RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 PODXL2Q9NZ53 605 aa20.8■□□□□ 0.92
IRF1-211ENST00000613424 ANKIB1Q9P2G1 1089 aa20.8■□□□□ 0.92
IRF1-211ENST00000613424 SPEF2Q9C093 1822 aa20.79■□□□□ 0.92
IRF1-211ENST00000613424 LDHAL6AQ6ZMR3 332 aa20.79■□□□□ 0.92
IRF1-211ENST00000613424 POLLQ9UGP5 575 aa20.79■□□□□ 0.92
IRF1-211ENST00000613424 COG6Q9Y2V7 657 aa20.79■□□□□ 0.92
IRF1-211ENST00000613424 RFX5P48382 616 aaPredicted RBP20.78■□□□□ 0.92
IRF1-211ENST00000613424 MVPQ14764 893 aaKnown RBP20.78■□□□□ 0.92
IRF1-211ENST00000613424 TBC1D16Q8TBP0 767 aa20.78■□□□□ 0.92
IRF1-211ENST00000613424 VPS33BQ9H267 617 aa20.78■□□□□ 0.92
IRF1-211ENST00000613424 XDHP47989 1333 aa20.78■□□□□ 0.92
IRF1-211ENST00000613424 C6orf229H3BNL8 230 aa20.77■□□□□ 0.92
IRF1-211ENST00000613424 KLHDC4Q8TBB5 520 aa20.77■□□□□ 0.92
IRF1-211ENST00000613424 CNNM1Q9NRU3 951 aa20.77■□□□□ 0.92
IRF1-211ENST00000613424 GGA1Q9UJY5 639 aa20.77■□□□□ 0.92
IRF1-211ENST00000613424 PPIP5K2O43314 1243 aa20.76■□□□□ 0.91
IRF1-211ENST00000613424 RRP1P56182 461 aaKnown RBP20.76■□□□□ 0.91
IRF1-211ENST00000613424 CHRNDQ07001 517 aa20.76■□□□□ 0.91
IRF1-211ENST00000613424 AOC3Q16853 763 aa20.76■□□□□ 0.91
IRF1-211ENST00000613424 PUS3Q9BZE2 481 aaKnown RBP20.76■□□□□ 0.91
IRF1-211ENST00000613424 ANKRD2Q9GZV1 360 aa20.76■□□□□ 0.91
IRF1-211ENST00000613424 DDX19BQ9UMR2 479 aa20.76■□□□□ 0.91
IRF1-211ENST00000613424 DICER1Q9UPY3 1922 aaKnown RBP20.76■□□□□ 0.91
IRF1-211ENST00000613424 DUOX1Q9NRD9 1551 aa20.76■□□□□ 0.91
IRF1-211ENST00000613424 WTIPA6NIX2 430 aaPredicted RBP20.75■□□□□ 0.91
IRF1-211ENST00000613424 UFL1O94874 794 aa20.75■□□□□ 0.91
IRF1-211ENST00000613424 ATP2B4P23634 1241 aa20.75■□□□□ 0.91
IRF1-211ENST00000613424 PTPN12Q05209 780 aaKnown RBP20.75■□□□□ 0.91
IRF1-211ENST00000613424 WASHC4Q2M389 1173 aa20.75■□□□□ 0.91
IRF1-211ENST00000613424 LARGE2Q8N3Y3 721 aa20.75■□□□□ 0.91
IRF1-211ENST00000613424 GPR101Q96P66 508 aaPredicted RBP20.75■□□□□ 0.91
IRF1-211ENST00000613424 C1orf115Q9H7X2 142 aa20.75■□□□□ 0.91
IRF1-211ENST00000613424 RIPOR2Q9Y4F9 1068 aa20.75■□□□□ 0.91
IRF1-211ENST00000613424 RIMBP2O15034 1052 aa20.74■□□□□ 0.91
IRF1-211ENST00000613424 KIAA2012Q0VF49 1180 aa20.74■□□□□ 0.91
IRF1-211ENST00000613424 MTX1Q13505 466 aa20.74■□□□□ 0.91
IRF1-211ENST00000613424 LTBP1Q14766 1721 aa20.74■□□□□ 0.91
IRF1-211ENST00000613424 LRRC24Q50LG9 513 aa20.74■□□□□ 0.91
IRF1-211ENST00000613424 HELBQ8NG08 1087 aaPredicted RBP20.74■□□□□ 0.91
IRF1-211ENST00000613424 JDP2Q8WYK2 163 aa20.74■□□□□ 0.91
IRF1-211ENST00000613424 EYA3Q99504 573 aa20.74■□□□□ 0.91
IRF1-211ENST00000613424 ZC3H4Q9UPT8 1303 aaKnown RBP20.74■□□□□ 0.91
IRF1-211ENST00000613424 SRGAP3O43295 1099 aa20.73■□□□□ 0.91
IRF1-211ENST00000613424 TAF5LO75529 589 aa20.73■□□□□ 0.91
IRF1-211ENST00000613424 LEMD3Q9Y2U8 911 aa20.73■□□□□ 0.91
IRF1-211ENST00000613424 ZC3H12CQ9C0D7 883 aaKnown RBP20.72■□□□□ 0.91
IRF1-211ENST00000613424 COL4A5P29400 1685 aa20.72■□□□□ 0.91
IRF1-211ENST00000613424 PNMA6EA0A0J9YXQ4 647 aa20.71■□□□□ 0.91
IRF1-211ENST00000613424 FZD9O00144 591 aa20.71■□□□□ 0.91
IRF1-211ENST00000613424 ATP8B2P98198 1209 aa20.71■□□□□ 0.91
IRF1-211ENST00000613424 NIM1KQ8IY84 436 aa20.71■□□□□ 0.91
IRF1-211ENST00000613424 ZNF784Q8NCA9 323 aaPredicted RBP20.71■□□□□ 0.91
IRF1-211ENST00000613424 ZBTB40Q9NUA8 1239 aa20.71■□□□□ 0.91
IRF1-211ENST00000613424 PA2G4Q9UQ80 394 aaKnown RBP20.71■□□□□ 0.91
IRF1-211ENST00000613424 TIAM2Q8IVF5 1701 aa20.7■□□□□ 0.9
IRF1-211ENST00000613424 SNAP23O00161 211 aa20.7■□□□□ 0.9
IRF1-211ENST00000613424 EYA2O00167 538 aa20.7■□□□□ 0.9
IRF1-211ENST00000613424 ZNF526Q8TF50 670 aaPredicted RBP20.7■□□□□ 0.9
IRF1-211ENST00000613424 SIL1Q9H173 461 aa20.7■□□□□ 0.9
IRF1-211ENST00000613424 CHMP4BQ9H444 224 aaKnown RBP20.7■□□□□ 0.9
IRF1-211ENST00000613424 COPRSQ9NQ92 184 aa20.7■□□□□ 0.9
IRF1-211ENST00000613424 ZNF804BA4D1E1 1349 aa20.7■□□□□ 0.9
IRF1-211ENST00000613424 MROH5Q6ZUA9 1318 aa20.7■□□□□ 0.9
IRF1-211ENST00000613424 GLTPD2A6NH11 291 aa20.69■□□□□ 0.9
IRF1-211ENST00000613424 KCNJ4P48050 445 aa20.69■□□□□ 0.9
IRF1-211ENST00000613424 DPY19L2Q6NUT2 758 aa20.69■□□□□ 0.9
IRF1-211ENST00000613424 FBXO3Q9UK99 471 aa20.69■□□□□ 0.9
IRF1-211ENST00000613424 DOK7Q18PE1 504 aa20.68■□□□□ 0.9
IRF1-211ENST00000613424 METTL24Q5JXM2 366 aa20.68■□□□□ 0.9
IRF1-211ENST00000613424 ATG9AQ7Z3C6 839 aa20.68■□□□□ 0.9
IRF1-211ENST00000613424 ZNRF3Q9ULT6 936 aa20.68■□□□□ 0.9
IRF1-211ENST00000613424 SUPT16HQ9Y5B9 1047 aaKnown RBP20.68■□□□□ 0.9
IRF1-211ENST00000613424 CIAO1O76071 339 aa20.67■□□□□ 0.9
IRF1-211ENST00000613424 EIF6P56537 245 aaKnown RBP20.67■□□□□ 0.9
IRF1-211ENST00000613424 POLA2Q14181 598 aa20.67■□□□□ 0.9
IRF1-211ENST00000613424 CEP85Q6P2H3 762 aa20.67■□□□□ 0.9
IRF1-211ENST00000613424 TXNRD3Q86VQ6 643 aa20.67■□□□□ 0.9
IRF1-211ENST00000613424 SSH3Q8TE77 659 aa20.67■□□□□ 0.9
IRF1-211ENST00000613424 DBNDD1Q9H9R9 158 aa20.67■□□□□ 0.9
IRF1-211ENST00000613424 ZNF541Q9H0D2 1346 aa20.67■□□□□ 0.9
IRF1-211ENST00000613424 YDJCA8MPS7 323 aa20.66■□□□□ 0.9
IRF1-211ENST00000613424 G3V3G9 751 aa20.66■□□□□ 0.9
IRF1-211ENST00000613424 DDNO94850 711 aaPredicted RBP20.66■□□□□ 0.9
IRF1-211ENST00000613424 PDE8BO95263 885 aa20.66■□□□□ 0.9
IRF1-211ENST00000613424 KLRK1P26718 216 aa20.66■□□□□ 0.9
IRF1-211ENST00000613424 DCAF8Q5TAQ9 597 aa20.66■□□□□ 0.9
IRF1-211ENST00000613424 VGLL2Q8N8G2 317 aa20.66■□□□□ 0.9
IRF1-211ENST00000613424 MED23Q9ULK4 1368 aa20.66■□□□□ 0.9
IRF1-211ENST00000613424 A0A1B0GUL6 1792 aa20.66■□□□□ 0.9
IRF1-211ENST00000613424 KDM2BQ8NHM5 1336 aa20.65■□□□□ 0.9
IRF1-211ENST00000613424 ECE2O60344 883 aa20.65■□□□□ 0.9
IRF1-211ENST00000613424 IL15P40933 162 aaPredicted RBP20.65■□□□□ 0.9
IRF1-211ENST00000613424 UBE4AQ14139 1066 aa20.65■□□□□ 0.9
IRF1-211ENST00000613424 GPBP1L1Q9HC44 474 aaPredicted RBP20.65■□□□□ 0.9
IRF1-211ENST00000613424 IRS2Q9Y4H2 1338 aa20.64■□□□□ 0.89
IRF1-211ENST00000613424 CXCL9Q07325 125 aa20.64■□□□□ 0.89
IRF1-211ENST00000613424 C15orf52Q6ZUT6 534 aaKnown RBP20.64■□□□□ 0.89
IRF1-211ENST00000613424 RPAP2Q8IXW5 612 aaPredicted RBP20.64■□□□□ 0.89
IRF1-211ENST00000613424 RAD17O75943 681 aa20.63■□□□□ 0.89
IRF1-211ENST00000613424 KCNQ5Q9NR82 932 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms