RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 EIF6P56537 245 aaKnown RBP20.33■□□□□ 0.85
BRCA1-228ENST00000618469 MLLT1Q03111 559 aaPredicted RBP20.33■□□□□ 0.85
BRCA1-228ENST00000618469 TMC4Q7Z404 712 aa20.33■□□□□ 0.85
BRCA1-228ENST00000618469 BCL2L13Q9BXK5 485 aa20.33■□□□□ 0.85
BRCA1-228ENST00000618469 CASP8AP2Q9UKL3 1982 aa20.33■□□□□ 0.84
BRCA1-228ENST00000618469 LMOD1P29536 600 aaPredicted RBP20.32■□□□□ 0.84
BRCA1-228ENST00000618469 SCNN1DP51172 638 aa20.32■□□□□ 0.84
BRCA1-228ENST00000618469 CTSWP56202 376 aa20.32■□□□□ 0.84
BRCA1-228ENST00000618469 HNRNPUQ00839 825 aaKnown RBP eCLIP20.32■□□□□ 0.84
BRCA1-228ENST00000618469 CST9Q5W186 159 aa20.32■□□□□ 0.84
BRCA1-228ENST00000618469 DPP8Q6V1X1 898 aaPredicted RBP20.32■□□□□ 0.84
BRCA1-228ENST00000618469 SP8Q8IXZ3 490 aa20.32■□□□□ 0.84
BRCA1-228ENST00000618469 TRMT2AQ8IZ69 625 aaKnown RBP20.32■□□□□ 0.84
BRCA1-228ENST00000618469 MRPL50Q8N5N7 158 aaKnown RBP20.32■□□□□ 0.84
BRCA1-228ENST00000618469 BEGAINQ9BUH8 593 aa20.32■□□□□ 0.84
BRCA1-228ENST00000618469 SSH1Q8WYL5 1049 aa20.31■□□□□ 0.84
BRCA1-228ENST00000618469 SEC31BQ9NQW1 1179 aa20.31■□□□□ 0.84
BRCA1-228ENST00000618469 H7C1W4 665 aa20.3■□□□□ 0.84
BRCA1-228ENST00000618469 BEND3Q5T5X7 828 aa20.3■□□□□ 0.84
BRCA1-228ENST00000618469 SLC4A10Q6U841 1118 aa20.3■□□□□ 0.84
BRCA1-228ENST00000618469 LARGE2Q8N3Y3 721 aa20.3■□□□□ 0.84
BRCA1-228ENST00000618469 MPNDQ8N594 471 aa20.3■□□□□ 0.84
BRCA1-228ENST00000618469 PPIP5K2O43314 1243 aa20.29■□□□□ 0.84
BRCA1-228ENST00000618469 SUPT20HQ8NEM7 779 aa20.29■□□□□ 0.84
BRCA1-228ENST00000618469 SMC4Q9NTJ3 1288 aa20.29■□□□□ 0.84
BRCA1-228ENST00000618469 PTPRCP08575 1304 aa20.28■□□□□ 0.84
BRCA1-228ENST00000618469 THSD7BQ9C0I4 1608 aa20.28■□□□□ 0.84
BRCA1-228ENST00000618469 ECE1P42892 770 aa20.28■□□□□ 0.84
BRCA1-228ENST00000618469 CASP7P55210 303 aa20.28■□□□□ 0.84
BRCA1-228ENST00000618469 RPS8P62241 208 aaKnown RBP20.28■□□□□ 0.84
BRCA1-228ENST00000618469 AOC3Q16853 763 aa20.28■□□□□ 0.84
BRCA1-228ENST00000618469 RTL9Q8NET4 1388 aa20.27■□□□□ 0.84
BRCA1-228ENST00000618469 CT47B1P0C2W7 299 aaPredicted RBP20.27■□□□□ 0.84
BRCA1-228ENST00000618469 ALDH1L2Q3SY69 923 aa20.27■□□□□ 0.84
BRCA1-228ENST00000618469 NIM1KQ8IY84 436 aa20.27■□□□□ 0.84
BRCA1-228ENST00000618469 TTLL11Q8NHH1 800 aa20.27■□□□□ 0.84
BRCA1-228ENST00000618469 RTFDC1Q9BY42 306 aaPredicted RBP20.27■□□□□ 0.84
BRCA1-228ENST00000618469 GREM2Q9H772 168 aa20.27■□□□□ 0.84
BRCA1-228ENST00000618469 ANKRD18AQ8IVF6 992 aa20.26■□□□□ 0.83
BRCA1-228ENST00000618469 CDC5LQ99459 802 aaKnown RBP20.26■□□□□ 0.83
BRCA1-228ENST00000618469 PLA2G12BQ9BX93 195 aa20.26■□□□□ 0.83
BRCA1-228ENST00000618469 SRCIN1Q9C0H9 1055 aa20.26■□□□□ 0.83
BRCA1-228ENST00000618469 NSFL1CQ9UNZ2 370 aaKnown RBP20.26■□□□□ 0.83
BRCA1-228ENST00000618469 TLL2Q9Y6L7 1015 aa20.26■□□□□ 0.83
BRCA1-228ENST00000618469 GPSM2P81274 684 aa20.25■□□□□ 0.83
BRCA1-228ENST00000618469 MCOLN1Q9GZU1 580 aa20.25■□□□□ 0.83
BRCA1-228ENST00000618469 ZNF408Q9H9D4 720 aa20.25■□□□□ 0.83
BRCA1-228ENST00000618469 GRM8O00222 908 aa20.24■□□□□ 0.83
BRCA1-228ENST00000618469 ALDH1L1O75891 902 aa20.24■□□□□ 0.83
BRCA1-228ENST00000618469 CELF2O95319 508 aaKnown RBP20.24■□□□□ 0.83
BRCA1-228ENST00000618469 USP50Q70EL3 339 aaPredicted RBP20.24■□□□□ 0.83
BRCA1-228ENST00000618469 GLIS2Q9BZE0 524 aaPredicted RBP20.24■□□□□ 0.83
BRCA1-228ENST00000618469 KIAA2012Q0VF49 1180 aa20.23■□□□□ 0.83
BRCA1-228ENST00000618469 VPS33BQ9H267 617 aa20.23■□□□□ 0.83
BRCA1-228ENST00000618469 C9orf78Q9NZ63 289 aaPredicted RBP20.23■□□□□ 0.83
BRCA1-228ENST00000618469 C6orf229H3BNL8 230 aa20.22■□□□□ 0.83
BRCA1-228ENST00000618469 RGS19P49795 217 aa20.22■□□□□ 0.83
BRCA1-228ENST00000618469 UFL1O94874 794 aa20.21■□□□□ 0.83
BRCA1-228ENST00000618469 ITGA6P23229 1130 aa20.21■□□□□ 0.83
BRCA1-228ENST00000618469 DLK2Q6UY11 383 aa20.21■□□□□ 0.83
BRCA1-228ENST00000618469 ZIC5Q96T25 663 aa20.21■□□□□ 0.83
BRCA1-228ENST00000618469 ANKIB1Q9P2G1 1089 aa20.21■□□□□ 0.83
BRCA1-228ENST00000618469 POLLQ9UGP5 575 aa20.21■□□□□ 0.83
BRCA1-228ENST00000618469 A0A1B0GUL6 1792 aa20.21■□□□□ 0.83
BRCA1-228ENST00000618469 DGKZQ13574 1117 aa20.2■□□□□ 0.82
BRCA1-228ENST00000618469 CIAPIN1Q6FI81 312 aa20.2■□□□□ 0.82
BRCA1-228ENST00000618469 SAPCD2Q86UD0 394 aa20.2■□□□□ 0.82
BRCA1-228ENST00000618469 GPRC5DQ9NZD1 345 aa20.2■□□□□ 0.82
BRCA1-228ENST00000618469 CHMP3Q9Y3E7 222 aa20.2■□□□□ 0.82
BRCA1-228ENST00000618469 ZBED9Q6R2W3 1325 aa20.2■□□□□ 0.82
BRCA1-228ENST00000618469 SHTN1A0MZ66 631 aa20.19■□□□□ 0.82
BRCA1-228ENST00000618469 RIMBP2O15034 1052 aa20.19■□□□□ 0.82
BRCA1-228ENST00000618469 CSF1RP07333 972 aa20.19■□□□□ 0.82
BRCA1-228ENST00000618469 MAP2K2P36507 400 aa20.19■□□□□ 0.82
BRCA1-228ENST00000618469 IGHMBP2P38935 993 aaKnown RBP20.19■□□□□ 0.82
BRCA1-228ENST00000618469 GMPSP49915 693 aaPredicted RBP20.19■□□□□ 0.82
BRCA1-228ENST00000618469 RARSP54136 660 aaKnown RBP20.19■□□□□ 0.82
BRCA1-228ENST00000618469 CXCL9Q07325 125 aa20.19■□□□□ 0.82
BRCA1-228ENST00000618469 WASHC4Q2M389 1173 aa20.19■□□□□ 0.82
BRCA1-228ENST00000618469 TBC1D16Q8TBP0 767 aa20.19■□□□□ 0.82
BRCA1-228ENST00000618469 EYA3Q99504 573 aa20.19■□□□□ 0.82
BRCA1-228ENST00000618469 ADARB2Q9NS39 739 aaKnown RBP20.19■□□□□ 0.82
BRCA1-228ENST00000618469 PODXL2Q9NZ53 605 aa20.19■□□□□ 0.82
BRCA1-228ENST00000618469 GGA1Q9UJY5 639 aa20.19■□□□□ 0.82
BRCA1-228ENST00000618469 ZNRF3Q9ULT6 936 aa20.19■□□□□ 0.82
BRCA1-228ENST00000618469 XDHP47989 1333 aa20.19■□□□□ 0.82
BRCA1-228ENST00000618469 FOXO4P98177 505 aa20.18■□□□□ 0.82
BRCA1-228ENST00000618469 BSDC1Q9NW68 430 aaPredicted RBP20.18■□□□□ 0.82
BRCA1-228ENST00000618469 KIF16BQ96L93 1317 aa20.18■□□□□ 0.82
BRCA1-228ENST00000618469 ANKRD18BA2A2Z9 1011 aa20.17■□□□□ 0.82
BRCA1-228ENST00000618469 EPHA10Q5JZY3 1008 aa20.17■□□□□ 0.82
BRCA1-228ENST00000618469 LMBR1LQ6UX01 489 aa20.17■□□□□ 0.82
BRCA1-228ENST00000618469 SUCLG2Q96I99 432 aa20.17■□□□□ 0.82
BRCA1-228ENST00000618469 DBNDD1Q9H9R9 158 aa20.17■□□□□ 0.82
BRCA1-228ENST00000618469 NOB1Q9ULX3 412 aaKnown RBP20.17■□□□□ 0.82
BRCA1-228ENST00000618469 RAD17O75943 681 aa20.16■□□□□ 0.82
BRCA1-228ENST00000618469 NBPF7P0C2Y1 421 aaPredicted RBP20.16■□□□□ 0.82
BRCA1-228ENST00000618469 HIRAP54198 1017 aaPredicted RBP20.16■□□□□ 0.82
BRCA1-228ENST00000618469 TRPM4Q8TD43 1214 aa20.16■□□□□ 0.82
BRCA1-228ENST00000618469 MPHOSPH8Q99549 860 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms