RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 EYA2O00167 538 aa26.75■■□□□ 1.87
TSPAN9-208ENST00000640568 LRRC24Q50LG9 513 aa26.74■■□□□ 1.87
TSPAN9-208ENST00000640568 CC2D2BQ6DHV5 1058 aa26.74■■□□□ 1.87
TSPAN9-208ENST00000640568 PUS3Q9BZE2 481 aaKnown RBP26.74■■□□□ 1.87
TSPAN9-208ENST00000640568 CIAO1O76071 339 aa26.74■■□□□ 1.87
TSPAN9-208ENST00000640568 CCDC93Q567U6 631 aa26.74■■□□□ 1.87
TSPAN9-208ENST00000640568 MROH5Q6ZUA9 1318 aa26.73■■□□□ 1.87
TSPAN9-208ENST00000640568 IL15P40933 162 aaPredicted RBP26.73■■□□□ 1.87
TSPAN9-208ENST00000640568 HSP90AB4PQ58FF6 505 aa26.73■■□□□ 1.87
TSPAN9-208ENST00000640568 RWDD1Q9H446 243 aaPredicted RBP26.73■■□□□ 1.87
TSPAN9-208ENST00000640568 ANKIB1Q9P2G1 1089 aa26.73■■□□□ 1.87
TSPAN9-208ENST00000640568 MINPP1Q9UNW1 487 aa26.73■■□□□ 1.87
TSPAN9-208ENST00000640568 GOLGB1Q14789 3259 aaKnown RBP26.72■■□□□ 1.87
TSPAN9-208ENST00000640568 CHRNDQ07001 517 aa26.72■■□□□ 1.87
TSPAN9-208ENST00000640568 METTL24Q5JXM2 366 aa26.72■■□□□ 1.87
TSPAN9-208ENST00000640568 ERICH6BQ5W0A0 696 aa26.72■■□□□ 1.87
TSPAN9-208ENST00000640568 ANKRD2Q9GZV1 360 aa26.72■■□□□ 1.87
TSPAN9-208ENST00000640568 EXOC6BQ9Y2D4 811 aa26.72■■□□□ 1.87
TSPAN9-208ENST00000640568 HDAC1Q13547 482 aaPredicted RBP26.71■■□□□ 1.87
TSPAN9-208ENST00000640568 GPR162Q16538 588 aa26.71■■□□□ 1.87
TSPAN9-208ENST00000640568 GRIPAP1Q4V328 841 aa26.71■■□□□ 1.87
TSPAN9-208ENST00000640568 OLFM4Q6UX06 510 aa26.71■■□□□ 1.87
TSPAN9-208ENST00000640568 C7orf43Q8WVR3 580 aa26.71■■□□□ 1.87
TSPAN9-208ENST00000640568 NSFL1CQ9UNZ2 370 aaKnown RBP26.71■■□□□ 1.87
TSPAN9-208ENST00000640568 RIPOR2Q9Y4F9 1068 aa26.71■■□□□ 1.87
TSPAN9-208ENST00000640568 MPNDQ8N594 471 aa26.7■■□□□ 1.87
TSPAN9-208ENST00000640568 NOP58Q9Y2X3 529 aaKnown RBP26.7■■□□□ 1.87
TSPAN9-208ENST00000640568 DPP8Q6V1X1 898 aaPredicted RBP26.69■■□□□ 1.86
TSPAN9-208ENST00000640568 RTKN2Q8IZC4 609 aa26.69■■□□□ 1.86
TSPAN9-208ENST00000640568 XDHP47989 1333 aa26.69■■□□□ 1.86
TSPAN9-208ENST00000640568 FER1L6Q2WGJ9 1857 aa26.69■■□□□ 1.86
TSPAN9-208ENST00000640568 KCNJ4P48050 445 aa26.68■■□□□ 1.86
TSPAN9-208ENST00000640568 GPSM2P81274 684 aa26.68■■□□□ 1.86
TSPAN9-208ENST00000640568 ATG9AQ7Z3C6 839 aa26.68■■□□□ 1.86
TSPAN9-208ENST00000640568 SLC51AQ86UW1 340 aa26.68■■□□□ 1.86
TSPAN9-208ENST00000640568 ERC1Q8IUD2 1116 aa26.68■■□□□ 1.86
TSPAN9-208ENST00000640568 CEP126Q9P2H0 1117 aa26.68■■□□□ 1.86
TSPAN9-208ENST00000640568 HELBQ8NG08 1087 aaPredicted RBP26.68■■□□□ 1.86
TSPAN9-208ENST00000640568 DCAF8L1A6NGE4 600 aa26.67■■□□□ 1.86
TSPAN9-208ENST00000640568 YBX3P16989 372 aaKnown RBP eCLIP26.67■■□□□ 1.86
TSPAN9-208ENST00000640568 DCTPP1Q9H773 170 aa26.67■■□□□ 1.86
TSPAN9-208ENST00000640568 GGA1Q9UJY5 639 aa26.67■■□□□ 1.86
TSPAN9-208ENST00000640568 LTBP1Q14766 1721 aa26.66■■□□□ 1.86
TSPAN9-208ENST00000640568 APBB1O00213 710 aa26.66■■□□□ 1.86
TSPAN9-208ENST00000640568 RAB11FIP3O75154 756 aa26.66■■□□□ 1.86
TSPAN9-208ENST00000640568 TAF5LO75529 589 aa26.66■■□□□ 1.86
TSPAN9-208ENST00000640568 PODXL2Q9NZ53 605 aa26.66■■□□□ 1.86
TSPAN9-208ENST00000640568 ATP2B4P23634 1241 aa26.65■■□□□ 1.86
TSPAN9-208ENST00000640568 C6orf229H3BNL8 230 aa26.64■■□□□ 1.86
TSPAN9-208ENST00000640568 UFL1O94874 794 aa26.64■■□□□ 1.86
TSPAN9-208ENST00000640568 PDE8BO95263 885 aa26.64■■□□□ 1.86
TSPAN9-208ENST00000640568 ARHGAP27Q6ZUM4 889 aa26.64■■□□□ 1.86
TSPAN9-208ENST00000640568 SUPT20HQ8NEM7 779 aa26.64■■□□□ 1.86
TSPAN9-208ENST00000640568 GCC1Q96CN9 775 aa26.64■■□□□ 1.86
TSPAN9-208ENST00000640568 LEMD3Q9Y2U8 911 aa26.64■■□□□ 1.86
TSPAN9-208ENST00000640568 TFCP2Q12800 502 aa26.63■■□□□ 1.85
TSPAN9-208ENST00000640568 KIF1BPQ96EK5 621 aa26.63■■□□□ 1.85
TSPAN9-208ENST00000640568 TAOK3Q9H2K8 898 aa26.63■■□□□ 1.85
TSPAN9-208ENST00000640568 GRIN3BO60391 1043 aa26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 SASH1O94885 1247 aa26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 FKBP4Q02790 459 aaKnown RBP eCLIP26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 CCDC136Q96JN2 1154 aa26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 ZBTB47Q9UFB7 747 aaPredicted RBP26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 CCDC88AQ3V6T2 1871 aa26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 SNED1Q8TER0 1413 aa26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 ZNF804BA4D1E1 1349 aa26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 IGHDP01880 384 aa26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 PUM3Q15397 648 aaKnown RBP26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 VGLL2Q8N8G2 317 aa26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 TBC1D16Q8TBP0 767 aa26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 RHPN1Q8TCX5 695 aa26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 PSMD1Q99460 953 aa26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 EYA3Q99504 573 aa26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 AKAP2Q9Y2D5 859 aa26.62■■□□□ 1.85
TSPAN9-208ENST00000640568 DUOX1Q9NRD9 1551 aa26.61■■□□□ 1.85
TSPAN9-208ENST00000640568 UBE4AQ14139 1066 aa26.61■■□□□ 1.85
TSPAN9-208ENST00000640568 LRRCC1Q9C099 1032 aa26.6■■□□□ 1.85
TSPAN9-208ENST00000640568 BCL11AQ9H165 835 aa26.6■■□□□ 1.85
TSPAN9-208ENST00000640568 PPP4R2Q9NY27 417 aa26.6■■□□□ 1.85
TSPAN9-208ENST00000640568 POLLQ9UGP5 575 aa26.6■■□□□ 1.85
TSPAN9-208ENST00000640568 ATP2B3Q16720 1220 aa26.59■■□□□ 1.85
TSPAN9-208ENST00000640568 RTFDC1Q9BY42 306 aaPredicted RBP26.59■■□□□ 1.85
TSPAN9-208ENST00000640568 NFKBIEO00221 500 aa26.58■■□□□ 1.85
TSPAN9-208ENST00000640568 IFIT1P09914 478 aaKnown RBP26.58■■□□□ 1.85
TSPAN9-208ENST00000640568 SLC5A1P13866 664 aa26.58■■□□□ 1.85
TSPAN9-208ENST00000640568 LPIN2Q92539 896 aa26.58■■□□□ 1.85
TSPAN9-208ENST00000640568 ARAP2Q8WZ64 1704 aa26.57■■□□□ 1.84
TSPAN9-208ENST00000640568 SNAP23O00161 211 aa26.57■■□□□ 1.84
TSPAN9-208ENST00000640568 RASSF7Q02833 373 aa26.57■■□□□ 1.84
TSPAN9-208ENST00000640568 WASHC4Q2M389 1173 aa26.57■■□□□ 1.84
TSPAN9-208ENST00000640568 CLASRPQ8N2M8 674 aaKnown RBP26.57■■□□□ 1.84
TSPAN9-208ENST00000640568 ZC3H12CQ9C0D7 883 aaKnown RBP26.57■■□□□ 1.84
TSPAN9-208ENST00000640568 IL1RAPL2Q9NP60 686 aa26.57■■□□□ 1.84
TSPAN9-208ENST00000640568 LTBP3Q9NS15 1303 aa26.57■■□□□ 1.84
TSPAN9-208ENST00000640568 ZNF609O15014 1411 aa26.57■■□□□ 1.84
TSPAN9-208ENST00000640568 GPR101Q96P66 508 aaPredicted RBP26.56■■□□□ 1.84
TSPAN9-208ENST00000640568 GPR108Q9NPR9 543 aa26.56■■□□□ 1.84
TSPAN9-208ENST00000640568 ZNF277Q9NRM2 450 aaPredicted RBP26.56■■□□□ 1.84
TSPAN9-208ENST00000640568 SBF1O95248 1867 aa26.56■■□□□ 1.84
TSPAN9-208ENST00000640568 MED23Q9ULK4 1368 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms