RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 MPNDQ8N594 471 aa10.07□□□□□ -0.8
CHD2-213ENST00000628118 TMEM57Q8N5G2 664 aa10.07□□□□□ -0.8
CHD2-213ENST00000628118 CLUAP1Q96AJ1 413 aa10.07□□□□□ -0.8
CHD2-213ENST00000628118 MPHOSPH8Q99549 860 aa10.07□□□□□ -0.8
CHD2-213ENST00000628118 RTFDC1Q9BY42 306 aaPredicted RBP10.07□□□□□ -0.8
CHD2-213ENST00000628118 SEC31BQ9NQW1 1179 aa10.07□□□□□ -0.8
CHD2-213ENST00000628118 CREBZFQ9NS37 354 aa10.07□□□□□ -0.8
CHD2-213ENST00000628118 PODXL2Q9NZ53 605 aa10.07□□□□□ -0.8
CHD2-213ENST00000628118 LRRC37AA6NMS7 1700 aa10.07□□□□□ -0.8
CHD2-213ENST00000628118 SBF1O95248 1867 aa10.06□□□□□ -0.8
CHD2-213ENST00000628118 GNAI2P04899 355 aa10.06□□□□□ -0.8
CHD2-213ENST00000628118 TAF7LQ5H9L4 462 aa10.06□□□□□ -0.8
CHD2-213ENST00000628118 DPP8Q6V1X1 898 aaPredicted RBP10.06□□□□□ -0.8
CHD2-213ENST00000628118 KAZALD1Q96I82 304 aa10.06□□□□□ -0.8
CHD2-213ENST00000628118 BICC1Q9H694 974 aaKnown RBP10.06□□□□□ -0.8
CHD2-213ENST00000628118 DDX19BQ9UMR2 479 aa10.06□□□□□ -0.8
CHD2-213ENST00000628118 CHMP3Q9Y3E7 222 aa10.06□□□□□ -0.8
CHD2-213ENST00000628118 DICER1Q9UPY3 1922 aaKnown RBP10.05□□□□□ -0.8
CHD2-213ENST00000628118 ATP2B4P23634 1241 aa10.05□□□□□ -0.8
CHD2-213ENST00000628118 EPHA10Q5JZY3 1008 aa10.05□□□□□ -0.8
CHD2-213ENST00000628118 C9orf131Q5VYM1 1079 aa10.05□□□□□ -0.8
CHD2-213ENST00000628118 ITPRIPQ8IWB1 547 aa10.05□□□□□ -0.8
CHD2-213ENST00000628118 ANKRD44Q8N8A2 993 aa10.05□□□□□ -0.8
CHD2-213ENST00000628118 CCDC85AQ96PX6 553 aaPredicted RBP10.05□□□□□ -0.8
CHD2-213ENST00000628118 EYA3Q99504 573 aa10.05□□□□□ -0.8
CHD2-213ENST00000628118 MEIS3Q99687 375 aa10.05□□□□□ -0.8
CHD2-213ENST00000628118 ANKRD2Q9GZV1 360 aa10.05□□□□□ -0.8
CHD2-213ENST00000628118 XDHP47989 1333 aa10.05□□□□□ -0.8
CHD2-213ENST00000628118 TAF1P21675 1872 aa10.04□□□□□ -0.8
CHD2-213ENST00000628118 ZBTB7BO15156 539 aaPredicted RBP10.04□□□□□ -0.8
CHD2-213ENST00000628118 YY1P25490 414 aa10.04□□□□□ -0.8
CHD2-213ENST00000628118 IARSP41252 1262 aaKnown RBP10.04□□□□□ -0.8
CHD2-213ENST00000628118 VASPP50552 380 aaPredicted RBP10.04□□□□□ -0.8
CHD2-213ENST00000628118 RASSF7Q02833 373 aa10.04□□□□□ -0.8
CHD2-213ENST00000628118 MTX1Q13505 466 aa10.04□□□□□ -0.8
CHD2-213ENST00000628118 MVPQ14764 893 aaKnown RBP10.04□□□□□ -0.8
CHD2-213ENST00000628118 CHADLQ6NUI6 762 aa10.04□□□□□ -0.8
CHD2-213ENST00000628118 RNF181Q9P0P0 153 aa10.04□□□□□ -0.8
CHD2-213ENST00000628118 GGA1Q9UJY5 639 aa10.04□□□□□ -0.8
CHD2-213ENST00000628118 MINPP1Q9UNW1 487 aa10.04□□□□□ -0.8
CHD2-213ENST00000628118 NSFL1CQ9UNZ2 370 aaKnown RBP10.04□□□□□ -0.8
CHD2-213ENST00000628118 LEMD3Q9Y2U8 911 aa10.04□□□□□ -0.8
CHD2-213ENST00000628118 LRRFIP2Q9Y608 721 aaKnown RBP10.04□□□□□ -0.8
CHD2-213ENST00000628118 RLBP1P12271 317 aa10.03□□□□□ -0.8
CHD2-213ENST00000628118 CCDC88AQ3V6T2 1871 aa10.03□□□□□ -0.8
CHD2-213ENST00000628118 LDHAL6AQ6ZMR3 332 aa10.03□□□□□ -0.8
CHD2-213ENST00000628118 JDP2Q8WYK2 163 aa10.03□□□□□ -0.8
CHD2-213ENST00000628118 ANKIB1Q9P2G1 1089 aa10.03□□□□□ -0.8
CHD2-213ENST00000628118 TNNQ9UQP3 1299 aa10.03□□□□□ -0.8
CHD2-213ENST00000628118 MROH5Q6ZUA9 1318 aa10.03□□□□□ -0.8
CHD2-213ENST00000628118 GOLGB1Q14789 3259 aaKnown RBP10.02□□□□□ -0.8
CHD2-213ENST00000628118 CIAO1O76071 339 aa10.02□□□□□ -0.81
CHD2-213ENST00000628118 RRP1P56182 461 aaKnown RBP10.02□□□□□ -0.81
CHD2-213ENST00000628118 GPSM2P81274 684 aa10.02□□□□□ -0.81
CHD2-213ENST00000628118 KIAA2012Q0VF49 1180 aa10.02□□□□□ -0.81
CHD2-213ENST00000628118 DPY19L2Q6NUT2 758 aa10.02□□□□□ -0.81
CHD2-213ENST00000628118 OLFM4Q6UX06 510 aa10.02□□□□□ -0.81
CHD2-213ENST00000628118 LARGE2Q8N3Y3 721 aa10.02□□□□□ -0.81
CHD2-213ENST00000628118 TBC1D16Q8TBP0 767 aa10.02□□□□□ -0.81
CHD2-213ENST00000628118 PANK1Q8TE04 598 aa10.02□□□□□ -0.81
CHD2-213ENST00000628118 ZNF277Q9NRM2 450 aaPredicted RBP10.02□□□□□ -0.81
CHD2-213ENST00000628118 CNNM1Q9NRU3 951 aa10.02□□□□□ -0.81
CHD2-213ENST00000628118 UTRNP46939 3433 aa10.02□□□□□ -0.81
CHD2-213ENST00000628118 C6orf229H3BNL8 230 aa10.01□□□□□ -0.81
CHD2-213ENST00000628118 PPIP5K2O43314 1243 aa10.01□□□□□ -0.81
CHD2-213ENST00000628118 UFL1O94874 794 aa10.01□□□□□ -0.81
CHD2-213ENST00000628118 RFX5P48382 616 aaPredicted RBP10.01□□□□□ -0.81
CHD2-213ENST00000628118 CHRNDQ07001 517 aa10.01□□□□□ -0.81
CHD2-213ENST00000628118 WASHC4Q2M389 1173 aa10.01□□□□□ -0.81
CHD2-213ENST00000628118 NIM1KQ8IY84 436 aa10.01□□□□□ -0.81
CHD2-213ENST00000628118 ZC3H12CQ9C0D7 883 aaKnown RBP10.01□□□□□ -0.81
CHD2-213ENST00000628118 COPRSQ9NQ92 184 aa10.01□□□□□ -0.81
CHD2-213ENST00000628118 LTBP1Q14766 1721 aa10.01□□□□□ -0.81
CHD2-213ENST00000628118 KDM2BQ8NHM5 1336 aa10.01□□□□□ -0.81
CHD2-213ENST00000628118 MED23Q9ULK4 1368 aa10.01□□□□□ -0.81
CHD2-213ENST00000628118 FZD9O00144 591 aa10□□□□□ -0.81
CHD2-213ENST00000628118 EYA2O00167 538 aa10□□□□□ -0.81
CHD2-213ENST00000628118 SRGAP3O43295 1099 aa10□□□□□ -0.81
CHD2-213ENST00000628118 PLIN1O60240 522 aa10□□□□□ -0.81
CHD2-213ENST00000628118 KCNJ4P48050 445 aa10□□□□□ -0.81
CHD2-213ENST00000628118 PRELPP51888 382 aa10□□□□□ -0.81
CHD2-213ENST00000628118 EIF6P56537 245 aaKnown RBP10□□□□□ -0.81
CHD2-213ENST00000628118 ATP8B2P98198 1209 aa10□□□□□ -0.81
CHD2-213ENST00000628118 PTPN12Q05209 780 aaKnown RBP10□□□□□ -0.81
CHD2-213ENST00000628118 AAMPQ13685 434 aa10□□□□□ -0.81
CHD2-213ENST00000628118 UBE4AQ14139 1066 aa10□□□□□ -0.81
CHD2-213ENST00000628118 C15orf52Q6ZUT6 534 aaKnown RBP10□□□□□ -0.81
CHD2-213ENST00000628118 RPAP2Q8IXW5 612 aaPredicted RBP10□□□□□ -0.81
CHD2-213ENST00000628118 PLCD3Q8N3E9 789 aa10□□□□□ -0.81
CHD2-213ENST00000628118 POLLQ9UGP5 575 aa10□□□□□ -0.81
CHD2-213ENST00000628118 COG6Q9Y2V7 657 aa10□□□□□ -0.81
CHD2-213ENST00000628118 RIPOR2Q9Y4F9 1068 aa10□□□□□ -0.81
CHD2-213ENST00000628118 ZNF804BA4D1E1 1349 aa10□□□□□ -0.81
CHD2-213ENST00000628118 DUOX1Q9NRD9 1551 aa10□□□□□ -0.81
CHD2-213ENST00000628118 SPEF2Q9C093 1822 aa10□□□□□ -0.81
CHD2-213ENST00000628118 COL4A1P02462 1669 aa9.99□□□□□ -0.81
CHD2-213ENST00000628118 GLTPD2A6NH11 291 aa9.99□□□□□ -0.81
CHD2-213ENST00000628118 IL15P40933 162 aaPredicted RBP9.99□□□□□ -0.81
CHD2-213ENST00000628118 MNX1P50219 401 aaPredicted RBP9.99□□□□□ -0.81
CHD2-213ENST00000628118 AOC3Q16853 763 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms