RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 LMBR1LQ6UX01 489 aa16.14■□□□□ 0.17
CD9-212ENST00000610354 TBC1D16Q8TBP0 767 aa16.14■□□□□ 0.17
CD9-212ENST00000610354 CDC5LQ99459 802 aaKnown RBP16.14■□□□□ 0.17
CD9-212ENST00000610354 USP44Q9H0E7 712 aa16.14■□□□□ 0.17
CD9-212ENST00000610354 JDP2Q8WYK2 163 aa16.13■□□□□ 0.17
CD9-212ENST00000610354 BSDC1Q9NW68 430 aaPredicted RBP16.13■□□□□ 0.17
CD9-212ENST00000610354 MINPP1Q9UNW1 487 aa16.13■□□□□ 0.17
CD9-212ENST00000610354 YDJCA8MPS7 323 aa16.12■□□□□ 0.17
CD9-212ENST00000610354 VEGFAP15692 232 aaPredicted RBP16.12■□□□□ 0.17
CD9-212ENST00000610354 L3MBTL3Q96JM7 780 aaPredicted RBP16.12■□□□□ 0.17
CD9-212ENST00000610354 A0A1B0GUL6 1792 aa16.11■□□□□ 0.17
CD9-212ENST00000610354 C6orf229H3BNL8 230 aa16.11■□□□□ 0.17
CD9-212ENST00000610354 RIMBP2O15034 1052 aa16.11■□□□□ 0.17
CD9-212ENST00000610354 TOMM70O94826 608 aa16.11■□□□□ 0.17
CD9-212ENST00000610354 NIM1KQ8IY84 436 aa16.11■□□□□ 0.17
CD9-212ENST00000610354 ANKRD44Q8N8A2 993 aa16.11■□□□□ 0.17
CD9-212ENST00000610354 API5Q9BZZ5 524 aaKnown RBP16.11■□□□□ 0.17
CD9-212ENST00000610354 SCN9AQ15858 1988 aa16.11■□□□□ 0.17
CD9-212ENST00000610354 SCN4AP35499 1836 aa16.11■□□□□ 0.17
CD9-212ENST00000610354 CXCL9Q07325 125 aa16.1■□□□□ 0.17
CD9-212ENST00000610354 WASHC4Q2M389 1173 aa16.1■□□□□ 0.17
CD9-212ENST00000610354 ARHGAP45Q92619 1136 aa16.1■□□□□ 0.17
CD9-212ENST00000610354 ZNF594Q96JF6 807 aaPredicted RBP16.1■□□□□ 0.17
CD9-212ENST00000610354 BICC1Q9H694 974 aaKnown RBP16.1■□□□□ 0.17
CD9-212ENST00000610354 ZNRF3Q9ULT6 936 aa16.1■□□□□ 0.17
CD9-212ENST00000610354 XDHP47989 1333 aa16.09■□□□□ 0.17
CD9-212ENST00000610354 ANKRD18BA2A2Z9 1011 aa16.09■□□□□ 0.17
CD9-212ENST00000610354 UFL1O94874 794 aa16.09■□□□□ 0.17
CD9-212ENST00000610354 POTEIP0CG38 1075 aa16.09■□□□□ 0.17
CD9-212ENST00000610354 POTEJP0CG39 1038 aa16.09■□□□□ 0.17
CD9-212ENST00000610354 IGHMBP2P38935 993 aaKnown RBP16.09■□□□□ 0.17
CD9-212ENST00000610354 EIF6P56537 245 aaKnown RBP16.09■□□□□ 0.17
CD9-212ENST00000610354 RABL6Q3YEC7 729 aaPredicted RBP16.09■□□□□ 0.17
CD9-212ENST00000610354 GPC2Q8N158 579 aa16.09■□□□□ 0.17
CD9-212ENST00000610354 KCNQ5Q9NR82 932 aa16.09■□□□□ 0.17
CD9-212ENST00000610354 ANKIB1Q9P2G1 1089 aa16.09■□□□□ 0.17
CD9-212ENST00000610354 GGA1Q9UJY5 639 aa16.09■□□□□ 0.17
CD9-212ENST00000610354 GJA3Q9Y6H8 435 aa16.09■□□□□ 0.17
CD9-212ENST00000610354 KIF16BQ96L93 1317 aa16.08■□□□□ 0.17
CD9-212ENST00000610354 ATP2B4P23634 1241 aa16.08■□□□□ 0.16
CD9-212ENST00000610354 CCT4P50991 539 aaKnown RBP16.08■□□□□ 0.16
CD9-212ENST00000610354 IFIT5Q13325 482 aaKnown RBP16.08■□□□□ 0.16
CD9-212ENST00000610354 DOK7Q18PE1 504 aa16.08■□□□□ 0.16
CD9-212ENST00000610354 RBM46Q8TBY0 533 aaKnown RBP16.08■□□□□ 0.16
CD9-212ENST00000610354 DBNDD1Q9H9R9 158 aa16.08■□□□□ 0.16
CD9-212ENST00000610354 CHMP3Q9Y3E7 222 aa16.08■□□□□ 0.16
CD9-212ENST00000610354 TRIM27P14373 513 aa16.07■□□□□ 0.16
CD9-212ENST00000610354 SCNN1DP51172 638 aa16.07■□□□□ 0.16
CD9-212ENST00000610354 INTS3Q68E01 1043 aaKnown RBP16.07■□□□□ 0.16
CD9-212ENST00000610354 FRAT1Q92837 279 aaPredicted RBP16.07■□□□□ 0.16
CD9-212ENST00000610354 EYA3Q99504 573 aa16.07■□□□□ 0.16
CD9-212ENST00000610354 TAF1DQ9H5J8 278 aaPredicted RBP16.07■□□□□ 0.16
CD9-212ENST00000610354 SNAP23O00161 211 aa16.06■□□□□ 0.16
CD9-212ENST00000610354 RAD17O75943 681 aa16.06■□□□□ 0.16
CD9-212ENST00000610354 CHRNDQ07001 517 aa16.06■□□□□ 0.16
CD9-212ENST00000610354 ATF7IPQ6VMQ6 1270 aa16.06■□□□□ 0.16
CD9-212ENST00000610354 TXNRD3Q86VQ6 643 aa16.06■□□□□ 0.16
CD9-212ENST00000610354 C16orf71Q8IYS4 520 aaPredicted RBP16.06■□□□□ 0.16
CD9-212ENST00000610354 MPHOSPH8Q99549 860 aa16.06■□□□□ 0.16
CD9-212ENST00000610354 PUS3Q9BZE2 481 aaKnown RBP16.06■□□□□ 0.16
CD9-212ENST00000610354 RTN4Q9NQC3 1192 aaKnown RBP16.06■□□□□ 0.16
CD9-212ENST00000610354 ECE2O60344 883 aa16.05■□□□□ 0.16
CD9-212ENST00000610354 KLRK1P26718 216 aa16.05■□□□□ 0.16
CD9-212ENST00000610354 EPS15P42566 896 aa16.05■□□□□ 0.16
CD9-212ENST00000610354 CCDC57Q2TAC2 916 aa16.05■□□□□ 0.16
CD9-212ENST00000610354 CIAPIN1Q6FI81 312 aa16.05■□□□□ 0.16
CD9-212ENST00000610354 HELBQ8NG08 1087 aaPredicted RBP16.05■□□□□ 0.16
CD9-212ENST00000610354 MEIS3Q99687 375 aa16.05■□□□□ 0.16
CD9-212ENST00000610354 ZC3H12CQ9C0D7 883 aaKnown RBP16.05■□□□□ 0.16
CD9-212ENST00000610354 HACL1Q9UJ83 578 aa16.05■□□□□ 0.16
CD9-212ENST00000610354 ADAMTSL1Q8N6G6 1762 aa16.05■□□□□ 0.16
CD9-212ENST00000610354 ZNF646O15015 1829 aaPredicted RBP16.05■□□□□ 0.16
CD9-212ENST00000610354 PSME4Q14997 1843 aa16.05■□□□□ 0.16
CD9-212ENST00000610354 IRS2Q9Y4H2 1338 aa16.05■□□□□ 0.16
CD9-212ENST00000610354 IPO8O15397 1037 aaKnown RBP16.04■□□□□ 0.16
CD9-212ENST00000610354 TAF5LO75529 589 aa16.04■□□□□ 0.16
CD9-212ENST00000610354 CLUAP1Q96AJ1 413 aa16.04■□□□□ 0.16
CD9-212ENST00000610354 MED23Q9ULK4 1368 aa16.03■□□□□ 0.16
CD9-212ENST00000610354 SHTN1A0MZ66 631 aa16.03■□□□□ 0.16
CD9-212ENST00000610354 IQCA1LA6NCM1 817 aa16.03■□□□□ 0.16
CD9-212ENST00000610354 PSMD14O00487 310 aa16.03■□□□□ 0.16
CD9-212ENST00000610354 EPHX2P34913 555 aa16.03■□□□□ 0.16
CD9-212ENST00000610354 RFX5P48382 616 aaPredicted RBP16.03■□□□□ 0.16
CD9-212ENST00000610354 GMPSP49915 693 aaPredicted RBP16.03■□□□□ 0.16
CD9-212ENST00000610354 ZKSCAN2Q63HK3 967 aa16.03■□□□□ 0.16
CD9-212ENST00000610354 LDHAL6AQ6ZMR3 332 aa16.03■□□□□ 0.16
CD9-212ENST00000610354 KLHDC4Q8TBB5 520 aa16.03■□□□□ 0.16
CD9-212ENST00000610354 ANKRD2Q9GZV1 360 aa16.03■□□□□ 0.16
CD9-212ENST00000610354 LEMD3Q9Y2U8 911 aa16.03■□□□□ 0.16
CD9-212ENST00000610354 ZNF804BA4D1E1 1349 aa16.03■□□□□ 0.16
CD9-212ENST00000610354 UBTFL1P0CB47 393 aaPredicted RBP16.02■□□□□ 0.16
CD9-212ENST00000610354 FSTL1Q12841 308 aa16.02■□□□□ 0.16
CD9-212ENST00000610354 GPRC5DQ9NZD1 345 aa16.02■□□□□ 0.16
CD9-212ENST00000610354 ZBTB12Q9Y330 459 aaPredicted RBP16.02■□□□□ 0.16
CD9-212ENST00000610354 RIPOR2Q9Y4F9 1068 aa16.02■□□□□ 0.16
CD9-212ENST00000610354 RLBP1P12271 317 aa16.01■□□□□ 0.15
CD9-212ENST00000610354 HSPA6P17066 643 aa16.01■□□□□ 0.15
CD9-212ENST00000610354 TNIP1Q15025 636 aa16.01■□□□□ 0.15
CD9-212ENST00000610354 LRRC24Q50LG9 513 aa16.01■□□□□ 0.15
CD9-212ENST00000610354 TAF7LQ5H9L4 462 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms