RNA–Protein interactions for RNA: ENST00000630887.2

SOX2-OT-258, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 748 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-258ENST00000630887 PPIP5K2O43314 1243 aa17.07■□□□□ 0.32
SOX2-OT-258ENST00000630887 UBTFL1P0CB47 393 aaPredicted RBP17.07■□□□□ 0.32
SOX2-OT-258ENST00000630887 RLBP1P12271 317 aa17.07■□□□□ 0.32
SOX2-OT-258ENST00000630887 CCDC57Q2TAC2 916 aa17.07■□□□□ 0.32
SOX2-OT-258ENST00000630887 LARGE2Q8N3Y3 721 aa17.07■□□□□ 0.32
SOX2-OT-258ENST00000630887 TBC1D16Q8TBP0 767 aa17.07■□□□□ 0.32
SOX2-OT-258ENST00000630887 GPBP1L1Q9HC44 474 aaPredicted RBP17.07■□□□□ 0.32
SOX2-OT-258ENST00000630887 ZNF541Q9H0D2 1346 aa17.06■□□□□ 0.32
SOX2-OT-258ENST00000630887 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
SOX2-OT-258ENST00000630887 FZD9O00144 591 aa17.06■□□□□ 0.32
SOX2-OT-258ENST00000630887 KIAA2012Q0VF49 1180 aa17.06■□□□□ 0.32
SOX2-OT-258ENST00000630887 ZNF594Q96JF6 807 aaPredicted RBP17.06■□□□□ 0.32
SOX2-OT-258ENST00000630887 GPR101Q96P66 508 aaPredicted RBP17.06■□□□□ 0.32
SOX2-OT-258ENST00000630887 MPHOSPH8Q99549 860 aa17.06■□□□□ 0.32
SOX2-OT-258ENST00000630887 VPS33BQ9H267 617 aa17.06■□□□□ 0.32
SOX2-OT-258ENST00000630887 ANKIB1Q9P2G1 1089 aa17.06■□□□□ 0.32
SOX2-OT-258ENST00000630887 XDHP47989 1333 aa17.05■□□□□ 0.32
SOX2-OT-258ENST00000630887 WTIPA6NIX2 430 aaPredicted RBP17.05■□□□□ 0.32
SOX2-OT-258ENST00000630887 C6orf229H3BNL8 230 aa17.05■□□□□ 0.32
SOX2-OT-258ENST00000630887 UFL1O94874 794 aa17.05■□□□□ 0.32
SOX2-OT-258ENST00000630887 DZIP1LQ8IYY4 767 aaKnown RBP17.05■□□□□ 0.32
SOX2-OT-258ENST00000630887 JDP2Q8WYK2 163 aa17.05■□□□□ 0.32
SOX2-OT-258ENST00000630887 NMRK2Q9NPI5 230 aa17.05■□□□□ 0.32
SOX2-OT-258ENST00000630887 GGA1Q9UJY5 639 aa17.05■□□□□ 0.32
SOX2-OT-258ENST00000630887 KDM2BQ8NHM5 1336 aa17.04■□□□□ 0.32
SOX2-OT-258ENST00000630887 WASHC4Q2M389 1173 aa17.04■□□□□ 0.32
SOX2-OT-258ENST00000630887 FTSJ3Q8IY81 847 aaKnown RBP17.04■□□□□ 0.32
SOX2-OT-258ENST00000630887 NIM1KQ8IY84 436 aa17.04■□□□□ 0.32
SOX2-OT-258ENST00000630887 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
SOX2-OT-258ENST00000630887 DDNO94850 711 aaPredicted RBP17.03■□□□□ 0.32
SOX2-OT-258ENST00000630887 GNAI3P08754 354 aa17.03■□□□□ 0.32
SOX2-OT-258ENST00000630887 CHRNDQ07001 517 aa17.03■□□□□ 0.32
SOX2-OT-258ENST00000630887 TAF7LQ5H9L4 462 aa17.03■□□□□ 0.32
SOX2-OT-258ENST00000630887 DPY19L2Q6NUT2 758 aa17.03■□□□□ 0.32
SOX2-OT-258ENST00000630887 DICER1Q9UPY3 1922 aaKnown RBP17.03■□□□□ 0.32
SOX2-OT-258ENST00000630887 CCDC88AQ3V6T2 1871 aa17.02■□□□□ 0.32
SOX2-OT-258ENST00000630887 KIF3CO14782 793 aa17.02■□□□□ 0.32
SOX2-OT-258ENST00000630887 RIMBP2O15034 1052 aa17.02■□□□□ 0.32
SOX2-OT-258ENST00000630887 PLIN1O60240 522 aa17.02■□□□□ 0.32
SOX2-OT-258ENST00000630887 ATP2B4P23634 1241 aa17.02■□□□□ 0.32
SOX2-OT-258ENST00000630887 LDHAL6AQ6ZMR3 332 aa17.02■□□□□ 0.32
SOX2-OT-258ENST00000630887 PANK1Q8TE04 598 aa17.02■□□□□ 0.32
SOX2-OT-258ENST00000630887 EYA3Q99504 573 aa17.02■□□□□ 0.32
SOX2-OT-258ENST00000630887 PUS3Q9BZE2 481 aaKnown RBP17.02■□□□□ 0.32
SOX2-OT-258ENST00000630887 SPEF2Q9C093 1822 aa17.02■□□□□ 0.31
SOX2-OT-258ENST00000630887 RFX5P48382 616 aaPredicted RBP17.01■□□□□ 0.31
SOX2-OT-258ENST00000630887 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
SOX2-OT-258ENST00000630887 KLHDC4Q8TBB5 520 aa17.01■□□□□ 0.31
SOX2-OT-258ENST00000630887 RRAGCQ9HB90 399 aa17.01■□□□□ 0.31
SOX2-OT-258ENST00000630887 ZNRF3Q9ULT6 936 aa17.01■□□□□ 0.31
SOX2-OT-258ENST00000630887 YDJCA8MPS7 323 aa17■□□□□ 0.31
SOX2-OT-258ENST00000630887 POTECB2RU33 542 aa17■□□□□ 0.31
SOX2-OT-258ENST00000630887 EIF6P56537 245 aaKnown RBP17■□□□□ 0.31
SOX2-OT-258ENST00000630887 HELBQ8NG08 1087 aaPredicted RBP17■□□□□ 0.31
SOX2-OT-258ENST00000630887 ANKRD2Q9GZV1 360 aa17■□□□□ 0.31
SOX2-OT-258ENST00000630887 DBNDD1Q9H9R9 158 aa17■□□□□ 0.31
SOX2-OT-258ENST00000630887 CNNM1Q9NRU3 951 aa17■□□□□ 0.31
SOX2-OT-258ENST00000630887 HDAC5Q9UQL6 1122 aa17■□□□□ 0.31
SOX2-OT-258ENST00000630887 SNAP23O00161 211 aa16.99■□□□□ 0.31
SOX2-OT-258ENST00000630887 TAF5LO75529 589 aa16.99■□□□□ 0.31
SOX2-OT-258ENST00000630887 DOK7Q18PE1 504 aa16.99■□□□□ 0.31
SOX2-OT-258ENST00000630887 LRRC24Q50LG9 513 aa16.99■□□□□ 0.31
SOX2-OT-258ENST00000630887 L3MBTL3Q96JM7 780 aaPredicted RBP16.99■□□□□ 0.31
SOX2-OT-258ENST00000630887 ZC3H12CQ9C0D7 883 aaKnown RBP16.99■□□□□ 0.31
SOX2-OT-258ENST00000630887 LEMD3Q9Y2U8 911 aa16.99■□□□□ 0.31
SOX2-OT-258ENST00000630887 RIPOR2Q9Y4F9 1068 aa16.99■□□□□ 0.31
SOX2-OT-258ENST00000630887 MED23Q9ULK4 1368 aa16.99■□□□□ 0.31
SOX2-OT-258ENST00000630887 ZNF804BA4D1E1 1349 aa16.98■□□□□ 0.31
SOX2-OT-258ENST00000630887 ECE2O60344 883 aa16.98■□□□□ 0.31
SOX2-OT-258ENST00000630887 GNAI2P04899 355 aa16.98■□□□□ 0.31
SOX2-OT-258ENST00000630887 KLRK1P26718 216 aa16.98■□□□□ 0.31
SOX2-OT-258ENST00000630887 PTPN12Q05209 780 aaKnown RBP16.98■□□□□ 0.31
SOX2-OT-258ENST00000630887 CXCL9Q07325 125 aa16.98■□□□□ 0.31
SOX2-OT-258ENST00000630887 TXNRD3Q86VQ6 643 aa16.98■□□□□ 0.31
SOX2-OT-258ENST00000630887 GPC2Q8N158 579 aa16.98■□□□□ 0.31
SOX2-OT-258ENST00000630887 WDR90Q96KV7 1748 aa16.98■□□□□ 0.31
SOX2-OT-258ENST00000630887 ZBTB7BO15156 539 aaPredicted RBP16.97■□□□□ 0.31
SOX2-OT-258ENST00000630887 RAD17O75943 681 aa16.97■□□□□ 0.31
SOX2-OT-258ENST00000630887 MTX1Q13505 466 aa16.97■□□□□ 0.31
SOX2-OT-258ENST00000630887 KCNQ5Q9NR82 932 aa16.97■□□□□ 0.31
SOX2-OT-258ENST00000630887 GJA3Q9Y6H8 435 aa16.97■□□□□ 0.31
SOX2-OT-258ENST00000630887 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.31
SOX2-OT-258ENST00000630887 MS4A1P11836 297 aa16.96■□□□□ 0.31
SOX2-OT-258ENST00000630887 VEGFAP15692 232 aaPredicted RBP16.96■□□□□ 0.31
SOX2-OT-258ENST00000630887 KCNJ4P48050 445 aa16.96■□□□□ 0.31
SOX2-OT-258ENST00000630887 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
SOX2-OT-258ENST00000630887 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
SOX2-OT-258ENST00000630887 CIAPIN1Q6FI81 312 aa16.95■□□□□ 0.3
SOX2-OT-258ENST00000630887 VGLL2Q8N8G2 317 aa16.95■□□□□ 0.3
SOX2-OT-258ENST00000630887 C1orf115Q9H7X2 142 aa16.95■□□□□ 0.3
SOX2-OT-258ENST00000630887 PA2G4Q9UQ80 394 aaKnown RBP16.95■□□□□ 0.3
SOX2-OT-258ENST00000630887 COG6Q9Y2V7 657 aa16.95■□□□□ 0.3
SOX2-OT-258ENST00000630887 MROH5Q6ZUA9 1318 aa16.95■□□□□ 0.3
SOX2-OT-258ENST00000630887 PNMA6EA0A0J9YXQ4 647 aa16.94■□□□□ 0.3
SOX2-OT-258ENST00000630887 EYA2O00167 538 aa16.94■□□□□ 0.3
SOX2-OT-258ENST00000630887 SCNN1DP51172 638 aa16.94■□□□□ 0.3
SOX2-OT-258ENST00000630887 MVPQ14764 893 aaKnown RBP16.94■□□□□ 0.3
SOX2-OT-258ENST00000630887 METTL24Q5JXM2 366 aa16.94■□□□□ 0.3
SOX2-OT-258ENST00000630887 C15orf52Q6ZUT6 534 aaKnown RBP16.94■□□□□ 0.3
SOX2-OT-258ENST00000630887 ATG9AQ7Z3C6 839 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms