RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 MINPP1Q9UNW1 487 aa17■□□□□ 0.31
NEK3-210ENST00000620675 ATP6V0A2Q9Y487 856 aa17■□□□□ 0.31
NEK3-210ENST00000620675 ATG9AQ7Z3C6 839 aa16.99■□□□□ 0.31
NEK3-210ENST00000620675 MPHOSPH8Q99549 860 aa16.99■□□□□ 0.31
NEK3-210ENST00000620675 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
NEK3-210ENST00000620675 BSDC1Q9NW68 430 aaPredicted RBP16.99■□□□□ 0.31
NEK3-210ENST00000620675 TAF5LO75529 589 aa16.98■□□□□ 0.31
NEK3-210ENST00000620675 COPRSQ9NQ92 184 aa16.98■□□□□ 0.31
NEK3-210ENST00000620675 RIPOR2Q9Y4F9 1068 aa16.98■□□□□ 0.31
NEK3-210ENST00000620675 GPSM2P81274 684 aa16.98■□□□□ 0.31
NEK3-210ENST00000620675 RPAP2Q8IXW5 612 aaPredicted RBP16.98■□□□□ 0.31
NEK3-210ENST00000620675 SP8Q8IXZ3 490 aa16.98■□□□□ 0.31
NEK3-210ENST00000620675 GPR101Q96P66 508 aaPredicted RBP16.98■□□□□ 0.31
NEK3-210ENST00000620675 CNNM1Q9NRU3 951 aa16.98■□□□□ 0.31
NEK3-210ENST00000620675 EXOC6BQ9Y2D4 811 aa16.98■□□□□ 0.31
NEK3-210ENST00000620675 EYA2O00167 538 aa16.97■□□□□ 0.31
NEK3-210ENST00000620675 PRELPP51888 382 aa16.97■□□□□ 0.31
NEK3-210ENST00000620675 CHRNDQ07001 517 aa16.97■□□□□ 0.31
NEK3-210ENST00000620675 GPR162Q16538 588 aa16.97■□□□□ 0.31
NEK3-210ENST00000620675 NFKBIEO00221 500 aa16.96■□□□□ 0.31
NEK3-210ENST00000620675 RASSF7Q02833 373 aa16.96■□□□□ 0.31
NEK3-210ENST00000620675 NSFL1CQ9UNZ2 370 aaKnown RBP16.96■□□□□ 0.31
NEK3-210ENST00000620675 CHD4Q14839 1912 aa16.96■□□□□ 0.31
NEK3-210ENST00000620675 SURF6O75683 361 aaKnown RBP16.95■□□□□ 0.3
NEK3-210ENST00000620675 IGHDP01880 384 aa16.95■□□□□ 0.3
NEK3-210ENST00000620675 APBB1O00213 710 aa16.95■□□□□ 0.3
NEK3-210ENST00000620675 POLLQ9UGP5 575 aa16.95■□□□□ 0.3
NEK3-210ENST00000620675 SASH1O94885 1247 aa16.94■□□□□ 0.3
NEK3-210ENST00000620675 KLRK1P26718 216 aa16.94■□□□□ 0.3
NEK3-210ENST00000620675 CCDC93Q567U6 631 aa16.94■□□□□ 0.3
NEK3-210ENST00000620675 VGLL2Q8N8G2 317 aa16.94■□□□□ 0.3
NEK3-210ENST00000620675 COL4A5P29400 1685 aa16.94■□□□□ 0.3
NEK3-210ENST00000620675 ARHGAP27Q6ZUM4 889 aa16.93■□□□□ 0.3
NEK3-210ENST00000620675 ANKIB1Q9P2G1 1089 aa16.93■□□□□ 0.3
NEK3-210ENST00000620675 DICER1Q9UPY3 1922 aaKnown RBP16.93■□□□□ 0.3
NEK3-210ENST00000620675 NEFLP07196 543 aa16.93■□□□□ 0.3
NEK3-210ENST00000620675 METTL24Q5JXM2 366 aa16.93■□□□□ 0.3
NEK3-210ENST00000620675 MPNDQ8N594 471 aa16.93■□□□□ 0.3
NEK3-210ENST00000620675 NOP58Q9Y2X3 529 aaKnown RBP16.93■□□□□ 0.3
NEK3-210ENST00000620675 TFCP2Q12800 502 aa16.92■□□□□ 0.3
NEK3-210ENST00000620675 DPP8Q6V1X1 898 aaPredicted RBP16.92■□□□□ 0.3
NEK3-210ENST00000620675 TMC4Q7Z404 712 aa16.92■□□□□ 0.3
NEK3-210ENST00000620675 ZNF277Q9NRM2 450 aaPredicted RBP16.92■□□□□ 0.3
NEK3-210ENST00000620675 CIAO1O76071 339 aa16.92■□□□□ 0.3
NEK3-210ENST00000620675 TXNRD3Q86VQ6 643 aa16.92■□□□□ 0.3
NEK3-210ENST00000620675 TBC1D16Q8TBP0 767 aa16.92■□□□□ 0.3
NEK3-210ENST00000620675 BCL11AQ9H165 835 aa16.92■□□□□ 0.3
NEK3-210ENST00000620675 XDHP47989 1333 aa16.91■□□□□ 0.3
NEK3-210ENST00000620675 SCN9AQ15858 1988 aa16.91■□□□□ 0.3
NEK3-210ENST00000620675 HMMRO75330 724 aa16.91■□□□□ 0.3
NEK3-210ENST00000620675 UFL1O94874 794 aa16.91■□□□□ 0.3
NEK3-210ENST00000620675 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
NEK3-210ENST00000620675 G3BP1Q13283 466 aaKnown RBP eCLIP16.91■□□□□ 0.3
NEK3-210ENST00000620675 PODXL2Q9NZ53 605 aa16.91■□□□□ 0.3
NEK3-210ENST00000620675 AAMPQ13685 434 aa16.9■□□□□ 0.3
NEK3-210ENST00000620675 DCTPP1Q9H773 170 aa16.9■□□□□ 0.3
NEK3-210ENST00000620675 MROH5Q6ZUA9 1318 aa16.9■□□□□ 0.3
NEK3-210ENST00000620675 C6orf229H3BNL8 230 aa16.9■□□□□ 0.3
NEK3-210ENST00000620675 PDE8BO95263 885 aa16.9■□□□□ 0.3
NEK3-210ENST00000620675 OS9Q13438 667 aaPredicted RBP16.9■□□□□ 0.3
NEK3-210ENST00000620675 HDAC1Q13547 482 aaPredicted RBP16.9■□□□□ 0.3
NEK3-210ENST00000620675 RIMBP2O15034 1052 aa16.89■□□□□ 0.29
NEK3-210ENST00000620675 SMARCA5O60264 1052 aaPredicted RBP16.89■□□□□ 0.29
NEK3-210ENST00000620675 FKBP4Q02790 459 aaKnown RBP eCLIP16.89■□□□□ 0.29
NEK3-210ENST00000620675 CC2D2BQ6DHV5 1058 aa16.89■□□□□ 0.29
NEK3-210ENST00000620675 RTKN2Q8IZC4 609 aa16.89■□□□□ 0.29
NEK3-210ENST00000620675 RTFDC1Q9BY42 306 aaPredicted RBP16.89■□□□□ 0.29
NEK3-210ENST00000620675 TAOK3Q9H2K8 898 aa16.89■□□□□ 0.29
NEK3-210ENST00000620675 IL1RAPL2Q9NP60 686 aa16.89■□□□□ 0.29
NEK3-210ENST00000620675 GGA1Q9UJY5 639 aa16.89■□□□□ 0.29
NEK3-210ENST00000620675 ARAP2Q8WZ64 1704 aa16.89■□□□□ 0.29
NEK3-210ENST00000620675 ZNF804BA4D1E1 1349 aa16.89■□□□□ 0.29
NEK3-210ENST00000620675 IRS2Q9Y4H2 1338 aa16.89■□□□□ 0.29
NEK3-210ENST00000620675 ANKRD2Q9GZV1 360 aa16.89■□□□□ 0.29
NEK3-210ENST00000620675 FBXO3Q9UK99 471 aa16.89■□□□□ 0.29
NEK3-210ENST00000620675 TIMM10P62072 90 aa16.88■□□□□ 0.29
NEK3-210ENST00000620675 AOC3Q16853 763 aa16.88■□□□□ 0.29
NEK3-210ENST00000620675 SOGA3Q5TF21 947 aa16.88■□□□□ 0.29
NEK3-210ENST00000620675 PSMD1Q99460 953 aa16.88■□□□□ 0.29
NEK3-210ENST00000620675 TMX4Q9H1E5 349 aaPredicted RBP16.88■□□□□ 0.29
NEK3-210ENST00000620675 CEP126Q9P2H0 1117 aa16.88■□□□□ 0.29
NEK3-210ENST00000620675 FGFR2P21802 821 aa16.87■□□□□ 0.29
NEK3-210ENST00000620675 ADORA1P30542 326 aa16.87■□□□□ 0.29
NEK3-210ENST00000620675 RHPN1Q8TCX5 695 aa16.87■□□□□ 0.29
NEK3-210ENST00000620675 MYH13Q9UKX3 1938 aa16.87■□□□□ 0.29
NEK3-210ENST00000620675 TIAM2Q8IVF5 1701 aa16.87■□□□□ 0.29
NEK3-210ENST00000620675 ZNF609O15014 1411 aa16.86■□□□□ 0.29
NEK3-210ENST00000620675 ATP2B4P23634 1241 aa16.86■□□□□ 0.29
NEK3-210ENST00000620675 LEMD3Q9Y2U8 911 aa16.86■□□□□ 0.29
NEK3-210ENST00000620675 KCNJ4P48050 445 aa16.85■□□□□ 0.29
NEK3-210ENST00000620675 ATP2B3Q16720 1220 aa16.85■□□□□ 0.29
NEK3-210ENST00000620675 EAF2Q96CJ1 260 aaPredicted RBP16.85■□□□□ 0.29
NEK3-210ENST00000620675 TLR7Q9NYK1 1049 aaKnown RBP16.85■□□□□ 0.29
NEK3-210ENST00000620675 LTBP3Q9NS15 1303 aa16.85■□□□□ 0.29
NEK3-210ENST00000620675 ZNF646O15015 1829 aaPredicted RBP16.85■□□□□ 0.29
NEK3-210ENST00000620675 PPIP5K2O43314 1243 aa16.85■□□□□ 0.29
NEK3-210ENST00000620675 GRIN3BO60391 1043 aa16.85■□□□□ 0.29
NEK3-210ENST00000620675 GYG1P46976 350 aa16.85■□□□□ 0.29
NEK3-210ENST00000620675 PUM3Q15397 648 aaKnown RBP16.85■□□□□ 0.29
NEK3-210ENST00000620675 DOK7Q18PE1 504 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms