RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 FBXO3Q9UK99 471 aa16.17■□□□□ 0.18
SRGAP2C-204ENST00000613462 DUOX1Q9NRD9 1551 aa16.17■□□□□ 0.18
SRGAP2C-204ENST00000613462 NEFLP07196 543 aa16.16■□□□□ 0.18
SRGAP2C-204ENST00000613462 LDHAL6AQ6ZMR3 332 aa16.16■□□□□ 0.18
SRGAP2C-204ENST00000613462 ARHGAP27Q6ZUM4 889 aa16.16■□□□□ 0.18
SRGAP2C-204ENST00000613462 SUPT20HQ8NEM7 779 aa16.16■□□□□ 0.18
SRGAP2C-204ENST00000613462 PSMD1Q99460 953 aa16.16■□□□□ 0.18
SRGAP2C-204ENST00000613462 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
SRGAP2C-204ENST00000613462 FKBP4Q02790 459 aaKnown RBP eCLIP16.15■□□□□ 0.18
SRGAP2C-204ENST00000613462 DPP8Q6V1X1 898 aaPredicted RBP16.15■□□□□ 0.18
SRGAP2C-204ENST00000613462 RPAP2Q8IXW5 612 aaPredicted RBP16.15■□□□□ 0.18
SRGAP2C-204ENST00000613462 ANKRD2Q9GZV1 360 aa16.15■□□□□ 0.18
SRGAP2C-204ENST00000613462 C1orf115Q9H7X2 142 aa16.15■□□□□ 0.18
SRGAP2C-204ENST00000613462 GPBP1L1Q9HC44 474 aaPredicted RBP16.15■□□□□ 0.18
SRGAP2C-204ENST00000613462 COPRSQ9NQ92 184 aa16.15■□□□□ 0.18
SRGAP2C-204ENST00000613462 CNNM1Q9NRU3 951 aa16.15■□□□□ 0.18
SRGAP2C-204ENST00000613462 PODXL2Q9NZ53 605 aa16.15■□□□□ 0.18
SRGAP2C-204ENST00000613462 XDHP47989 1333 aa16.15■□□□□ 0.18
SRGAP2C-204ENST00000613462 HMMRO75330 724 aa16.14■□□□□ 0.17
SRGAP2C-204ENST00000613462 CIAO1O76071 339 aa16.14■□□□□ 0.17
SRGAP2C-204ENST00000613462 RFX5P48382 616 aaPredicted RBP16.14■□□□□ 0.17
SRGAP2C-204ENST00000613462 ATP8B2P98198 1209 aa16.14■□□□□ 0.17
SRGAP2C-204ENST00000613462 CEP85Q6P2H3 762 aa16.14■□□□□ 0.17
SRGAP2C-204ENST00000613462 MPNDQ8N594 471 aa16.14■□□□□ 0.17
SRGAP2C-204ENST00000613462 SSH3Q8TE77 659 aa16.14■□□□□ 0.17
SRGAP2C-204ENST00000613462 CRBNQ96SW2 442 aa16.14■□□□□ 0.17
SRGAP2C-204ENST00000613462 ANKIB1Q9P2G1 1089 aa16.14■□□□□ 0.17
SRGAP2C-204ENST00000613462 MINPP1Q9UNW1 487 aa16.14■□□□□ 0.17
SRGAP2C-204ENST00000613462 MROH5Q6ZUA9 1318 aa16.14■□□□□ 0.17
SRGAP2C-204ENST00000613462 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
SRGAP2C-204ENST00000613462 KIF3CO14782 793 aa16.13■□□□□ 0.17
SRGAP2C-204ENST00000613462 PTPN12Q05209 780 aaKnown RBP16.13■□□□□ 0.17
SRGAP2C-204ENST00000613462 OLFM4Q6UX06 510 aa16.13■□□□□ 0.17
SRGAP2C-204ENST00000613462 DNAJC5GQ8N7S2 189 aa16.13■□□□□ 0.17
SRGAP2C-204ENST00000613462 ZNF594Q96JF6 807 aaPredicted RBP16.13■□□□□ 0.17
SRGAP2C-204ENST00000613462 RTFDC1Q9BY42 306 aaPredicted RBP16.13■□□□□ 0.17
SRGAP2C-204ENST00000613462 VPS33BQ9H267 617 aa16.13■□□□□ 0.17
SRGAP2C-204ENST00000613462 NSFL1CQ9UNZ2 370 aaKnown RBP16.13■□□□□ 0.17
SRGAP2C-204ENST00000613462 MYH13Q9UKX3 1938 aa16.12■□□□□ 0.17
SRGAP2C-204ENST00000613462 EYA2O00167 538 aa16.12■□□□□ 0.17
SRGAP2C-204ENST00000613462 NFKBIEO00221 500 aa16.12■□□□□ 0.17
SRGAP2C-204ENST00000613462 LMNB1P20700 586 aa16.12■□□□□ 0.17
SRGAP2C-204ENST00000613462 CHRNDQ07001 517 aa16.12■□□□□ 0.17
SRGAP2C-204ENST00000613462 POLA2Q14181 598 aa16.12■□□□□ 0.17
SRGAP2C-204ENST00000613462 GGA1Q9UJY5 639 aa16.12■□□□□ 0.17
SRGAP2C-204ENST00000613462 PSME4Q14997 1843 aa16.12■□□□□ 0.17
SRGAP2C-204ENST00000613462 PNMA6EA0A0J9YXQ4 647 aa16.11■□□□□ 0.17
SRGAP2C-204ENST00000613462 ATP2B4P23634 1241 aa16.11■□□□□ 0.17
SRGAP2C-204ENST00000613462 GPSM2P81274 684 aa16.11■□□□□ 0.17
SRGAP2C-204ENST00000613462 EYA3Q99504 573 aa16.11■□□□□ 0.17
SRGAP2C-204ENST00000613462 LEMD3Q9Y2U8 911 aa16.11■□□□□ 0.17
SRGAP2C-204ENST00000613462 RIPOR2Q9Y4F9 1068 aa16.11■□□□□ 0.17
SRGAP2C-204ENST00000613462 UFL1O94874 794 aa16.1■□□□□ 0.17
SRGAP2C-204ENST00000613462 IL15P40933 162 aaPredicted RBP16.1■□□□□ 0.17
SRGAP2C-204ENST00000613462 RASSF7Q02833 373 aa16.1■□□□□ 0.17
SRGAP2C-204ENST00000613462 KLHDC4Q8TBB5 520 aa16.1■□□□□ 0.17
SRGAP2C-204ENST00000613462 ZNF526Q8TF50 670 aaPredicted RBP16.1■□□□□ 0.17
SRGAP2C-204ENST00000613462 ZC3H4Q9UPT8 1303 aaKnown RBP16.1■□□□□ 0.17
SRGAP2C-204ENST00000613462 C6orf229H3BNL8 230 aa16.09■□□□□ 0.17
SRGAP2C-204ENST00000613462 IARSP41252 1262 aaKnown RBP16.09■□□□□ 0.17
SRGAP2C-204ENST00000613462 KCNJ4P48050 445 aa16.09■□□□□ 0.17
SRGAP2C-204ENST00000613462 HSP90AB4PQ58FF6 505 aa16.09■□□□□ 0.17
SRGAP2C-204ENST00000613462 METTL24Q5JXM2 366 aa16.09■□□□□ 0.17
SRGAP2C-204ENST00000613462 TBC1D16Q8TBP0 767 aa16.09■□□□□ 0.17
SRGAP2C-204ENST00000613462 PUS3Q9BZE2 481 aaKnown RBP16.09■□□□□ 0.17
SRGAP2C-204ENST00000613462 SIL1Q9H173 461 aa16.09■□□□□ 0.17
SRGAP2C-204ENST00000613462 MED23Q9ULK4 1368 aa16.09■□□□□ 0.17
SRGAP2C-204ENST00000613462 LRRC24Q50LG9 513 aa16.08■□□□□ 0.16
SRGAP2C-204ENST00000613462 ZNF277Q9NRM2 450 aaPredicted RBP16.08■□□□□ 0.16
SRGAP2C-204ENST00000613462 POLLQ9UGP5 575 aa16.08■□□□□ 0.16
SRGAP2C-204ENST00000613462 PA2G4Q9UQ80 394 aaKnown RBP16.08■□□□□ 0.16
SRGAP2C-204ENST00000613462 ZNF804BA4D1E1 1349 aa16.08■□□□□ 0.16
SRGAP2C-204ENST00000613462 PPIP5K2O43314 1243 aa16.07■□□□□ 0.16
SRGAP2C-204ENST00000613462 PDE8BO95263 885 aa16.07■□□□□ 0.16
SRGAP2C-204ENST00000613462 KIAA2012Q0VF49 1180 aa16.07■□□□□ 0.16
SRGAP2C-204ENST00000613462 G3BP1Q13283 466 aaKnown RBP eCLIP16.07■□□□□ 0.16
SRGAP2C-204ENST00000613462 UBE4AQ14139 1066 aa16.07■□□□□ 0.16
SRGAP2C-204ENST00000613462 WASHC4Q2M389 1173 aa16.07■□□□□ 0.16
SRGAP2C-204ENST00000613462 ATG9AQ7Z3C6 839 aa16.07■□□□□ 0.16
SRGAP2C-204ENST00000613462 SLC51AQ86UW1 340 aa16.07■□□□□ 0.16
SRGAP2C-204ENST00000613462 VGLL2Q8N8G2 317 aa16.07■□□□□ 0.16
SRGAP2C-204ENST00000613462 CEP126Q9P2H0 1117 aa16.07■□□□□ 0.16
SRGAP2C-204ENST00000613462 NOP58Q9Y2X3 529 aaKnown RBP16.07■□□□□ 0.16
SRGAP2C-204ENST00000613462 WDR90Q96KV7 1748 aa16.07■□□□□ 0.16
SRGAP2C-204ENST00000613462 SURF6O75683 361 aaKnown RBP16.06■□□□□ 0.16
SRGAP2C-204ENST00000613462 PUM3Q15397 648 aaKnown RBP16.06■□□□□ 0.16
SRGAP2C-204ENST00000613462 ERC1Q8IUD2 1116 aa16.06■□□□□ 0.16
SRGAP2C-204ENST00000613462 SIRT2Q8IXJ6 389 aa16.06■□□□□ 0.16
SRGAP2C-204ENST00000613462 LARGE2Q8N3Y3 721 aa16.06■□□□□ 0.16
SRGAP2C-204ENST00000613462 EXOC6Q8TAG9 804 aa16.06■□□□□ 0.16
SRGAP2C-204ENST00000613462 JDP2Q8WYK2 163 aa16.06■□□□□ 0.16
SRGAP2C-204ENST00000613462 ZC3H12CQ9C0D7 883 aaKnown RBP16.06■□□□□ 0.16
SRGAP2C-204ENST00000613462 RNF181Q9P0P0 153 aa16.06■□□□□ 0.16
SRGAP2C-204ENST00000613462 TAF5LO75529 589 aa16.05■□□□□ 0.16
SRGAP2C-204ENST00000613462 OS9Q13438 667 aaPredicted RBP16.05■□□□□ 0.16
SRGAP2C-204ENST00000613462 C9orf131Q5VYM1 1079 aa16.05■□□□□ 0.16
SRGAP2C-204ENST00000613462 C15orf52Q6ZUT6 534 aaKnown RBP16.05■□□□□ 0.16
SRGAP2C-204ENST00000613462 AKAP2Q9Y2D5 859 aa16.05■□□□□ 0.16
SRGAP2C-204ENST00000613462 SCN9AQ15858 1988 aa16.04■□□□□ 0.16
SRGAP2C-204ENST00000613462 PRELPP51888 382 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms