RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 TBC1D9BQ66K14 1250 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 DGLUCYQ7Z3D6 616 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 ARMC9Q7Z3E5 817 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 UBE2Q1Q7Z7E8 422 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 NME9Q86XW9 330 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 DIS3LQ8TF46 1054 aaKnown RBP2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 C7orf43Q8WVR3 580 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 ZKSCAN4Q969J2 545 aaPredicted RBP2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 NBPF4Q96M43 638 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 DEFB118Q96PH6 123 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 SLC4A9Q96Q91 983 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 SETDB2Q96T68 719 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 ZNF692Q9BU19 519 aaPredicted RBP2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 UNC93B1Q9H1C4 597 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 SH2B1Q9NRF2 756 aaPredicted RBP2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 PRKAG2Q9UGJ0 569 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 ZNRF3Q9ULT6 936 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 KDM2AQ9Y2K7 1162 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 BDP1A6H8Y1 2624 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 LRRC37A2A6NM11 1700 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 TAF1P21675 1872 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 SOS1Q07889 1333 aaPredicted RBP2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 UNC79Q9P2D8 2635 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 COL2A1P02458 1487 aaPredicted RBP2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 SOWAHBA6NEL2 793 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 FAM177BA6PVY3 158 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 PI4K2BG5E9Z4 385 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 FMNL1O95466 1100 aaPredicted RBP2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 CANXP27824 592 aaKnown RBP2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 HOXD10P28358 340 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 HOXC9P31274 260 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 SSTR3P32745 418 aaPredicted RBP2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 PRMT2P55345 433 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 CABP4P57796 275 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 SMAD3P84022 425 aaKnown RBP2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 CAP1Q01518 475 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 TFF2Q03403 129 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 GRIN2CQ14957 1233 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 ANGEL2Q5VTE6 544 aaKnown RBP2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 PRAMEF18Q5VWM3 479 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 SPRYD7Q5W111 196 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 CC2D2BQ6DHV5 1058 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 INTS5Q6P9B9 1019 aaKnown RBP2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 NBPF5PQ86XG9 351 aaPredicted RBP2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 IFNL2Q8IZJ0 200 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 SUPT20HQ8NEM7 779 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 RPGRQ92834 1020 aaKnown RBP2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 SLC10A4Q96EP9 437 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 ARHGAP39Q9C0H5 1083 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 NBPF3Q9H094 633 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 C11orf49Q9H6J7 331 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 ZFYVE28Q9HCC9 887 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 FAM86C1Q9NVL1 165 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 ANGEL1Q9UNK9 670 aaKnown RBP2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 SCAF8Q9UPN6 1271 aaKnown RBP2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 RIPOR2Q9Y4F9 1068 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 DDX60LQ5H9U9 1706 aaKnown RBP2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 ATRXP46100 2492 aa2.47□□□□□ -2.01
SYNGAP1-215ENST00000636443 ASTN2O75129 1339 aaPredicted RBP2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 MYPNQ86TC9 1320 aa2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 KMT2BQ9UMN6 2715 aaPredicted RBP2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 CHD8Q9HCK8 2581 aa2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 A0A087WZG4 1122 aa2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 EGFRP00533 1210 aa2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 GNRH1P01148 92 aa2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 BMP1P13497 986 aa2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 ALADP13716 330 aa2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 HOXB3P14651 431 aaPredicted RBP2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 PTPN12Q05209 780 aaKnown RBP2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 AKNAD1Q5T1N1 836 aa2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 DNAJC10Q8IXB1 793 aa2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 ATOH1Q92858 354 aaPredicted RBP2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 KHSRPQ92945 711 aaKnown RBP eCLIP2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 MFSD14AQ96MC6 490 aa2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 PRDM12Q9H4Q4 367 aa2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 BCL2L12Q9HB09 334 aa2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 CXXC1Q9P0U4 656 aaPredicted RBP2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 TONSLQ96HA7 1378 aa2.46□□□□□ -2.02
SYNGAP1-215ENST00000636443 CENPJQ9HC77 1338 aaPredicted RBP2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 G3V3G9 751 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 ZBTB48P10074 688 aaPredicted RBP2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 PHKG2P15735 406 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 DNAJB2P25686 324 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 PSMC4P43686 418 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 LACTBP83111 547 aaPredicted RBP2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 SCARF1Q14162 830 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 NKX1-1Q15270 411 aaPredicted RBP2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 SHHQ15465 462 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 GRIPAP1Q4V328 841 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 DCAF8Q5TAQ9 597 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 DPP8Q6V1X1 898 aaPredicted RBP2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 CCDC129Q6ZRS4 1044 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 PODNQ7Z5L7 613 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 LURAP1LQ8IV03 231 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 SLAIN1Q8ND83 568 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 TIFAQ96CG3 184 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 WNK4Q96J92 1243 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 RNPC3Q96LT9 517 aaKnown RBP2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 ZNF576Q9H609 170 aa2.45□□□□□ -2.02
SYNGAP1-215ENST00000636443 PRDM5Q9NQX1 630 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms