RNA–Protein interactions for RNA: ENST00000626657.2

CCDC163-203, Transcript of coiled-coil domain containing 163, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC163, Length 1,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-203ENST00000626657 PTH1RQ03431 593 aa16.16■□□□□ 0.18
CCDC163-203ENST00000626657 CCDC152Q4G0S7 254 aa16.16■□□□□ 0.18
CCDC163-203ENST00000626657 TTC39AQ5SRH9 613 aa16.16■□□□□ 0.18
CCDC163-203ENST00000626657 VPS53Q5VIR6 699 aa16.16■□□□□ 0.18
CCDC163-203ENST00000626657 CNNM1Q9NRU3 951 aa16.16■□□□□ 0.18
CCDC163-203ENST00000626657 TRPC5Q9UL62 973 aaPredicted RBP16.16■□□□□ 0.18
CCDC163-203ENST00000626657 RBM8AQ9Y5S9 174 aaKnown RBP16.16■□□□□ 0.18
CCDC163-203ENST00000626657 SCN7AQ01118 1682 aa16.16■□□□□ 0.18
CCDC163-203ENST00000626657 GOLGA6L22H0YM25 854 aa16.15■□□□□ 0.18
CCDC163-203ENST00000626657 SSFA2P28290 1259 aa16.15■□□□□ 0.18
CCDC163-203ENST00000626657 ATP2B3Q16720 1220 aa16.15■□□□□ 0.18
CCDC163-203ENST00000626657 SUSD4Q5VX71 490 aa16.15■□□□□ 0.18
CCDC163-203ENST00000626657 USPL1Q5W0Q7 1092 aa16.15■□□□□ 0.18
CCDC163-203ENST00000626657 CREB3L3Q68CJ9 461 aa16.15■□□□□ 0.18
CCDC163-203ENST00000626657 PRPF40BQ6NWY9 871 aaKnown RBP16.15■□□□□ 0.18
CCDC163-203ENST00000626657 TNPO1Q92973 898 aaKnown RBP16.15■□□□□ 0.18
CCDC163-203ENST00000626657 XAGE2Q96GT9 111 aa16.15■□□□□ 0.18
CCDC163-203ENST00000626657 TTC14Q96N46 770 aa16.15■□□□□ 0.18
CCDC163-203ENST00000626657 ZSWIM6Q9HCJ5 1215 aa16.15■□□□□ 0.18
CCDC163-203ENST00000626657 NIP7Q9Y221 180 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCDC163-203ENST00000626657 CYP46A1Q9Y6A2 500 aa16.15■□□□□ 0.18
CCDC163-203ENST00000626657 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
CCDC163-203ENST00000626657 LINC00116Q8NCU8 138 aa16.14■□□□□ 0.18
CCDC163-203ENST00000626657 ZSCAN31Q96LW9 406 aaPredicted RBP16.14■□□□□ 0.18
CCDC163-203ENST00000626657 TAF5LO75529 589 aa16.14■□□□□ 0.17
CCDC163-203ENST00000626657 PDE8BO95263 885 aa16.14■□□□□ 0.17
CCDC163-203ENST00000626657 NTSR2O95665 410 aa16.14■□□□□ 0.17
CCDC163-203ENST00000626657 ANKRD1Q15327 319 aa16.14■□□□□ 0.17
CCDC163-203ENST00000626657 RASEFQ8IZ41 740 aa16.14■□□□□ 0.17
CCDC163-203ENST00000626657 VGLL2Q8N8G2 317 aa16.14■□□□□ 0.17
CCDC163-203ENST00000626657 ALDH8A1Q9H2A2 487 aaPredicted RBP16.14■□□□□ 0.17
CCDC163-203ENST00000626657 SH2B1Q9NRF2 756 aaPredicted RBP16.14■□□□□ 0.17
CCDC163-203ENST00000626657 DDX60Q8IY21 1712 aaKnown RBP16.14■□□□□ 0.17
CCDC163-203ENST00000626657 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
CCDC163-203ENST00000626657 RPAP1Q9BWH6 1393 aaPredicted RBP16.13■□□□□ 0.17
CCDC163-203ENST00000626657 LY75O60449 1722 aa16.13■□□□□ 0.17
CCDC163-203ENST00000626657 GOLIM4O00461 696 aa16.13■□□□□ 0.17
CCDC163-203ENST00000626657 SLC27A2O14975 620 aa16.13■□□□□ 0.17
CCDC163-203ENST00000626657 CYP2E1P05181 493 aaPredicted RBP16.13■□□□□ 0.17
CCDC163-203ENST00000626657 CASTP20810 708 aaKnown RBP16.13■□□□□ 0.17
CCDC163-203ENST00000626657 GSE1Q14687 1217 aa16.13■□□□□ 0.17
CCDC163-203ENST00000626657 TTF1Q15361 905 aaPredicted RBP16.13■□□□□ 0.17
CCDC163-203ENST00000626657 PUM3Q15397 648 aaKnown RBP16.13■□□□□ 0.17
CCDC163-203ENST00000626657 DDX46Q7L014 1031 aaKnown RBP16.13■□□□□ 0.17
CCDC163-203ENST00000626657 DSCC1Q9BVC3 393 aa16.13■□□□□ 0.17
CCDC163-203ENST00000626657 UPF3BQ9BZI7 483 aaKnown RBP16.13■□□□□ 0.17
CCDC163-203ENST00000626657 LIMCH1Q9UPQ0 1083 aa16.13■□□□□ 0.17
CCDC163-203ENST00000626657 AFF2P51816 1311 aa16.12■□□□□ 0.17
CCDC163-203ENST00000626657 RNF113AO15541 343 aaKnown RBP16.12■□□□□ 0.17
CCDC163-203ENST00000626657 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
CCDC163-203ENST00000626657 UQCRFS1P1P0C7P4 283 aa16.12■□□□□ 0.17
CCDC163-203ENST00000626657 PDIA4P13667 645 aaKnown RBP16.12■□□□□ 0.17
CCDC163-203ENST00000626657 DEKP35659 375 aaKnown RBP16.12■□□□□ 0.17
CCDC163-203ENST00000626657 SKOR2Q2VWA4 1001 aaPredicted RBP16.12■□□□□ 0.17
CCDC163-203ENST00000626657 ZMYM1Q5SVZ6 1142 aa16.12■□□□□ 0.17
CCDC163-203ENST00000626657 ZSCAN25Q6NSZ9 544 aa16.12■□□□□ 0.17
CCDC163-203ENST00000626657 RUFY3Q7L099 469 aa16.12■□□□□ 0.17
CCDC163-203ENST00000626657 SYNE4Q8N205 404 aa16.12■□□□□ 0.17
CCDC163-203ENST00000626657 LPIN2Q92539 896 aa16.12■□□□□ 0.17
CCDC163-203ENST00000626657 JAKMIP1Q96N16 626 aaKnown RBP16.12■□□□□ 0.17
CCDC163-203ENST00000626657 NYXQ9GZU5 481 aa16.12■□□□□ 0.17
CCDC163-203ENST00000626657 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
CCDC163-203ENST00000626657 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.12■□□□□ 0.17
CCDC163-203ENST00000626657 IGHMBP2P38935 993 aaKnown RBP16.11■□□□□ 0.17
CCDC163-203ENST00000626657 ZNF589Q86UQ0 364 aaPredicted RBP16.11■□□□□ 0.17
CCDC163-203ENST00000626657 EDC3Q96F86 508 aaKnown RBP16.11■□□□□ 0.17
CCDC163-203ENST00000626657 CCDC85AQ96PX6 553 aaPredicted RBP16.11■□□□□ 0.17
CCDC163-203ENST00000626657 MPHOSPH8Q99549 860 aa16.11■□□□□ 0.17
CCDC163-203ENST00000626657 PDRG1Q9NUG6 133 aa16.11■□□□□ 0.17
CCDC163-203ENST00000626657 SBF2Q86WG5 1849 aa16.1■□□□□ 0.17
CCDC163-203ENST00000626657 HSPA1LP34931 641 aa16.1■□□□□ 0.17
CCDC163-203ENST00000626657 CDC5LQ99459 802 aaKnown RBP16.1■□□□□ 0.17
CCDC163-203ENST00000626657 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.1■□□□□ 0.17
CCDC163-203ENST00000626657 NARFQ9UHQ1 456 aa16.1■□□□□ 0.17
CCDC163-203ENST00000626657 HMGB1P09429 215 aaKnown RBP16.09■□□□□ 0.17
CCDC163-203ENST00000626657 SLC5A1P13866 664 aa16.09■□□□□ 0.17
CCDC163-203ENST00000626657 AK2P54819 239 aa16.09■□□□□ 0.17
CCDC163-203ENST00000626657 BLOC1S2Q6QNY1 142 aa16.09■□□□□ 0.17
CCDC163-203ENST00000626657 CCNL1Q9UK58 526 aaPredicted RBP16.09■□□□□ 0.17
CCDC163-203ENST00000626657 COL24A1Q17RW2 1714 aa16.09■□□□□ 0.17
CCDC163-203ENST00000626657 FGFR2P21802 821 aa16.09■□□□□ 0.17
CCDC163-203ENST00000626657 ARID4AP29374 1257 aaPredicted RBP16.09■□□□□ 0.17
CCDC163-203ENST00000626657 ADORA1P30542 326 aa16.09■□□□□ 0.17
CCDC163-203ENST00000626657 SF3B3Q15393 1217 aaKnown RBP16.09■□□□□ 0.17
CCDC163-203ENST00000626657 ZGPATQ8N5A5 531 aaKnown RBP16.09■□□□□ 0.17
CCDC163-203ENST00000626657 RTCBQ9Y3I0 505 aaKnown RBP16.09■□□□□ 0.17
CCDC163-203ENST00000626657 MYH7P12883 1935 aa16.08■□□□□ 0.16
CCDC163-203ENST00000626657 TAF1LQ8IZX4 1826 aa16.08■□□□□ 0.16
CCDC163-203ENST00000626657 ZPR1O75312 459 aa16.08■□□□□ 0.16
CCDC163-203ENST00000626657 HCLS1P14317 486 aaPredicted RBP16.08■□□□□ 0.16
CCDC163-203ENST00000626657 FKBP4Q02790 459 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCDC163-203ENST00000626657 SLC10A5Q5PT55 438 aa16.08■□□□□ 0.16
CCDC163-203ENST00000626657 RPS6KB1P23443 525 aa16.07■□□□□ 0.16
CCDC163-203ENST00000626657 APPBP2Q92624 585 aa16.07■□□□□ 0.16
CCDC163-203ENST00000626657 BCL11BQ9C0K0 894 aaPredicted RBP16.07■□□□□ 0.16
CCDC163-203ENST00000626657 CTNNA3Q9UI47 895 aa16.07■□□□□ 0.16
CCDC163-203ENST00000626657 TRAK2O60296 914 aa16.06■□□□□ 0.16
CCDC163-203ENST00000626657 BAG4O95429 457 aaKnown RBP16.06■□□□□ 0.16
CCDC163-203ENST00000626657 ADRA2BP18089 450 aa16.06■□□□□ 0.16
CCDC163-203ENST00000626657 ADCK5Q3MIX3 580 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms