RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 FKBP4Q02790 459 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCL3L3-201ENST00000612839 FAM161AQ3B820 660 aa14.28□□□□□ -0.12
CCL3L3-201ENST00000612839 C9orf131Q5VYM1 1079 aa14.28□□□□□ -0.12
CCL3L3-201ENST00000612839 INTS3Q68E01 1043 aaKnown RBP14.28□□□□□ -0.12
CCL3L3-201ENST00000612839 TMC4Q7Z404 712 aa14.28□□□□□ -0.12
CCL3L3-201ENST00000612839 CLUAP1Q96AJ1 413 aa14.28□□□□□ -0.12
CCL3L3-201ENST00000612839 SUCLG2Q96I99 432 aa14.28□□□□□ -0.12
CCL3L3-201ENST00000612839 LTBP1Q14766 1721 aa14.27□□□□□ -0.12
CCL3L3-201ENST00000612839 TIAM2Q8IVF5 1701 aa14.27□□□□□ -0.12
CCL3L3-201ENST00000612839 ITGA6P23229 1130 aa14.27□□□□□ -0.12
CCL3L3-201ENST00000612839 GRIPAP1Q4V328 841 aa14.27□□□□□ -0.12
CCL3L3-201ENST00000612839 PSMD1Q99460 953 aa14.27□□□□□ -0.12
CCL3L3-201ENST00000612839 RNF181Q9P0P0 153 aa14.27□□□□□ -0.12
CCL3L3-201ENST00000612839 RCAN3Q9UKA8 241 aa14.27□□□□□ -0.12
CCL3L3-201ENST00000612839 LMBR1LQ6UX01 489 aa14.26□□□□□ -0.13
CCL3L3-201ENST00000612839 CDC5LQ99459 802 aaKnown RBP14.26□□□□□ -0.13
CCL3L3-201ENST00000612839 TMX4Q9H1E5 349 aaPredicted RBP14.26□□□□□ -0.13
CCL3L3-201ENST00000612839 DUOX1Q9NRD9 1551 aa14.26□□□□□ -0.13
CCL3L3-201ENST00000612839 ANKRD18AQ8IVF6 992 aa14.25□□□□□ -0.13
CCL3L3-201ENST00000612839 BICC1Q9H694 974 aaKnown RBP14.25□□□□□ -0.13
CCL3L3-201ENST00000612839 ZNF277Q9NRM2 450 aaPredicted RBP14.25□□□□□ -0.13
CCL3L3-201ENST00000612839 RABL6Q3YEC7 729 aaPredicted RBP14.25□□□□□ -0.13
CCL3L3-201ENST00000612839 MPNDQ8N594 471 aa14.25□□□□□ -0.13
CCL3L3-201ENST00000612839 TMEM57Q8N5G2 664 aa14.25□□□□□ -0.13
CCL3L3-201ENST00000612839 MEIS3Q99687 375 aa14.25□□□□□ -0.13
CCL3L3-201ENST00000612839 RLBP1P12271 317 aa14.24□□□□□ -0.13
CCL3L3-201ENST00000612839 IFIT5Q13325 482 aaKnown RBP14.24□□□□□ -0.13
CCL3L3-201ENST00000612839 DPP8Q6V1X1 898 aaPredicted RBP14.24□□□□□ -0.13
CCL3L3-201ENST00000612839 ANKRD44Q8N8A2 993 aa14.24□□□□□ -0.13
CCL3L3-201ENST00000612839 RTFDC1Q9BY42 306 aaPredicted RBP14.24□□□□□ -0.13
CCL3L3-201ENST00000612839 BSDC1Q9NW68 430 aaPredicted RBP14.24□□□□□ -0.13
CCL3L3-201ENST00000612839 NSFL1CQ9UNZ2 370 aaKnown RBP14.24□□□□□ -0.13
CCL3L3-201ENST00000612839 CHMP3Q9Y3E7 222 aa14.24□□□□□ -0.13
CCL3L3-201ENST00000612839 COL4A5P29400 1685 aa14.23□□□□□ -0.13
CCL3L3-201ENST00000612839 ANKRD18BA2A2Z9 1011 aa14.23□□□□□ -0.13
CCL3L3-201ENST00000612839 UBTFL1P0CB47 393 aaPredicted RBP14.23□□□□□ -0.13
CCL3L3-201ENST00000612839 IARSP41252 1262 aaKnown RBP14.23□□□□□ -0.13
CCL3L3-201ENST00000612839 GPSM2P81274 684 aa14.23□□□□□ -0.13
CCL3L3-201ENST00000612839 DZIP1LQ8IYY4 767 aaKnown RBP14.23□□□□□ -0.13
CCL3L3-201ENST00000612839 ZNF784Q8NCA9 323 aaPredicted RBP14.23□□□□□ -0.13
CCL3L3-201ENST00000612839 ZC3H4Q9UPT8 1303 aaKnown RBP14.22□□□□□ -0.13
CCL3L3-201ENST00000612839 GALR2O43603 387 aaPredicted RBP14.22□□□□□ -0.13
CCL3L3-201ENST00000612839 IGHMBP2P38935 993 aaKnown RBP14.22□□□□□ -0.13
CCL3L3-201ENST00000612839 CCDC57Q2TAC2 916 aa14.22□□□□□ -0.13
CCL3L3-201ENST00000612839 FTSJ3Q8IY81 847 aaKnown RBP14.22□□□□□ -0.13
CCL3L3-201ENST00000612839 A0A1B0GUL6 1792 aa14.21□□□□□ -0.13
CCL3L3-201ENST00000612839 PLIN1O60240 522 aa14.21□□□□□ -0.13
CCL3L3-201ENST00000612839 MNX1P50219 401 aaPredicted RBP14.21□□□□□ -0.13
CCL3L3-201ENST00000612839 MPHOSPH8Q99549 860 aa14.21□□□□□ -0.13
CCL3L3-201ENST00000612839 PODXL2Q9NZ53 605 aa14.21□□□□□ -0.13
CCL3L3-201ENST00000612839 POLLQ9UGP5 575 aa14.21□□□□□ -0.13
CCL3L3-201ENST00000612839 MINPP1Q9UNW1 487 aa14.21□□□□□ -0.13
CCL3L3-201ENST00000612839 GNAI3P08754 354 aa14.2□□□□□ -0.14
CCL3L3-201ENST00000612839 AOC3Q16853 763 aa14.2□□□□□ -0.14
CCL3L3-201ENST00000612839 SUPT20HQ8NEM7 779 aa14.2□□□□□ -0.14
CCL3L3-201ENST00000612839 TBC1D16Q8TBP0 767 aa14.2□□□□□ -0.14
CCL3L3-201ENST00000612839 PANK1Q8TE04 598 aa14.2□□□□□ -0.14
CCL3L3-201ENST00000612839 ZNF594Q96JF6 807 aaPredicted RBP14.2□□□□□ -0.14
CCL3L3-201ENST00000612839 ANKIB1Q9P2G1 1089 aa14.2□□□□□ -0.14
CCL3L3-201ENST00000612839 LRRFIP2Q9Y608 721 aaKnown RBP14.2□□□□□ -0.14
CCL3L3-201ENST00000612839 PPIP5K2O43314 1243 aa14.19□□□□□ -0.14
CCL3L3-201ENST00000612839 LARGE2Q8N3Y3 721 aa14.19□□□□□ -0.14
CCL3L3-201ENST00000612839 ZNF526Q8TF50 670 aaPredicted RBP14.19□□□□□ -0.14
CCL3L3-201ENST00000612839 VPS33BQ9H267 617 aa14.19□□□□□ -0.14
CCL3L3-201ENST00000612839 XDHP47989 1333 aa14.19□□□□□ -0.14
CCL3L3-201ENST00000612839 WTIPA6NIX2 430 aaPredicted RBP14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 C6orf229H3BNL8 230 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 KIAA2012Q0VF49 1180 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 TAF7LQ5H9L4 462 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 ITPRIPQ8IWB1 547 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 GPR101Q96P66 508 aaPredicted RBP14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 HDAC5Q9UQL6 1122 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 GLTPD2A6NH11 291 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 FZD9O00144 591 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 ZBTB7BO15156 539 aaPredicted RBP14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 UFL1O94874 794 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 RFX5P48382 616 aaPredicted RBP14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 CHRNDQ07001 517 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 WASHC4Q2M389 1173 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 LDHAL6AQ6ZMR3 332 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 KLHDC4Q8TBB5 520 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 JDP2Q8WYK2 163 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 GGA1Q9UJY5 639 aa14.18□□□□□ -0.14
CCL3L3-201ENST00000612839 MS4A1P11836 297 aa14.17□□□□□ -0.14
CCL3L3-201ENST00000612839 PHF12Q96QT6 1004 aa14.17□□□□□ -0.14
CCL3L3-201ENST00000612839 PUS3Q9BZE2 481 aaKnown RBP14.17□□□□□ -0.14
CCL3L3-201ENST00000612839 ZNF541Q9H0D2 1346 aa14.17□□□□□ -0.14
CCL3L3-201ENST00000612839 RIMBP2O15034 1052 aa14.16□□□□□ -0.14
CCL3L3-201ENST00000612839 GNAI2P04899 355 aa14.16□□□□□ -0.14
CCL3L3-201ENST00000612839 ATP2B4P23634 1241 aa14.16□□□□□ -0.14
CCL3L3-201ENST00000612839 NIM1KQ8IY84 436 aa14.16□□□□□ -0.14
CCL3L3-201ENST00000612839 EYA3Q99504 573 aa14.16□□□□□ -0.14
CCL3L3-201ENST00000612839 ANKRD2Q9GZV1 360 aa14.16□□□□□ -0.14
CCL3L3-201ENST00000612839 GPBP1L1Q9HC44 474 aaPredicted RBP14.16□□□□□ -0.14
CCL3L3-201ENST00000612839 CNNM1Q9NRU3 951 aa14.16□□□□□ -0.14
CCL3L3-201ENST00000612839 TAF5LO75529 589 aa14.15□□□□□ -0.14
CCL3L3-201ENST00000612839 DDNO94850 711 aaPredicted RBP14.15□□□□□ -0.14
CCL3L3-201ENST00000612839 PTPN12Q05209 780 aaKnown RBP14.15□□□□□ -0.14
CCL3L3-201ENST00000612839 MTX1Q13505 466 aa14.15□□□□□ -0.14
CCL3L3-201ENST00000612839 C20orf194Q5TEA3 1177 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms