RNA–Protein interactions for RNA: ENST00000600962.5

SOX2-OT-235, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 472 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-235ENST00000600962 ZNF594Q96JF6 807 aaPredicted RBP17.06■□□□□ 0.32
SOX2-OT-235ENST00000600962 GPR101Q96P66 508 aaPredicted RBP17.06■□□□□ 0.32
SOX2-OT-235ENST00000600962 MPHOSPH8Q99549 860 aa17.06■□□□□ 0.32
SOX2-OT-235ENST00000600962 VPS33BQ9H267 617 aa17.06■□□□□ 0.32
SOX2-OT-235ENST00000600962 ANKIB1Q9P2G1 1089 aa17.06■□□□□ 0.32
SOX2-OT-235ENST00000600962 XDHP47989 1333 aa17.05■□□□□ 0.32
SOX2-OT-235ENST00000600962 WTIPA6NIX2 430 aaPredicted RBP17.05■□□□□ 0.32
SOX2-OT-235ENST00000600962 C6orf229H3BNL8 230 aa17.05■□□□□ 0.32
SOX2-OT-235ENST00000600962 UFL1O94874 794 aa17.05■□□□□ 0.32
SOX2-OT-235ENST00000600962 DZIP1LQ8IYY4 767 aaKnown RBP17.05■□□□□ 0.32
SOX2-OT-235ENST00000600962 JDP2Q8WYK2 163 aa17.05■□□□□ 0.32
SOX2-OT-235ENST00000600962 NMRK2Q9NPI5 230 aa17.05■□□□□ 0.32
SOX2-OT-235ENST00000600962 GGA1Q9UJY5 639 aa17.05■□□□□ 0.32
SOX2-OT-235ENST00000600962 KDM2BQ8NHM5 1336 aa17.04■□□□□ 0.32
SOX2-OT-235ENST00000600962 WASHC4Q2M389 1173 aa17.04■□□□□ 0.32
SOX2-OT-235ENST00000600962 FTSJ3Q8IY81 847 aaKnown RBP17.04■□□□□ 0.32
SOX2-OT-235ENST00000600962 NIM1KQ8IY84 436 aa17.04■□□□□ 0.32
SOX2-OT-235ENST00000600962 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
SOX2-OT-235ENST00000600962 DDNO94850 711 aaPredicted RBP17.03■□□□□ 0.32
SOX2-OT-235ENST00000600962 GNAI3P08754 354 aa17.03■□□□□ 0.32
SOX2-OT-235ENST00000600962 CHRNDQ07001 517 aa17.03■□□□□ 0.32
SOX2-OT-235ENST00000600962 TAF7LQ5H9L4 462 aa17.03■□□□□ 0.32
SOX2-OT-235ENST00000600962 DPY19L2Q6NUT2 758 aa17.03■□□□□ 0.32
SOX2-OT-235ENST00000600962 DICER1Q9UPY3 1922 aaKnown RBP17.03■□□□□ 0.32
SOX2-OT-235ENST00000600962 CCDC88AQ3V6T2 1871 aa17.02■□□□□ 0.32
SOX2-OT-235ENST00000600962 KIF3CO14782 793 aa17.02■□□□□ 0.32
SOX2-OT-235ENST00000600962 RIMBP2O15034 1052 aa17.02■□□□□ 0.32
SOX2-OT-235ENST00000600962 PLIN1O60240 522 aa17.02■□□□□ 0.32
SOX2-OT-235ENST00000600962 ATP2B4P23634 1241 aa17.02■□□□□ 0.32
SOX2-OT-235ENST00000600962 LDHAL6AQ6ZMR3 332 aa17.02■□□□□ 0.32
SOX2-OT-235ENST00000600962 PANK1Q8TE04 598 aa17.02■□□□□ 0.32
SOX2-OT-235ENST00000600962 EYA3Q99504 573 aa17.02■□□□□ 0.32
SOX2-OT-235ENST00000600962 PUS3Q9BZE2 481 aaKnown RBP17.02■□□□□ 0.32
SOX2-OT-235ENST00000600962 SPEF2Q9C093 1822 aa17.02■□□□□ 0.31
SOX2-OT-235ENST00000600962 RFX5P48382 616 aaPredicted RBP17.01■□□□□ 0.31
SOX2-OT-235ENST00000600962 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
SOX2-OT-235ENST00000600962 KLHDC4Q8TBB5 520 aa17.01■□□□□ 0.31
SOX2-OT-235ENST00000600962 RRAGCQ9HB90 399 aa17.01■□□□□ 0.31
SOX2-OT-235ENST00000600962 ZNRF3Q9ULT6 936 aa17.01■□□□□ 0.31
SOX2-OT-235ENST00000600962 YDJCA8MPS7 323 aa17■□□□□ 0.31
SOX2-OT-235ENST00000600962 POTECB2RU33 542 aa17■□□□□ 0.31
SOX2-OT-235ENST00000600962 EIF6P56537 245 aaKnown RBP17■□□□□ 0.31
SOX2-OT-235ENST00000600962 HELBQ8NG08 1087 aaPredicted RBP17■□□□□ 0.31
SOX2-OT-235ENST00000600962 ANKRD2Q9GZV1 360 aa17■□□□□ 0.31
SOX2-OT-235ENST00000600962 DBNDD1Q9H9R9 158 aa17■□□□□ 0.31
SOX2-OT-235ENST00000600962 CNNM1Q9NRU3 951 aa17■□□□□ 0.31
SOX2-OT-235ENST00000600962 HDAC5Q9UQL6 1122 aa17■□□□□ 0.31
SOX2-OT-235ENST00000600962 SNAP23O00161 211 aa16.99■□□□□ 0.31
SOX2-OT-235ENST00000600962 TAF5LO75529 589 aa16.99■□□□□ 0.31
SOX2-OT-235ENST00000600962 DOK7Q18PE1 504 aa16.99■□□□□ 0.31
SOX2-OT-235ENST00000600962 LRRC24Q50LG9 513 aa16.99■□□□□ 0.31
SOX2-OT-235ENST00000600962 L3MBTL3Q96JM7 780 aaPredicted RBP16.99■□□□□ 0.31
SOX2-OT-235ENST00000600962 ZC3H12CQ9C0D7 883 aaKnown RBP16.99■□□□□ 0.31
SOX2-OT-235ENST00000600962 LEMD3Q9Y2U8 911 aa16.99■□□□□ 0.31
SOX2-OT-235ENST00000600962 RIPOR2Q9Y4F9 1068 aa16.99■□□□□ 0.31
SOX2-OT-235ENST00000600962 MED23Q9ULK4 1368 aa16.99■□□□□ 0.31
SOX2-OT-235ENST00000600962 ZNF804BA4D1E1 1349 aa16.98■□□□□ 0.31
SOX2-OT-235ENST00000600962 ECE2O60344 883 aa16.98■□□□□ 0.31
SOX2-OT-235ENST00000600962 GNAI2P04899 355 aa16.98■□□□□ 0.31
SOX2-OT-235ENST00000600962 KLRK1P26718 216 aa16.98■□□□□ 0.31
SOX2-OT-235ENST00000600962 PTPN12Q05209 780 aaKnown RBP16.98■□□□□ 0.31
SOX2-OT-235ENST00000600962 CXCL9Q07325 125 aa16.98■□□□□ 0.31
SOX2-OT-235ENST00000600962 TXNRD3Q86VQ6 643 aa16.98■□□□□ 0.31
SOX2-OT-235ENST00000600962 GPC2Q8N158 579 aa16.98■□□□□ 0.31
SOX2-OT-235ENST00000600962 WDR90Q96KV7 1748 aa16.98■□□□□ 0.31
SOX2-OT-235ENST00000600962 ZBTB7BO15156 539 aaPredicted RBP16.97■□□□□ 0.31
SOX2-OT-235ENST00000600962 RAD17O75943 681 aa16.97■□□□□ 0.31
SOX2-OT-235ENST00000600962 MTX1Q13505 466 aa16.97■□□□□ 0.31
SOX2-OT-235ENST00000600962 KCNQ5Q9NR82 932 aa16.97■□□□□ 0.31
SOX2-OT-235ENST00000600962 GJA3Q9Y6H8 435 aa16.97■□□□□ 0.31
SOX2-OT-235ENST00000600962 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.31
SOX2-OT-235ENST00000600962 MS4A1P11836 297 aa16.96■□□□□ 0.31
SOX2-OT-235ENST00000600962 VEGFAP15692 232 aaPredicted RBP16.96■□□□□ 0.31
SOX2-OT-235ENST00000600962 KCNJ4P48050 445 aa16.96■□□□□ 0.31
SOX2-OT-235ENST00000600962 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
SOX2-OT-235ENST00000600962 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
SOX2-OT-235ENST00000600962 CIAPIN1Q6FI81 312 aa16.95■□□□□ 0.3
SOX2-OT-235ENST00000600962 VGLL2Q8N8G2 317 aa16.95■□□□□ 0.3
SOX2-OT-235ENST00000600962 C1orf115Q9H7X2 142 aa16.95■□□□□ 0.3
SOX2-OT-235ENST00000600962 PA2G4Q9UQ80 394 aaKnown RBP16.95■□□□□ 0.3
SOX2-OT-235ENST00000600962 COG6Q9Y2V7 657 aa16.95■□□□□ 0.3
SOX2-OT-235ENST00000600962 MROH5Q6ZUA9 1318 aa16.95■□□□□ 0.3
SOX2-OT-235ENST00000600962 PNMA6EA0A0J9YXQ4 647 aa16.94■□□□□ 0.3
SOX2-OT-235ENST00000600962 EYA2O00167 538 aa16.94■□□□□ 0.3
SOX2-OT-235ENST00000600962 SCNN1DP51172 638 aa16.94■□□□□ 0.3
SOX2-OT-235ENST00000600962 MVPQ14764 893 aaKnown RBP16.94■□□□□ 0.3
SOX2-OT-235ENST00000600962 METTL24Q5JXM2 366 aa16.94■□□□□ 0.3
SOX2-OT-235ENST00000600962 C15orf52Q6ZUT6 534 aaKnown RBP16.94■□□□□ 0.3
SOX2-OT-235ENST00000600962 ATG9AQ7Z3C6 839 aa16.94■□□□□ 0.3
SOX2-OT-235ENST00000600962 SIL1Q9H173 461 aa16.94■□□□□ 0.3
SOX2-OT-235ENST00000600962 A0A1B0GUL6 1792 aa16.94■□□□□ 0.3
SOX2-OT-235ENST00000600962 G3V3G9 751 aa16.93■□□□□ 0.3
SOX2-OT-235ENST00000600962 PSMD14O00487 310 aa16.93■□□□□ 0.3
SOX2-OT-235ENST00000600962 TNIP1Q15025 636 aa16.93■□□□□ 0.3
SOX2-OT-235ENST00000600962 DCAF8Q5TAQ9 597 aa16.93■□□□□ 0.3
SOX2-OT-235ENST00000600962 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.93■□□□□ 0.3
SOX2-OT-235ENST00000600962 COPRSQ9NQ92 184 aa16.93■□□□□ 0.3
SOX2-OT-235ENST00000600962 IQCA1LA6NCM1 817 aa16.92■□□□□ 0.3
SOX2-OT-235ENST00000600962 CIAO1O76071 339 aa16.92■□□□□ 0.3
SOX2-OT-235ENST00000600962 GMPSP49915 693 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms