RBP16.65■□□□□ 0.26
LRP3-201ENST00000253193 RPS4XP62701 263 aaKnown RBP16.65■□□□□ 0.26
LRP3-201ENST00000253193 POU3F1Q03052 451 aaPredicted RBP16.65■□□□□ 0.26
LRP3-201ENST00000253193 EXOSC6Q5RKV6 272 aaKnown RBP16.65■□□□□ 0.26
LRP3-201ENST00000253193 GSG1LQ6UXU4 331 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 FAM122BQ7Z309 247 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 OR2AK2Q8NG84 335 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 ZNF304Q9HCX3 659 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 HHLA2Q9UM44 414 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 KCNMB2Q9Y691 235 aa16.65■□□□□ 0.26
LRP3-201ENST00000253193 TMEM82A0PJX8 343 aa16.64■□□□□ 0.25
LRP3-201ENST00000253193 BLACEA4D250 179 aa16.64■□□□□ 0.25
LRP3-201ENST00000253193 TMEM235A6NFC5 223 aa16.64■□□□□ 0.25
LRP3-201ENST00000253193 TLCD2A6NGC4 264 aa16.64■□□□□ 0.25
LRP3-201ENST00000253193 ZNF254O75437 659 aa16.64■□□□□ 0.25
LRP3-201ENST00000253193 VSIG10L2P0DP72 767 aa16.64■□□□□ 0.25
LRP3-201ENST00000253193 B3GNTL1Q67FW5 361 aaPredicted RBP16.64■□□□□ 0.25
LRP3-201ENST00000253193 CFAP77Q6ZQR2 320 aa16.64■□□□□ 0.25
LRP3-201ENST00000253193 IQCF2Q8IXL9 164 aa16.64■□□□□ 0.25
LRP3-201ENST00000253193 STPG2Q8N412 459 aa16.64■□□□□ 0.25
LRP3-201ENST00000253193 BPIFB2Q8N4F0 458 aa16.64■□□□□ 0.25
LRP3-201ENST00000253193 OR6M1Q8NGM8 313 aa16.64■□□□□ 0.25
LRP3-201ENST00000253193 ABHD6Q9BV23 337 aa16.64■□□□□ 0.25
LRP3-201ENST00000253193 EMC6Q9BV81 110 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms