RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 ATG9AQ7Z3C6 839 aa28.19■■■□□ 2.1
CBWD3-213ENST00000618217 NOP58Q9Y2X3 529 aaKnown RBP28.19■■■□□ 2.1
CBWD3-213ENST00000618217 A0A1B0GUL6 1792 aa28.19■■■□□ 2.1
CBWD3-213ENST00000618217 YBX3P16989 372 aaKnown RBP eCLIP28.18■■■□□ 2.1
CBWD3-213ENST00000618217 ZNF219Q9P2Y4 722 aaPredicted RBP28.18■■■□□ 2.1
CBWD3-213ENST00000618217 LTBP1Q14766 1721 aa28.18■■■□□ 2.1
CBWD3-213ENST00000618217 CIAO1O76071 339 aa28.18■■■□□ 2.1
CBWD3-213ENST00000618217 CC2D2BQ6DHV5 1058 aa28.18■■■□□ 2.1
CBWD3-213ENST00000618217 SIL1Q9H173 461 aa28.18■■■□□ 2.1
CBWD3-213ENST00000618217 CNNM1Q9NRU3 951 aa28.17■■■□□ 2.1
CBWD3-213ENST00000618217 FER1L6Q2WGJ9 1857 aa28.16■■■□□ 2.1
CBWD3-213ENST00000618217 HDAC1Q13547 482 aaPredicted RBP28.15■■■□□ 2.1
CBWD3-213ENST00000618217 SURF6O75683 361 aaKnown RBP28.14■■■□□ 2.1
CBWD3-213ENST00000618217 CHRNDQ07001 517 aa28.14■■■□□ 2.1
CBWD3-213ENST00000618217 SOGA3Q5TF21 947 aa28.14■■■□□ 2.1
CBWD3-213ENST00000618217 GPSM2P81274 684 aa28.14■■■□□ 2.09
CBWD3-213ENST00000618217 PODXL2Q9NZ53 605 aa28.14■■■□□ 2.09
CBWD3-213ENST00000618217 IL15P40933 162 aaPredicted RBP28.13■■■□□ 2.09
CBWD3-213ENST00000618217 CCDC93Q567U6 631 aa28.13■■■□□ 2.09
CBWD3-213ENST00000618217 VGLL2Q8N8G2 317 aa28.13■■■□□ 2.09
CBWD3-213ENST00000618217 MROH5Q6ZUA9 1318 aa28.12■■■□□ 2.09
CBWD3-213ENST00000618217 GRIPAP1Q4V328 841 aa28.12■■■□□ 2.09
CBWD3-213ENST00000618217 RTKN2Q8IZC4 609 aa28.12■■■□□ 2.09
CBWD3-213ENST00000618217 DCTPP1Q9H773 170 aa28.12■■■□□ 2.09
CBWD3-213ENST00000618217 DUOX1Q9NRD9 1551 aa28.12■■■□□ 2.09
CBWD3-213ENST00000618217 MPNDQ8N594 471 aa28.11■■■□□ 2.09
CBWD3-213ENST00000618217 HELBQ8NG08 1087 aaPredicted RBP28.11■■■□□ 2.09
CBWD3-213ENST00000618217 ANKRD2Q9GZV1 360 aa28.11■■■□□ 2.09
CBWD3-213ENST00000618217 NSFL1CQ9UNZ2 370 aaKnown RBP28.11■■■□□ 2.09
CBWD3-213ENST00000618217 EXOC6BQ9Y2D4 811 aa28.11■■■□□ 2.09
CBWD3-213ENST00000618217 SASH1O94885 1247 aa28.1■■■□□ 2.09
CBWD3-213ENST00000618217 G3BP1Q13283 466 aaKnown RBP eCLIP28.1■■■□□ 2.09
CBWD3-213ENST00000618217 PELP1Q8IZL8 1130 aaKnown RBP28.1■■■□□ 2.09
CBWD3-213ENST00000618217 TMX4Q9H1E5 349 aaPredicted RBP28.1■■■□□ 2.09
CBWD3-213ENST00000618217 XDHP47989 1333 aa28.1■■■□□ 2.09
CBWD3-213ENST00000618217 WTIPA6NIX2 430 aaPredicted RBP28.1■■■□□ 2.09
CBWD3-213ENST00000618217 TAF5LO75529 589 aa28.1■■■□□ 2.09
CBWD3-213ENST00000618217 IGHDP01880 384 aa28.1■■■□□ 2.09
CBWD3-213ENST00000618217 GPR162Q16538 588 aa28.1■■■□□ 2.09
CBWD3-213ENST00000618217 RTFDC1Q9BY42 306 aaPredicted RBP28.1■■■□□ 2.09
CBWD3-213ENST00000618217 GTF3C3Q9Y5Q9 886 aa28.1■■■□□ 2.09
CBWD3-213ENST00000618217 METTL24Q5JXM2 366 aa28.09■■■□□ 2.09
CBWD3-213ENST00000618217 ERICH6BQ5W0A0 696 aa28.09■■■□□ 2.09
CBWD3-213ENST00000618217 ANKIB1Q9P2G1 1089 aa28.09■■■□□ 2.09
CBWD3-213ENST00000618217 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.09■■■□□ 2.09
CBWD3-213ENST00000618217 NFKBIEO00221 500 aa28.08■■■□□ 2.09
CBWD3-213ENST00000618217 PDE8BO95263 885 aa28.08■■■□□ 2.09
CBWD3-213ENST00000618217 DPP8Q6V1X1 898 aaPredicted RBP28.08■■■□□ 2.09
CBWD3-213ENST00000618217 POLLQ9UGP5 575 aa28.08■■■□□ 2.09
CBWD3-213ENST00000618217 TBC1D16Q8TBP0 767 aa28.07■■■□□ 2.08
CBWD3-213ENST00000618217 PSMD1Q99460 953 aa28.07■■■□□ 2.08
CBWD3-213ENST00000618217 RWDD1Q9H446 243 aaPredicted RBP28.07■■■□□ 2.08
CBWD3-213ENST00000618217 HSP90AB4PQ58FF6 505 aa28.07■■■□□ 2.08
CBWD3-213ENST00000618217 CEP126Q9P2H0 1117 aa28.07■■■□□ 2.08
CBWD3-213ENST00000618217 SNAP23O00161 211 aa28.06■■■□□ 2.08
CBWD3-213ENST00000618217 TFCP2Q12800 502 aa28.06■■■□□ 2.08
CBWD3-213ENST00000618217 LEMD3Q9Y2U8 911 aa28.06■■■□□ 2.08
CBWD3-213ENST00000618217 LTBP3Q9NS15 1303 aa28.06■■■□□ 2.08
CBWD3-213ENST00000618217 FKBP4Q02790 459 aaKnown RBP eCLIP28.05■■■□□ 2.08
CBWD3-213ENST00000618217 ARHGAP27Q6ZUM4 889 aa28.05■■■□□ 2.08
CBWD3-213ENST00000618217 GGA1Q9UJY5 639 aa28.05■■■□□ 2.08
CBWD3-213ENST00000618217 RAB11FIP3O75154 756 aa28.04■■■□□ 2.08
CBWD3-213ENST00000618217 ATP2B4P23634 1241 aa28.04■■■□□ 2.08
CBWD3-213ENST00000618217 OS9Q13438 667 aaPredicted RBP28.04■■■□□ 2.08
CBWD3-213ENST00000618217 GRIN3BO60391 1043 aa28.03■■■□□ 2.08
CBWD3-213ENST00000618217 UFL1O94874 794 aa28.03■■■□□ 2.08
CBWD3-213ENST00000618217 FGFR2P21802 821 aa28.03■■■□□ 2.08
CBWD3-213ENST00000618217 ERC1Q8IUD2 1116 aa28.03■■■□□ 2.08
CBWD3-213ENST00000618217 UTRNP46939 3433 aa28.03■■■□□ 2.08
CBWD3-213ENST00000618217 ZNF804BA4D1E1 1349 aa28.03■■■□□ 2.08
CBWD3-213ENST00000618217 SBF1O95248 1867 aa28.03■■■□□ 2.08
CBWD3-213ENST00000618217 UBE4AQ14139 1066 aa28.03■■■□□ 2.08
CBWD3-213ENST00000618217 TAOK3Q9H2K8 898 aa28.03■■■□□ 2.08
CBWD3-213ENST00000618217 IRS2Q9Y4H2 1338 aa28.03■■■□□ 2.08
CBWD3-213ENST00000618217 PRELPP51888 382 aa28.02■■■□□ 2.08
CBWD3-213ENST00000618217 SMC5Q8IY18 1101 aa28.02■■■□□ 2.08
CBWD3-213ENST00000618217 RHPN1Q8TCX5 695 aa28.02■■■□□ 2.08
CBWD3-213ENST00000618217 CCDC88AQ3V6T2 1871 aa28.02■■■□□ 2.08
CBWD3-213ENST00000618217 C6orf229H3BNL8 230 aa28.01■■■□□ 2.07
CBWD3-213ENST00000618217 RASSF7Q02833 373 aa28■■■□□ 2.07
CBWD3-213ENST00000618217 PUM3Q15397 648 aaKnown RBP28■■■□□ 2.07
CBWD3-213ENST00000618217 SUPT20HQ8NEM7 779 aa28■■■□□ 2.07
CBWD3-213ENST00000618217 GCC1Q96CN9 775 aa28■■■□□ 2.07
CBWD3-213ENST00000618217 KIF1BPQ96EK5 621 aa28■■■□□ 2.07
CBWD3-213ENST00000618217 GPR101Q96P66 508 aaPredicted RBP28■■■□□ 2.07
CBWD3-213ENST00000618217 GPR108Q9NPR9 543 aa28■■■□□ 2.07
CBWD3-213ENST00000618217 APBB1O00213 710 aa28■■■□□ 2.07
CBWD3-213ENST00000618217 C15orf52Q6ZUT6 534 aaKnown RBP28■■■□□ 2.07
CBWD3-213ENST00000618217 ZNF277Q9NRM2 450 aaPredicted RBP28■■■□□ 2.07
CBWD3-213ENST00000618217 KLRK1P26718 216 aa27.99■■■□□ 2.07
CBWD3-213ENST00000618217 TXNRD3Q86VQ6 643 aa27.99■■■□□ 2.07
CBWD3-213ENST00000618217 KCNJ4P48050 445 aa27.98■■■□□ 2.07
CBWD3-213ENST00000618217 ATP2B3Q16720 1220 aa27.98■■■□□ 2.07
CBWD3-213ENST00000618217 LPIN2Q92539 896 aa27.98■■■□□ 2.07
CBWD3-213ENST00000618217 VPS33BQ9H267 617 aa27.98■■■□□ 2.07
CBWD3-213ENST00000618217 AKAP2Q9Y2D5 859 aa27.98■■■□□ 2.07
CBWD3-213ENST00000618217 ARAP2Q8WZ64 1704 aa27.98■■■□□ 2.07
CBWD3-213ENST00000618217 MED23Q9ULK4 1368 aa27.97■■■□□ 2.07
CBWD3-213ENST00000618217 TIMM10P62072 90 aa27.97■■■□□ 2.07
CBWD3-213ENST00000618217 WASHC4Q2M389 1173 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms