RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 AACSQ86V21 672 aa16.08■□□□□ 0.16
CNTNAP3B-215ENST00000619138 CCDC34Q96HJ3 373 aa16.08■□□□□ 0.16
CNTNAP3B-215ENST00000619138 CRB1P82279 1406 aa16.08■□□□□ 0.16
CNTNAP3B-215ENST00000619138 PRAMEF22A3QJZ6 481 aa16.08■□□□□ 0.16
CNTNAP3B-215ENST00000619138 SF3A1Q15459 793 aaKnown RBP16.08■□□□□ 0.16
CNTNAP3B-215ENST00000619138 PAXIP1Q6ZW49 1069 aaPredicted RBP16.08■□□□□ 0.16
CNTNAP3B-215ENST00000619138 HYPKQ9NX55 129 aa16.08■□□□□ 0.16
CNTNAP3B-215ENST00000619138 CCDC73Q6ZRK6 1079 aa16.07■□□□□ 0.16
CNTNAP3B-215ENST00000619138 AOPEPQ8N6M6 819 aa16.07■□□□□ 0.16
CNTNAP3B-215ENST00000619138 URI1O94763 535 aaPredicted RBP16.07■□□□□ 0.16
CNTNAP3B-215ENST00000619138 ARHGAP29Q52LW3 1261 aa16.07■□□□□ 0.16
CNTNAP3B-215ENST00000619138 TAF3Q5VWG9 929 aa16.07■□□□□ 0.16
CNTNAP3B-215ENST00000619138 EPC1Q9H2F5 836 aa16.07■□□□□ 0.16
CNTNAP3B-215ENST00000619138 OSBPL3Q9H4L5 887 aa16.07■□□□□ 0.16
CNTNAP3B-215ENST00000619138 CHPF2Q9P2E5 772 aa16.07■□□□□ 0.16
CNTNAP3B-215ENST00000619138 NBPF7P0C2Y1 421 aaPredicted RBP16.07■□□□□ 0.16
CNTNAP3B-215ENST00000619138 GABPB1Q06547 395 aaPredicted RBP16.07■□□□□ 0.16
CNTNAP3B-215ENST00000619138 C11orf57Q6ZUT1 292 aaPredicted RBP16.07■□□□□ 0.16
CNTNAP3B-215ENST00000619138 TMC6Q7Z403 805 aa16.07■□□□□ 0.16
CNTNAP3B-215ENST00000619138 CTIFO43310 598 aaKnown RBP16.06■□□□□ 0.16
CNTNAP3B-215ENST00000619138 IL2RBP14784 551 aa16.06■□□□□ 0.16
CNTNAP3B-215ENST00000619138 KINO60870 393 aaKnown RBP16.06■□□□□ 0.16
CNTNAP3B-215ENST00000619138 PHKG2P15735 406 aa16.06■□□□□ 0.16
CNTNAP3B-215ENST00000619138 SNW1Q13573 536 aaKnown RBP16.06■□□□□ 0.16
CNTNAP3B-215ENST00000619138 DHX37Q8IY37 1157 aaKnown RBP16.06■□□□□ 0.16
CNTNAP3B-215ENST00000619138 FUCA2Q9BTY2 467 aa16.06■□□□□ 0.16
CNTNAP3B-215ENST00000619138 CCT2P78371 535 aaKnown RBP16.06■□□□□ 0.16
CNTNAP3B-215ENST00000619138 LSG1Q9H089 658 aaKnown RBP16.06■□□□□ 0.16
CNTNAP3B-215ENST00000619138 MED1Q15648 1581 aaPredicted RBP16.06■□□□□ 0.16
CNTNAP3B-215ENST00000619138 PXDNQ92626 1479 aa16.05■□□□□ 0.16
CNTNAP3B-215ENST00000619138 SOS1Q07889 1333 aaPredicted RBP16.05■□□□□ 0.16
CNTNAP3B-215ENST00000619138 WDR17Q8IZU2 1322 aa16.05■□□□□ 0.16
CNTNAP3B-215ENST00000619138 SLU7O95391 586 aaKnown RBP16.05■□□□□ 0.16
CNTNAP3B-215ENST00000619138 RAB11FIP4Q86YS3 637 aa16.05■□□□□ 0.16
CNTNAP3B-215ENST00000619138 DNAI1Q9UI46 699 aa16.05■□□□□ 0.16
CNTNAP3B-215ENST00000619138 CYP27B1O15528 508 aa16.05■□□□□ 0.16
CNTNAP3B-215ENST00000619138 CREBRFQ8IUR6 639 aa16.05■□□□□ 0.16
CNTNAP3B-215ENST00000619138 LEO1Q8WVC0 666 aaPredicted RBP16.05■□□□□ 0.16
CNTNAP3B-215ENST00000619138 BRF1Q92994 677 aa16.05■□□□□ 0.16
CNTNAP3B-215ENST00000619138 EDC3Q96F86 508 aaKnown RBP16.05■□□□□ 0.16
CNTNAP3B-215ENST00000619138 EIF4A1P60842 406 aaKnown RBP16.05■□□□□ 0.16
CNTNAP3B-215ENST00000619138 KIF1BPQ96EK5 621 aa16.05■□□□□ 0.16
CNTNAP3B-215ENST00000619138 GYS2P54840 703 aa16.04■□□□□ 0.16
CNTNAP3B-215ENST00000619138 LRRC8AQ8IWT6 810 aa16.04■□□□□ 0.16
CNTNAP3B-215ENST00000619138 UBXN4Q92575 508 aa16.04■□□□□ 0.16
CNTNAP3B-215ENST00000619138 SCAND2PQ9GZW5 306 aaPredicted RBP16.04■□□□□ 0.16
CNTNAP3B-215ENST00000619138 USP44Q9H0E7 712 aa16.04■□□□□ 0.16
CNTNAP3B-215ENST00000619138 ZCCHC17Q9NP64 241 aaKnown RBP16.04■□□□□ 0.16
CNTNAP3B-215ENST00000619138 SEC31AO94979 1220 aaKnown RBP16.04■□□□□ 0.16
CNTNAP3B-215ENST00000619138 PDCP20941 246 aa16.04■□□□□ 0.16
CNTNAP3B-215ENST00000619138 CCAR1Q8IX12 1150 aaKnown RBP16.04■□□□□ 0.16
CNTNAP3B-215ENST00000619138 LRRN4CLQ8ND94 238 aa16.04■□□□□ 0.16
CNTNAP3B-215ENST00000619138 CALCOCO1Q9P1Z2 691 aa16.04■□□□□ 0.16
CNTNAP3B-215ENST00000619138 NRDCO43847 1150 aa16.04■□□□□ 0.16
CNTNAP3B-215ENST00000619138 C10orf67Q8IYJ2 551 aa16.04■□□□□ 0.16
CNTNAP3B-215ENST00000619138 ZSCAN31Q96LW9 406 aaPredicted RBP16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 DDX19AQ9NUU7 478 aaKnown RBP16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 TAF6LQ9Y6J9 622 aa16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 GOLGA8FQ08AF8 430 aa16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 GOLGA8DPQ0D2H9 430 aa16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 TMEM87AQ8NBN3 555 aa16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 C8orf37Q96NL8 207 aa16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 PI4KAP2A4QPH2 592 aa16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 HNRNPH2P55795 449 aaKnown RBP16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 CREB3L3Q68CJ9 461 aa16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 PDILTQ8N807 584 aa16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 PI4KAP1Q8N8J0 262 aa16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 TTC14Q96N46 770 aa16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 RGPD2P0DJD1 1756 aa16.03■□□□□ 0.16
CNTNAP3B-215ENST00000619138 TEX35Q5T0J7 233 aa16.02■□□□□ 0.16
CNTNAP3B-215ENST00000619138 NGLY1Q96IV0 654 aa16.02■□□□□ 0.16
CNTNAP3B-215ENST00000619138 DNAJC2Q99543 621 aaKnown RBP16.02■□□□□ 0.16
CNTNAP3B-215ENST00000619138 TMCO3Q6UWJ1 677 aa16.02■□□□□ 0.16
CNTNAP3B-215ENST00000619138 SH2B1Q9NRF2 756 aaPredicted RBP16.02■□□□□ 0.16
CNTNAP3B-215ENST00000619138 NMIQ13287 307 aaPredicted RBP16.02■□□□□ 0.15
CNTNAP3B-215ENST00000619138 TTLL5Q6EMB2 1281 aa16.02■□□□□ 0.15
CNTNAP3B-215ENST00000619138 SLC52A2Q9HAB3 445 aa16.02■□□□□ 0.15
CNTNAP3B-215ENST00000619138 SLIT3O75094 1523 aa16.02■□□□□ 0.15
CNTNAP3B-215ENST00000619138 CHST3Q7LGC8 479 aa16.01■□□□□ 0.15
CNTNAP3B-215ENST00000619138 IBSPP21815 317 aaPredicted RBP16.01■□□□□ 0.15
CNTNAP3B-215ENST00000619138 ZNF790Q6PG37 636 aa16.01■□□□□ 0.15
CNTNAP3B-215ENST00000619138 FSIP1Q8NA03 581 aa16.01■□□□□ 0.15
CNTNAP3B-215ENST00000619138 KLHDC4Q8TBB5 520 aa16.01■□□□□ 0.15
CNTNAP3B-215ENST00000619138 DCAF5Q96JK2 942 aa16.01■□□□□ 0.15
CNTNAP3B-215ENST00000619138 CLSTN2Q9H4D0 955 aa16.01■□□□□ 0.15
CNTNAP3B-215ENST00000619138 GLRX3O76003 335 aaKnown RBP16.01■□□□□ 0.15
CNTNAP3B-215ENST00000619138 LMOD1P29536 600 aaPredicted RBP16■□□□□ 0.15
CNTNAP3B-215ENST00000619138 BMS1Q14692 1282 aaKnown RBP16■□□□□ 0.15
CNTNAP3B-215ENST00000619138 ZNF496Q96IT1 587 aaPredicted RBP16■□□□□ 0.15
CNTNAP3B-215ENST00000619138 PGBD1Q96JS3 809 aa16■□□□□ 0.15
CNTNAP3B-215ENST00000619138 MEGF6O75095 1541 aa16■□□□□ 0.15
CNTNAP3B-215ENST00000619138 SFPQP23246 707 aaKnown RBP eCLIP16■□□□□ 0.15
CNTNAP3B-215ENST00000619138 RBM6P78332 1123 aaKnown RBP16■□□□□ 0.15
CNTNAP3B-215ENST00000619138 MEX3CQ5U5Q3 659 aaKnown RBP16■□□□□ 0.15
CNTNAP3B-215ENST00000619138 IFNKQ9P0W0 207 aa16■□□□□ 0.15
CNTNAP3B-215ENST00000619138 MARF1Q9Y4F3 1742 aaKnown RBP15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 RGPD5Q99666 1765 aa15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 PSMA5P28066 241 aa15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 VPS53Q5VIR6 699 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms