RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ST6GALNAC2Q9UJ37 374 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 KCNG2Q9UJ96 466 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CSAG2Q9Y5P2 127 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GABRPO00591 440 aa17.52■□□□□ 0.39
TNFRSF1A-201ENST00000162749 IGHG1P01857 330 aa17.52■□□□□ 0.39
TNFRSF1A-201ENST00000162749 PTGS2P35354 604 aa17.52■□□□□ 0.39
TNFRSF1A-201ENST00000162749 DEFA1P59665 94 aa17.52■□□□□ 0.39
TNFRSF1A-201ENST00000162749 DEFA3P59666 94 aa17.52■□□□□ 0.39
TNFRSF1A-201ENST00000162749 POU4F3Q15319 338 aa17.52■□□□□ 0.39
TNFRSF1A-201ENST00000162749 MEP1BQ16820 701 aa17.52■□□□□ 0.39
TNFRSF1A-201ENST00000162749 HBMQ6B0K9 141 aa17.52■□□□□ 0.39
TNFRSF1A-201ENST00000162749 NOXO1Q8NFA2 376 aa17.52■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SLC26A10Q8NG04 563 aa17.52■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SCMH1Q96GD3 660 aa17.52■□□□□ 0.39
TNFRSF1A-201ENST00000162749 NAA11Q9BSU3 229 aaPredicted RBP17.52■□□□□ 0.39
TNFRSF1A-201ENST00000162749 TMEM14AQ9Y6G1 99 aa17.52■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CACNA1GO43497 2377 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ZNF593O00488 134 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SMAD9O15198 467 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 MPZL1O95297 269 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 AZGP1P25311 298 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 TNFSF10P50591 281 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SIRPAP78324 504 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ADAM8P78325 824 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 HYAL4Q2M3T9 481 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 TMEM91Q6ZNR0 172 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SPATC1Q76KD6 591 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 HDDC2Q7Z4H3 204 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ZFP62Q8NB50 900 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 RBP7Q96R05 134 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 COQ7Q99807 217 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 PAIP2BQ9ULR5 123 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ATMQ13315 3056 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CENPBD1B2RD01 187 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 LINC01387J3KSC0 135 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 DVL2O14641 736 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 EFSO43281 561 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 GAAP10253 952 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 GBX2P52951 348 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CARD18P57730 90 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CLRN1P58418 232 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 PLGLB1Q02325 96 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SLC3A1Q07837 685 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SLC17A1Q14916 467 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CARTPTQ16568 116 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 DEFB109BQ30KR1 87 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ZNF766Q5HY98 468 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 THEM4Q5T1C6 240 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ASB18Q6ZVZ8 466 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CREB3L2Q70SY1 520 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 AMELYQ99218 206 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 TIGARQ9NQ88 270 aa17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 MRM2Q9UI43 246 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-201ENST00000162749 OR8G3PP0DMU2 310 aa17.5■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CD53P19397 219 aa17.5■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CLDN17P56750 224 aa17.5■□□□□ 0.39
TNFRSF1A-201ENST00000162749 FOXC1Q12948 553 aa17.5■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CDK5R1Q15078 307 aa17.5■□□□□ 0.39
TNFRSF1A-201ENST00000162749 C1QTNF12Q5T7M4 302 aa17.5■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CELF2-AS1Q8N7Q2 184 aa17.5■□□□□ 0.39
TNFRSF1A-201ENST00000162749 OR9K2Q8NGE7 335 aa17.5■□□□□ 0.39
TNFRSF1A-201ENST00000162749 OR10D3Q8NH80 312 aa17.5■□□□□ 0.39
TNFRSF1A-201ENST00000162749 OR2V1Q8NHB1 315 aa17.5■□□□□ 0.39
TNFRSF1A-201ENST00000162749 RNF166Q96A37 237 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SMIM19Q96E16 107 aa17.5■□□□□ 0.39
TNFRSF1A-201ENST00000162749 FREM1Q5H8C1 2179 aa17.5■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CD8B2A6NJW9 211 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CASKO14936 926 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 OGG1O15527 345 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CXCL13O43927 109 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 KHDRBS3O75525 346 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ABHD16AO95870 558 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SPARCP09486 303 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CD8BP10966 210 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SPINK2P20155 84 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 GALP22466 123 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 PSMB10P40306 273 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 EIF1AXP47813 144 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 EIF2B2P49770 351 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 HIST3H3Q16695 136 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CCDC58Q4VC31 144 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CARD17Q5XLA6 110 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 IGFL2Q6UWQ7 119 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 THEM6Q8WUY1 208 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 NSMAFQ92636 917 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 GHSRQ92847 366 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ZNF385AQ96PM9 386 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SLC6A15Q9H2J7 730 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 KCNMB2Q9Y691 235 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 MAP1BP46821 2468 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ZNF726A6NNF4 738 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 NPIPA2E9PIF3 369 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 NPIPA3F8WFD2 350 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 IL7P13232 177 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 EGR3Q06889 387 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 RPL22L1Q6P5R6 122 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 FAM131AQ6UXB0 335 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 TRILQ7L0X0 811 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms