RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 MT-ATP6P00846 226 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 HRGP04196 525 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 VSIG10L2P0DP72 767 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 CTLA4P16410 223 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 NAT1P18440 290 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 ABCD3P28288 659 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 FAUP35544 74 aaKnown RBP12.95□□□□□ -0.34
HIF3A-202ENST00000244303 RBMS2Q15434 407 aaKnown RBP12.95□□□□□ -0.34
HIF3A-202ENST00000244303 C2orf76Q3KRA6 126 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 NHLRC1Q6VVB1 395 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 GINS4Q9BRT9 223 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 TMED7Q9Y3B3 224 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 TRAV18A0A075B6X5 111 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 IGLV1-36A0A0B4J1U3 117 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 A0A1W2PPL8 197 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 PLSCR5A0PG75 271 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 OR2M5A3KFT3 312 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 WNT11O96014 354 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 FCER2P06734 321 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 CSF1P09603 554 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 CXCL2P19875 107 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 CFPP27918 469 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 OR1D5P58170 312 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 STARD6P59095 220 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 ADAM8P78325 824 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 DHODHQ02127 395 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 MFGE8Q08431 387 aaPredicted RBP12.95□□□□□ -0.34
HIF3A-202ENST00000244303 MELKQ14680 651 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 OPCMLQ14982 345 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 TEX30Q5JUR7 227 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 OR5M10Q6IEU7 315 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 OR7E24Q6IFN5 339 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 SLC18B1Q6NT16 456 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 PLPP7Q8NBV4 271 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 OR1L3Q8NH93 324 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 RNF128Q8TEB7 428 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 ASB17Q8WXJ9 295 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 RBPMSQ93062 196 aaKnown RBP12.95□□□□□ -0.34
HIF3A-202ENST00000244303 FAM3DQ96BQ1 224 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 MVB12AQ96EY5 273 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 ELMOD3Q96FG2 381 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 GSX2Q9BZM3 304 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 TXNIPQ9H3M7 391 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 SPAG17Q6Q759 2223 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 ABCA7Q8IZY2 2146 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 SLC17A2O00624 439 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 NPIPB7O75200 414 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 PIAS2O75928 621 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 OR2A4O95047 310 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 FBLP22087 321 aaKnown RBP12.94□□□□□ -0.34
HIF3A-202ENST00000244303 ARL4DP49703 201 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 POLR2HP52434 150 aaKnown RBP12.94□□□□□ -0.34
HIF3A-202ENST00000244303 RAP2BP61225 183 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 RAB11BQ15907 218 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 NDUFAF7Q7L592 441 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 SLC36A1Q7Z2H8 476 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 MDGA2Q7Z553 956 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 KRT77Q7Z794 578 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 ADGRG3Q86Y34 549 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 THRSPQ92748 146 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 DAZLQ92904 295 aaKnown RBP12.94□□□□□ -0.34
HIF3A-202ENST00000244303 C8orf44Q96CB5 159 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 OR2A7Q96R45 310 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 OR11A1Q9GZK7 315 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 C12orf4Q9NQ89 552 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 TAS2R8Q9NYW2 309 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 VSX1Q9NZR4 365 aaPredicted RBP12.94□□□□□ -0.34
HIF3A-202ENST00000244303 COPS7AQ9UBW8 275 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 CEP192Q8TEP8 1941 aa12.94□□□□□ -0.34
HIF3A-202ENST00000244303 TO15178 435 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 TSPAN9O75954 239 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 DXOO77932 396 aaKnown RBP12.93□□□□□ -0.34
HIF3A-202ENST00000244303 GTF2F2P13984 249 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 C4BPBP20851 252 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 BCKDHBP21953 392 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 HSD11B2P80365 405 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 EIF2B1Q14232 305 aaKnown RBP12.93□□□□□ -0.34
HIF3A-202ENST00000244303 C1orf189Q5VU69 101 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 C1orf140Q5VVS0 124 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 SLC29A4Q7RTT9 530 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 IQCF2Q8IXL9 164 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 OR1N1Q8NGS0 311 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 PRO3102Q9H379 93 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 ZNF304Q9HCX3 659 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 DHDHQ9UQ10 334 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 LOC100289279A0A1B0GTE1 492 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 TMEM272A0A1B0GTI8 110 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 SLC22A23A1A5C7 686 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 A8MVM7 634 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 RLN1P04808 185 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 PNLIPRP2P54317 469 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 ROM1Q03395 351 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 PRSS42Q7Z5A4 293 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 OR51S1Q8NGJ8 323 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 OR1J4Q8NGS1 313 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 GPR119Q8TDV5 335 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 ZNF587Q96SQ5 575 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-202ENST00000244303 ABHD6Q9BV23 337 aa12.93□□□□□ -0.34
HIF3A-202ENST00000244303 ATG5Q9H1Y0 275 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms