RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 HTTP42858 3142 aa18.07■□□□□ 0.48
LINC00116-203ENST00000611969 C6orf229H3BNL8 230 aa18.07■□□□□ 0.48
LINC00116-203ENST00000611969 TCIRG1Q13488 830 aa18.07■□□□□ 0.48
LINC00116-203ENST00000611969 HSP90AB3PQ58FF7 597 aa18.07■□□□□ 0.48
LINC00116-203ENST00000611969 NEFMP07197 916 aa18.05■□□□□ 0.48
LINC00116-203ENST00000611969 ANGEL2Q5VTE6 544 aaKnown RBP18.05■□□□□ 0.48
LINC00116-203ENST00000611969 MOB2Q70IA6 237 aa18.05■□□□□ 0.48
LINC00116-203ENST00000611969 ZNF296Q8WUU4 475 aaPredicted RBP18.05■□□□□ 0.48
LINC00116-203ENST00000611969 MKI67P46013 3256 aaKnown RBP18.05■□□□□ 0.48
LINC00116-203ENST00000611969 ZNF609O15014 1411 aa18.05■□□□□ 0.48
LINC00116-203ENST00000611969 SPEF2Q9C093 1822 aa18.05■□□□□ 0.48
LINC00116-203ENST00000611969 TBC1D8O95759 1140 aa18.04■□□□□ 0.48
LINC00116-203ENST00000611969 TBC1D16Q8TBP0 767 aa18.04■□□□□ 0.48
LINC00116-203ENST00000611969 SCAF8Q9UPN6 1271 aaKnown RBP18.04■□□□□ 0.48
LINC00116-203ENST00000611969 RBBP6Q7Z6E9 1792 aaKnown RBP18.03■□□□□ 0.48
LINC00116-203ENST00000611969 VIL1P09327 827 aaKnown RBP18.02■□□□□ 0.48
LINC00116-203ENST00000611969 SF3B3Q15393 1217 aaKnown RBP18.02■□□□□ 0.48
LINC00116-203ENST00000611969 KRT24Q2M2I5 525 aa18.02■□□□□ 0.48
LINC00116-203ENST00000611969 FAM89AQ96GI7 184 aa18.02■□□□□ 0.48
LINC00116-203ENST00000611969 EYA3Q99504 573 aa18.02■□□□□ 0.48
LINC00116-203ENST00000611969 HDAC9Q9UKV0 1011 aa18.02■□□□□ 0.48
LINC00116-203ENST00000611969 MAPK8IP3Q9UPT6 1336 aa18.01■□□□□ 0.47
LINC00116-203ENST00000611969 ZNF280AP59817 542 aaPredicted RBP18.01■□□□□ 0.47
LINC00116-203ENST00000611969 SCARF1Q14162 830 aa18.01■□□□□ 0.47
LINC00116-203ENST00000611969 PKN2Q16513 984 aaKnown RBP18.01■□□□□ 0.47
LINC00116-203ENST00000611969 RTL5Q5HYW3 569 aaPredicted RBP18.01■□□□□ 0.47
LINC00116-203ENST00000611969 REM2Q8IYK8 340 aaPredicted RBP18.01■□□□□ 0.47
LINC00116-203ENST00000611969 LAMB1P07942 1786 aa18■□□□□ 0.47
LINC00116-203ENST00000611969 ATP5J2-PTCD1G3V325 749 aa17.99■□□□□ 0.47
LINC00116-203ENST00000611969 FKBP1BP68106 108 aa17.99■□□□□ 0.47
LINC00116-203ENST00000611969 PRAMEF18Q5VWM3 479 aa17.99■□□□□ 0.47
LINC00116-203ENST00000611969 ISCA1Q9BUE6 129 aa17.99■□□□□ 0.47
LINC00116-203ENST00000611969 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
LINC00116-203ENST00000611969 CHPF2Q9P2E5 772 aa17.99■□□□□ 0.47
LINC00116-203ENST00000611969 CENPFP49454 3210 aa17.98■□□□□ 0.47
LINC00116-203ENST00000611969 UBE2Q2LH0YL09 131 aa17.98■□□□□ 0.47
LINC00116-203ENST00000611969 GPR25O00155 361 aa17.98■□□□□ 0.47
LINC00116-203ENST00000611969 UFL1O94874 794 aa17.98■□□□□ 0.47
LINC00116-203ENST00000611969 MKRN3Q13064 507 aaKnown RBP17.98■□□□□ 0.47
LINC00116-203ENST00000611969 RSBN1LQ6PCB5 846 aaPredicted RBP17.98■□□□□ 0.47
LINC00116-203ENST00000611969 FBXO46Q6PJ61 603 aaPredicted RBP17.98■□□□□ 0.47
LINC00116-203ENST00000611969 RALBP1Q15311 655 aa17.97■□□□□ 0.47
LINC00116-203ENST00000611969 PLBD2Q8NHP8 589 aa17.97■□□□□ 0.47
LINC00116-203ENST00000611969 GMLQ99445 158 aa17.97■□□□□ 0.47
LINC00116-203ENST00000611969 ZC3H12CQ9C0D7 883 aaKnown RBP17.97■□□□□ 0.47
LINC00116-203ENST00000611969 R3HDMLQ9H3Y0 253 aa17.97■□□□□ 0.47
LINC00116-203ENST00000611969 MYOZ2Q9NPC6 264 aa17.97■□□□□ 0.47
LINC00116-203ENST00000611969 SEC31BQ9NQW1 1179 aa17.97■□□□□ 0.47
LINC00116-203ENST00000611969 PITPNM2Q9BZ72 1349 aa17.97■□□□□ 0.47
LINC00116-203ENST00000611969 RPS8P62241 208 aaKnown RBP17.96■□□□□ 0.47
LINC00116-203ENST00000611969 AGBL3Q8NEM8 1001 aa17.96■□□□□ 0.47
LINC00116-203ENST00000611969 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
LINC00116-203ENST00000611969 IRS4O14654 1257 aaPredicted RBP17.95■□□□□ 0.46
LINC00116-203ENST00000611969 RIPK4P57078 832 aa17.95■□□□□ 0.46
LINC00116-203ENST00000611969 HABP4Q5JVS0 413 aaKnown RBP17.95■□□□□ 0.46
LINC00116-203ENST00000611969 G3V3G9 751 aa17.94■□□□□ 0.46
LINC00116-203ENST00000611969 USP17L8P0C7I0 530 aa17.94■□□□□ 0.46
LINC00116-203ENST00000611969 TM4SF4P48230 202 aa17.94■□□□□ 0.46
LINC00116-203ENST00000611969 NOM1Q5C9Z4 860 aaKnown RBP17.94■□□□□ 0.46
LINC00116-203ENST00000611969 DCAF8Q5TAQ9 597 aa17.94■□□□□ 0.46
LINC00116-203ENST00000611969 GCC1Q96CN9 775 aa17.94■□□□□ 0.46
LINC00116-203ENST00000611969 BABAM1Q9NWV8 329 aa17.94■□□□□ 0.46
LINC00116-203ENST00000611969 ANKIB1Q9P2G1 1089 aa17.94■□□□□ 0.46
LINC00116-203ENST00000611969 GGA1Q9UJY5 639 aa17.94■□□□□ 0.46
LINC00116-203ENST00000611969 BRCA2P51587 3418 aa17.94■□□□□ 0.46
LINC00116-203ENST00000611969 TTLL12Q14166 644 aaPredicted RBP17.93■□□□□ 0.46
LINC00116-203ENST00000611969 NBPF9Q3BBW0 867 aa17.93■□□□□ 0.46
LINC00116-203ENST00000611969 ANKRD13DQ6ZTN6 518 aa17.93■□□□□ 0.46
LINC00116-203ENST00000611969 MYH3P11055 1940 aa17.93■□□□□ 0.46
LINC00116-203ENST00000611969 POTEFA5A3E0 1075 aa17.92■□□□□ 0.46
LINC00116-203ENST00000611969 HDGFL1Q5TGJ6 251 aa17.92■□□□□ 0.46
LINC00116-203ENST00000611969 MXD3Q9BW11 206 aa17.92■□□□□ 0.46
LINC00116-203ENST00000611969 ECM29Q5VYK3 1845 aa17.91■□□□□ 0.46
LINC00116-203ENST00000611969 WTIPA6NIX2 430 aaPredicted RBP17.91■□□□□ 0.46
LINC00116-203ENST00000611969 FKTNO75072 461 aa17.91■□□□□ 0.46
LINC00116-203ENST00000611969 USP17L3A6NCW0 530 aa17.9■□□□□ 0.46
LINC00116-203ENST00000611969 USP17L4A6NCW7 530 aa17.9■□□□□ 0.46
LINC00116-203ENST00000611969 TMPOP42166 694 aaKnown RBP17.9■□□□□ 0.46
LINC00116-203ENST00000611969 DDX10Q13206 875 aaKnown RBP17.9■□□□□ 0.46
LINC00116-203ENST00000611969 USP17L1Q7RTZ2 530 aa17.9■□□□□ 0.46
LINC00116-203ENST00000611969 CCDC85AQ96PX6 553 aaPredicted RBP17.9■□□□□ 0.46
LINC00116-203ENST00000611969 CFHR5Q9BXR6 569 aa17.9■□□□□ 0.46
LINC00116-203ENST00000611969 PTPN12Q05209 780 aaKnown RBP17.89■□□□□ 0.45
LINC00116-203ENST00000611969 SREBF2Q12772 1141 aa17.89■□□□□ 0.45
LINC00116-203ENST00000611969 OTOFQ9HC10 1997 aa17.88■□□□□ 0.45
LINC00116-203ENST00000611969 CHL1O00533 1208 aa17.88■□□□□ 0.45
LINC00116-203ENST00000611969 SASH1O94885 1247 aa17.88■□□□□ 0.45
LINC00116-203ENST00000611969 PRKG1Q13976 671 aa17.88■□□□□ 0.45
LINC00116-203ENST00000611969 ZBTB38Q8NAP3 1195 aaPredicted RBP17.88■□□□□ 0.45
LINC00116-203ENST00000611969 FZD1Q9UP38 647 aa17.88■□□□□ 0.45
LINC00116-203ENST00000611969 XDHP47989 1333 aa17.88■□□□□ 0.45
LINC00116-203ENST00000611969 KIAA0100Q14667 2235 aaKnown RBP17.88■□□□□ 0.45
LINC00116-203ENST00000611969 SSC5DA1L4H1 1573 aa17.87■□□□□ 0.45
LINC00116-203ENST00000611969 WNT10BO00744 389 aa17.87■□□□□ 0.45
LINC00116-203ENST00000611969 LMOD3Q0VAK6 560 aa17.87■□□□□ 0.45
LINC00116-203ENST00000611969 TRIM28Q13263 835 aaKnown RBP17.87■□□□□ 0.45
LINC00116-203ENST00000611969 JARID2Q92833 1246 aaPredicted RBP17.87■□□□□ 0.45
LINC00116-203ENST00000611969 DBF4Q9UBU7 674 aaPredicted RBP17.87■□□□□ 0.45
LINC00116-203ENST00000611969 LAS1LQ9Y4W2 734 aaKnown RBP17.87■□□□□ 0.45
LINC00116-203ENST00000611969 TRIM17Q9Y577 477 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms