RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 TMEM89A2RUT3 159 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 ZSCAN5BA6NJL1 495 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 BLOC1S5-TXNDC5H3BN57 136 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 PLPP2O43688 288 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 CDC14BO60729 498 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 OR5F1O95221 314 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 SLC2A10O95528 541 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 IGHV1-46P01743 117 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 HIST1H2ABP04908 130 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 F13BP05160 661 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 LCKP06239 509 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 UMPSP11172 480 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 ZNF32P17041 273 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 TNFRSF1BP20333 461 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 MPV17P39210 176 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 RAD52P43351 418 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 DAP3P51398 398 aaKnown RBP8.75□□□□□ -1.01
VPS50-201ENST00000251739 ZNF84P51523 738 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 SELENOVP59797 346 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 PLP2Q04941 152 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 FMODQ06828 376 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 NFYCQ13952 458 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 RABL3Q5HYI8 236 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 NANOGP8Q6NSW7 305 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 ACSM5Q6NUN0 579 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 SLC25A47Q6Q0C1 308 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 C12orf54Q6X4T0 127 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 FOXL2NBQ6ZUU3 175 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 RFPL4BQ6ZWI9 263 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 USP51Q70EK9 711 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 HIST3H2AQ7L7L0 130 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 TEX29Q8N6K0 151 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 SYT14Q8NB59 555 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 MOSPD2Q8NHP6 518 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 ZNF418Q8TF45 676 aaPredicted RBP8.75□□□□□ -1.01
VPS50-201ENST00000251739 FAM216AQ8WUB2 273 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 IPCEF1Q8WWN9 437 aaPredicted RBP8.75□□□□□ -1.01
VPS50-201ENST00000251739 HDAC2Q92769 488 aaKnown RBP8.75□□□□□ -1.01
VPS50-201ENST00000251739 HIST1H2ACQ93077 130 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 RAB39BQ96DA2 213 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 PLA2G12AQ9BZM1 189 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 RNF121Q9H920 327 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 SAP30LQ9HAJ7 183 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 INIPQ9NRY2 104 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 HIF3AQ9Y2N7 669 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 TGP01266 2768 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 CMYA5Q8N3K9 4069 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 A0A0G2JMP0 313 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 A0A0X1KG70 313 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 CLDN25C9JDP6 229 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 MCIDASD6RGH6 385 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 H3BSA7 217 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 J3QLI3 93 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 EDF1O60869 148 aaKnown RBP8.74□□□□□ -1.01
VPS50-201ENST00000251739 UBOX5O94941 541 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 MPZL1O95297 269 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 IGHMP01871 453 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 THRBP10828 461 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 ANPEPP15144 967 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 FUT1P19526 365 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 MAKP20794 623 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 STOMP27105 288 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 CDAP32320 146 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 APLNRP35414 380 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 TEKQ02763 1124 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 MVKQ03426 396 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 GLO1Q04760 184 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 FHL1Q13642 323 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 MOGQ16653 247 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 FAM27BQ5VT28 67 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 MBNL2Q5VZF2 373 aaKnown RBP8.74□□□□□ -1.01
VPS50-201ENST00000251739 FAHD2BQ6P2I3 314 aaPredicted RBP8.74□□□□□ -1.01
VPS50-201ENST00000251739 LRRC18Q8N456 261 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 OR4M2Q8NGB6 313 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 OR8J3Q8NGG0 315 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 OR1J1Q8NGS3 322 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 TMEM239Q8WW34 195 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 SGTBQ96EQ0 304 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 ELMOD3Q96FG2 381 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 FAHD2AQ96GK7 314 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 MAGEB18Q96M61 343 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 WNT5BQ9H1J7 359 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 LRMDAQ9H2I8 198 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 TXNIPQ9H3M7 391 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 ESM1Q9NQ30 184 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 STX18Q9P2W9 335 aaKnown RBP8.74□□□□□ -1.01
VPS50-201ENST00000251739 OPN4Q9UHM6 478 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 RIMS3Q9UJD0 308 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 KLHL21Q9UJP4 597 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 BAG5Q9UL15 447 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 SH3GLB1Q9Y371 365 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 NOTCH1P46531 2555 aa8.74□□□□□ -1.01
VPS50-201ENST00000251739 PPIAL4EA0A075B759 164 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 PPIAL4CA0A0B4J2A2 164 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 PPIAL4DF5H284 164 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 PIP5K1CO60331 668 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 MT-ND5P03915 603 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 CD55P08174 381 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 PPIAL4FP0DN26 164 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 NR2C1P13056 603 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms