RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 KLHDC4Q8TBB5 520 aa17.94■□□□□ 0.46
CBWD3-217ENST00000621474 PODXL2Q9NZ53 605 aa17.94■□□□□ 0.46
CBWD3-217ENST00000621474 POLLQ9UGP5 575 aa17.94■□□□□ 0.46
CBWD3-217ENST00000621474 MTX1Q13505 466 aa17.94■□□□□ 0.46
CBWD3-217ENST00000621474 DPP8Q6V1X1 898 aaPredicted RBP17.94■□□□□ 0.46
CBWD3-217ENST00000621474 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.94■□□□□ 0.46
CBWD3-217ENST00000621474 RNF181Q9P0P0 153 aa17.94■□□□□ 0.46
CBWD3-217ENST00000621474 NSFL1CQ9UNZ2 370 aaKnown RBP17.94■□□□□ 0.46
CBWD3-217ENST00000621474 GNAI2P04899 355 aa17.93■□□□□ 0.46
CBWD3-217ENST00000621474 MPHOSPH8Q99549 860 aa17.93■□□□□ 0.46
CBWD3-217ENST00000621474 PUS3Q9BZE2 481 aaKnown RBP17.93■□□□□ 0.46
CBWD3-217ENST00000621474 C1orf115Q9H7X2 142 aa17.93■□□□□ 0.46
CBWD3-217ENST00000621474 IARSP41252 1262 aaKnown RBP17.92■□□□□ 0.46
CBWD3-217ENST00000621474 PTPN12Q05209 780 aaKnown RBP17.92■□□□□ 0.46
CBWD3-217ENST00000621474 CHRNDQ07001 517 aa17.91■□□□□ 0.46
CBWD3-217ENST00000621474 LDHAL6AQ6ZMR3 332 aa17.91■□□□□ 0.46
CBWD3-217ENST00000621474 TBC1D16Q8TBP0 767 aa17.91■□□□□ 0.46
CBWD3-217ENST00000621474 TMX4Q9H1E5 349 aaPredicted RBP17.91■□□□□ 0.46
CBWD3-217ENST00000621474 DDX19BQ9UMR2 479 aa17.91■□□□□ 0.46
CBWD3-217ENST00000621474 HDAC5Q9UQL6 1122 aa17.91■□□□□ 0.46
CBWD3-217ENST00000621474 XDHP47989 1333 aa17.91■□□□□ 0.46
CBWD3-217ENST00000621474 PNMA6EA0A0J9YXQ4 647 aa17.9■□□□□ 0.46
CBWD3-217ENST00000621474 YY1P25490 414 aa17.9■□□□□ 0.46
CBWD3-217ENST00000621474 AOC3Q16853 763 aa17.9■□□□□ 0.46
CBWD3-217ENST00000621474 LRRC24Q50LG9 513 aa17.9■□□□□ 0.46
CBWD3-217ENST00000621474 GPR101Q96P66 508 aaPredicted RBP17.9■□□□□ 0.46
CBWD3-217ENST00000621474 ZBTB40Q9NUA8 1239 aa17.9■□□□□ 0.46
CBWD3-217ENST00000621474 RIPOR2Q9Y4F9 1068 aa17.9■□□□□ 0.46
CBWD3-217ENST00000621474 ANKIB1Q9P2G1 1089 aa17.9■□□□□ 0.46
CBWD3-217ENST00000621474 KIAA2012Q0VF49 1180 aa17.89■□□□□ 0.45
CBWD3-217ENST00000621474 TAF7LQ5H9L4 462 aa17.89■□□□□ 0.45
CBWD3-217ENST00000621474 SCN9AQ15858 1988 aa17.89■□□□□ 0.45
CBWD3-217ENST00000621474 SNAP23O00161 211 aa17.88■□□□□ 0.45
CBWD3-217ENST00000621474 SRGAP3O43295 1099 aa17.88■□□□□ 0.45
CBWD3-217ENST00000621474 UFL1O94874 794 aa17.88■□□□□ 0.45
CBWD3-217ENST00000621474 SUPT20HQ8NEM7 779 aa17.88■□□□□ 0.45
CBWD3-217ENST00000621474 VPS33BQ9H267 617 aa17.88■□□□□ 0.45
CBWD3-217ENST00000621474 GGA1Q9UJY5 639 aa17.88■□□□□ 0.45
CBWD3-217ENST00000621474 PA2G4Q9UQ80 394 aaKnown RBP17.88■□□□□ 0.45
CBWD3-217ENST00000621474 ZC3H4Q9UPT8 1303 aaKnown RBP17.88■□□□□ 0.45
CBWD3-217ENST00000621474 IRS2Q9Y4H2 1338 aa17.88■□□□□ 0.45
CBWD3-217ENST00000621474 PPIP5K2O43314 1243 aa17.87■□□□□ 0.45
CBWD3-217ENST00000621474 TAF5LO75529 589 aa17.87■□□□□ 0.45
CBWD3-217ENST00000621474 ATG9AQ7Z3C6 839 aa17.87■□□□□ 0.45
CBWD3-217ENST00000621474 VGLL2Q8N8G2 317 aa17.87■□□□□ 0.45
CBWD3-217ENST00000621474 HELBQ8NG08 1087 aaPredicted RBP17.87■□□□□ 0.45
CBWD3-217ENST00000621474 COPRSQ9NQ92 184 aa17.87■□□□□ 0.45
CBWD3-217ENST00000621474 CNNM1Q9NRU3 951 aa17.87■□□□□ 0.45
CBWD3-217ENST00000621474 C6orf229H3BNL8 230 aa17.87■□□□□ 0.45
CBWD3-217ENST00000621474 FZD9O00144 591 aa17.87■□□□□ 0.45
CBWD3-217ENST00000621474 ATP2B4P23634 1241 aa17.87■□□□□ 0.45
CBWD3-217ENST00000621474 POLA2Q14181 598 aa17.87■□□□□ 0.45
CBWD3-217ENST00000621474 CEP85Q6P2H3 762 aa17.87■□□□□ 0.45
CBWD3-217ENST00000621474 ZNF646O15015 1829 aaPredicted RBP17.86■□□□□ 0.45
CBWD3-217ENST00000621474 EYA2O00167 538 aa17.86■□□□□ 0.45
CBWD3-217ENST00000621474 KLRK1P26718 216 aa17.86■□□□□ 0.45
CBWD3-217ENST00000621474 ATP8B2P98198 1209 aa17.86■□□□□ 0.45
CBWD3-217ENST00000621474 WASHC4Q2M389 1173 aa17.86■□□□□ 0.45
CBWD3-217ENST00000621474 TXNRD3Q86VQ6 643 aa17.86■□□□□ 0.45
CBWD3-217ENST00000621474 LARGE2Q8N3Y3 721 aa17.86■□□□□ 0.45
CBWD3-217ENST00000621474 ANKRD2Q9GZV1 360 aa17.86■□□□□ 0.45
CBWD3-217ENST00000621474 SUPT16HQ9Y5B9 1047 aaKnown RBP17.86■□□□□ 0.45
CBWD3-217ENST00000621474 PSME4Q14997 1843 aa17.85■□□□□ 0.45
CBWD3-217ENST00000621474 SSH3Q8TE77 659 aa17.85■□□□□ 0.45
CBWD3-217ENST00000621474 SIL1Q9H173 461 aa17.85■□□□□ 0.45
CBWD3-217ENST00000621474 LEMD3Q9Y2U8 911 aa17.85■□□□□ 0.45
CBWD3-217ENST00000621474 ZNF804BA4D1E1 1349 aa17.85■□□□□ 0.45
CBWD3-217ENST00000621474 ZNF541Q9H0D2 1346 aa17.85■□□□□ 0.45
CBWD3-217ENST00000621474 MED23Q9ULK4 1368 aa17.85■□□□□ 0.45
CBWD3-217ENST00000621474 YDJCA8MPS7 323 aa17.84■□□□□ 0.45
CBWD3-217ENST00000621474 RIMBP2O15034 1052 aa17.84■□□□□ 0.45
CBWD3-217ENST00000621474 MROH5Q6ZUA9 1318 aa17.84■□□□□ 0.45
CBWD3-217ENST00000621474 CIAO1O76071 339 aa17.83■□□□□ 0.45
CBWD3-217ENST00000621474 SIRT2Q8IXJ6 389 aa17.83■□□□□ 0.45
CBWD3-217ENST00000621474 ZNF784Q8NCA9 323 aaPredicted RBP17.83■□□□□ 0.45
CBWD3-217ENST00000621474 EYA3Q99504 573 aa17.83■□□□□ 0.45
CBWD3-217ENST00000621474 FBXO3Q9UK99 471 aa17.83■□□□□ 0.45
CBWD3-217ENST00000621474 JDP2Q8WYK2 163 aa17.83■□□□□ 0.44
CBWD3-217ENST00000621474 DBNDD1Q9H9R9 158 aa17.83■□□□□ 0.44
CBWD3-217ENST00000621474 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.83■□□□□ 0.44
CBWD3-217ENST00000621474 WDR90Q96KV7 1748 aa17.82■□□□□ 0.44
CBWD3-217ENST00000621474 PDE8BO95263 885 aa17.82■□□□□ 0.44
CBWD3-217ENST00000621474 NIM1KQ8IY84 436 aa17.82■□□□□ 0.44
CBWD3-217ENST00000621474 CRBNQ96SW2 442 aa17.82■□□□□ 0.44
CBWD3-217ENST00000621474 GLTPD2A6NH11 291 aa17.81■□□□□ 0.44
CBWD3-217ENST00000621474 DOK7Q18PE1 504 aa17.81■□□□□ 0.44
CBWD3-217ENST00000621474 METTL24Q5JXM2 366 aa17.81■□□□□ 0.44
CBWD3-217ENST00000621474 ZC3H12CQ9C0D7 883 aaKnown RBP17.81■□□□□ 0.44
CBWD3-217ENST00000621474 ZNRF3Q9ULT6 936 aa17.81■□□□□ 0.44
CBWD3-217ENST00000621474 ARAP2Q8WZ64 1704 aa17.8■□□□□ 0.44
CBWD3-217ENST00000621474 ECE2O60344 883 aa17.8■□□□□ 0.44
CBWD3-217ENST00000621474 FGFR2P21802 821 aa17.8■□□□□ 0.44
CBWD3-217ENST00000621474 C15orf52Q6ZUT6 534 aaKnown RBP17.8■□□□□ 0.44
CBWD3-217ENST00000621474 KCNQ5Q9NR82 932 aa17.8■□□□□ 0.44
CBWD3-217ENST00000621474 DDNO94850 711 aaPredicted RBP17.8■□□□□ 0.44
CBWD3-217ENST00000621474 IL15P40933 162 aaPredicted RBP17.8■□□□□ 0.44
CBWD3-217ENST00000621474 UBE4AQ14139 1066 aa17.8■□□□□ 0.44
CBWD3-217ENST00000621474 ZNF526Q8TF50 670 aaPredicted RBP17.8■□□□□ 0.44
CBWD3-217ENST00000621474 CHMP4BQ9H444 224 aaKnown RBP17.8■□□□□ 0.44
CBWD3-217ENST00000621474 KCNJ4P48050 445 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms