RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 FZD9O00144 591 aa7.24□□□□□ -1.25
CPNE3-208ENST00000614678 CXCL9Q07325 125 aa7.24□□□□□ -1.25
CPNE3-208ENST00000614678 C20orf194Q5TEA3 1177 aa7.24□□□□□ -1.25
CPNE3-208ENST00000614678 ANKIB1Q9P2G1 1089 aa7.24□□□□□ -1.25
CPNE3-208ENST00000614678 MKI67P46013 3256 aaKnown RBP7.24□□□□□ -1.25
CPNE3-208ENST00000614678 CSF1RP07333 972 aa7.23□□□□□ -1.25
CPNE3-208ENST00000614678 SCNN1DP51172 638 aa7.23□□□□□ -1.25
CPNE3-208ENST00000614678 RTL9Q8NET4 1388 aa7.23□□□□□ -1.25
CPNE3-208ENST00000614678 CDHR2Q9BYE9 1310 aa7.23□□□□□ -1.25
CPNE3-208ENST00000614678 PA2G4Q9UQ80 394 aaKnown RBP7.23□□□□□ -1.25
CPNE3-208ENST00000614678 UFL1O94874 794 aa7.23□□□□□ -1.25
CPNE3-208ENST00000614678 RTKN2Q8IZC4 609 aa7.23□□□□□ -1.25
CPNE3-208ENST00000614678 PCDHAC2Q9Y5I4 1007 aa7.23□□□□□ -1.25
CPNE3-208ENST00000614678 BBOX1O75936 387 aa7.23□□□□□ -1.25
CPNE3-208ENST00000614678 CCDC152Q4G0S7 254 aa7.23□□□□□ -1.25
CPNE3-208ENST00000614678 PANK1Q8TE04 598 aa7.23□□□□□ -1.25
CPNE3-208ENST00000614678 PSMD1Q99460 953 aa7.23□□□□□ -1.25
CPNE3-208ENST00000614678 LTBP3Q9NS15 1303 aa7.22□□□□□ -1.25
CPNE3-208ENST00000614678 WASHC4Q2M389 1173 aa7.22□□□□□ -1.25
CPNE3-208ENST00000614678 EAPPQ56P03 285 aaPredicted RBP7.22□□□□□ -1.25
CPNE3-208ENST00000614678 ZBED9Q6R2W3 1325 aa7.22□□□□□ -1.25
CPNE3-208ENST00000614678 ANKRD18AQ8IVF6 992 aa7.22□□□□□ -1.25
CPNE3-208ENST00000614678 TMEM57Q8N5G2 664 aa7.22□□□□□ -1.25
CPNE3-208ENST00000614678 SIL1Q9H173 461 aa7.22□□□□□ -1.25
CPNE3-208ENST00000614678 IQSEC3Q9UPP2 1182 aaPredicted RBP7.22□□□□□ -1.25
CPNE3-208ENST00000614678 HIRAP54198 1017 aaPredicted RBP7.22□□□□□ -1.25
CPNE3-208ENST00000614678 CHRNDQ07001 517 aa7.22□□□□□ -1.25
CPNE3-208ENST00000614678 MAP1SQ66K74 1059 aaPredicted RBP7.22□□□□□ -1.25
CPNE3-208ENST00000614678 PSMD14O00487 310 aa7.22□□□□□ -1.25
CPNE3-208ENST00000614678 KIAA2012Q0VF49 1180 aa7.22□□□□□ -1.25
CPNE3-208ENST00000614678 SAMD7Q7Z3H4 446 aa7.22□□□□□ -1.25
CPNE3-208ENST00000614678 RTFDC1Q9BY42 306 aaPredicted RBP7.22□□□□□ -1.25
CPNE3-208ENST00000614678 LRRFIP2Q9Y608 721 aaKnown RBP7.22□□□□□ -1.25
CPNE3-208ENST00000614678 AOX1Q06278 1338 aa7.21□□□□□ -1.25
CPNE3-208ENST00000614678 TRPM4Q8TD43 1214 aa7.21□□□□□ -1.25
CPNE3-208ENST00000614678 PDZRN3Q9UPQ7 1066 aa7.21□□□□□ -1.25
CPNE3-208ENST00000614678 POLR2AP24928 1970 aaKnown RBP7.21□□□□□ -1.25
CPNE3-208ENST00000614678 TRAF5O00463 557 aa7.21□□□□□ -1.26
CPNE3-208ENST00000614678 ECE2O60344 883 aa7.21□□□□□ -1.26
CPNE3-208ENST00000614678 RBM26Q5T8P6 1007 aaKnown RBP7.21□□□□□ -1.26
CPNE3-208ENST00000614678 BCL11AQ9H165 835 aa7.21□□□□□ -1.26
CPNE3-208ENST00000614678 GMPSP49915 693 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-208ENST00000614678 ALDH1L2Q3SY69 923 aa7.21□□□□□ -1.26
CPNE3-208ENST00000614678 JDP2Q8WYK2 163 aa7.21□□□□□ -1.26
CPNE3-208ENST00000614678 PLA2G12BQ9BX93 195 aa7.21□□□□□ -1.26
CPNE3-208ENST00000614678 GRIK5Q16478 980 aa7.2□□□□□ -1.26
CPNE3-208ENST00000614678 TAF1DQ9H5J8 278 aaPredicted RBP7.2□□□□□ -1.26
CPNE3-208ENST00000614678 A0A1B0GUL6 1792 aa7.2□□□□□ -1.26
CPNE3-208ENST00000614678 PNMA6EA0A0J9YXQ4 647 aa7.2□□□□□ -1.26
CPNE3-208ENST00000614678 CCT4P50991 539 aaKnown RBP7.2□□□□□ -1.26
CPNE3-208ENST00000614678 NIM1KQ8IY84 436 aa7.2□□□□□ -1.26
CPNE3-208ENST00000614678 BSDC1Q9NW68 430 aaPredicted RBP7.2□□□□□ -1.26
CPNE3-208ENST00000614678 VEGFAP15692 232 aaPredicted RBP7.2□□□□□ -1.26
CPNE3-208ENST00000614678 GYG1P46976 350 aa7.2□□□□□ -1.26
CPNE3-208ENST00000614678 RFX5P48382 616 aaPredicted RBP7.2□□□□□ -1.26
CPNE3-208ENST00000614678 DPY19L2Q6NUT2 758 aa7.2□□□□□ -1.26
CPNE3-208ENST00000614678 PTPRCP08575 1304 aa7.2□□□□□ -1.26
CPNE3-208ENST00000614678 KDM2BQ8NHM5 1336 aa7.2□□□□□ -1.26
CPNE3-208ENST00000614678 IRS2Q9Y4H2 1338 aa7.2□□□□□ -1.26
CPNE3-208ENST00000614678 HTTP42858 3142 aa7.2□□□□□ -1.26
CPNE3-208ENST00000614678 TOMM70O94826 608 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 IFIT5Q13325 482 aaKnown RBP7.19□□□□□ -1.26
CPNE3-208ENST00000614678 PRAMEF18Q5VWM3 479 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 LDHAL6AQ6ZMR3 332 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 FBXW7Q969H0 707 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 GGA1Q9UJY5 639 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 ZNRF3Q9ULT6 936 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 UTYO14607 1347 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 ALDH1L1O75891 902 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 TBC1D10BQ4KMP7 808 aaPredicted RBP7.19□□□□□ -1.26
CPNE3-208ENST00000614678 SOGA3Q5TF21 947 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 ATF7IPQ6VMQ6 1270 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 MPHOSPH8Q99549 860 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 FZD1Q9UP38 647 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 WDR90Q96KV7 1748 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 ANKRD18BA2A2Z9 1011 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 EPHX2P34913 555 aa7.19□□□□□ -1.26
CPNE3-208ENST00000614678 PTPN12Q05209 780 aaKnown RBP7.19□□□□□ -1.26
CPNE3-208ENST00000614678 ZNF646O15015 1829 aaPredicted RBP7.19□□□□□ -1.26
CPNE3-208ENST00000614678 ADAMTSL1Q8N6G6 1762 aa7.18□□□□□ -1.26
CPNE3-208ENST00000614678 IGHMBP2P38935 993 aaKnown RBP7.18□□□□□ -1.26
CPNE3-208ENST00000614678 CCDC57Q2TAC2 916 aa7.18□□□□□ -1.26
CPNE3-208ENST00000614678 RABL6Q3YEC7 729 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-208ENST00000614678 GPC2Q8N158 579 aa7.18□□□□□ -1.26
CPNE3-208ENST00000614678 CERS5Q8N5B7 392 aa7.18□□□□□ -1.26
CPNE3-208ENST00000614678 ZC3H12CQ9C0D7 883 aaKnown RBP7.18□□□□□ -1.26
CPNE3-208ENST00000614678 PODXL2Q9NZ53 605 aa7.18□□□□□ -1.26
CPNE3-208ENST00000614678 CLEC11AQ9Y240 323 aa7.18□□□□□ -1.26
CPNE3-208ENST00000614678 RIPOR2Q9Y4F9 1068 aa7.18□□□□□ -1.26
CPNE3-208ENST00000614678 ZNF804BA4D1E1 1349 aa7.18□□□□□ -1.26
CPNE3-208ENST00000614678 XDHP47989 1333 aa7.18□□□□□ -1.26
CPNE3-208ENST00000614678 F8W031 263 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-208ENST00000614678 ATG9AQ7Z3C6 839 aa7.18□□□□□ -1.26
CPNE3-208ENST00000614678 MICALL2Q8IY33 904 aa7.18□□□□□ -1.26
CPNE3-208ENST00000614678 CDC5LQ99459 802 aaKnown RBP7.18□□□□□ -1.26
CPNE3-208ENST00000614678 CNNM1Q9NRU3 951 aa7.18□□□□□ -1.26
CPNE3-208ENST00000614678 EIF6P56537 245 aaKnown RBP7.18□□□□□ -1.26
CPNE3-208ENST00000614678 COG6Q9Y2V7 657 aa7.18□□□□□ -1.26
CPNE3-208ENST00000614678 CIAPIN1Q6FI81 312 aa7.17□□□□□ -1.26
CPNE3-208ENST00000614678 L3MBTL3Q96JM7 780 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms