RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 DPP8Q6V1X1 898 aaPredicted RBP11.55□□□□□ -0.56
ZNF548-206ENST00000597047 RPAP2Q8IXW5 612 aaPredicted RBP11.55□□□□□ -0.56
ZNF548-206ENST00000597047 SP8Q8IXZ3 490 aa11.55□□□□□ -0.56
ZNF548-206ENST00000597047 MPNDQ8N594 471 aa11.55□□□□□ -0.56
ZNF548-206ENST00000597047 GPR101Q96P66 508 aaPredicted RBP11.55□□□□□ -0.56
ZNF548-206ENST00000597047 MINPP1Q9UNW1 487 aa11.55□□□□□ -0.56
ZNF548-206ENST00000597047 ATP6V0A2Q9Y487 856 aa11.55□□□□□ -0.56
ZNF548-206ENST00000597047 PCDHB15Q9Y5E8 787 aa11.55□□□□□ -0.56
ZNF548-206ENST00000597047 G3V3G9 751 aa11.54□□□□□ -0.56
ZNF548-206ENST00000597047 RFX5P48382 616 aaPredicted RBP11.54□□□□□ -0.56
ZNF548-206ENST00000597047 RASSF7Q02833 373 aa11.54□□□□□ -0.56
ZNF548-206ENST00000597047 PTPN12Q05209 780 aaKnown RBP11.54□□□□□ -0.56
ZNF548-206ENST00000597047 CHRNDQ07001 517 aa11.54□□□□□ -0.56
ZNF548-206ENST00000597047 DCAF8Q5TAQ9 597 aa11.54□□□□□ -0.56
ZNF548-206ENST00000597047 IFFO2Q5TF58 517 aa11.54□□□□□ -0.56
ZNF548-206ENST00000597047 BSDC1Q9NW68 430 aaPredicted RBP11.54□□□□□ -0.56
ZNF548-206ENST00000597047 EXOC6BQ9Y2D4 811 aa11.54□□□□□ -0.56
ZNF548-206ENST00000597047 SNAP23O00161 211 aa11.53□□□□□ -0.56
ZNF548-206ENST00000597047 EYA2O00167 538 aa11.53□□□□□ -0.56
ZNF548-206ENST00000597047 UFL1O94874 794 aa11.53□□□□□ -0.56
ZNF548-206ENST00000597047 TMC4Q7Z404 712 aa11.53□□□□□ -0.56
ZNF548-206ENST00000597047 GTF3C3Q9Y5Q9 886 aa11.53□□□□□ -0.56
ZNF548-206ENST00000597047 BRCA1P38398 1863 aaKnown RBP11.53□□□□□ -0.56
ZNF548-206ENST00000597047 RTL9Q8NET4 1388 aa11.53□□□□□ -0.56
ZNF548-206ENST00000597047 WTIPA6NIX2 430 aaPredicted RBP11.52□□□□□ -0.57
ZNF548-206ENST00000597047 GRIN3BO60391 1043 aa11.52□□□□□ -0.57
ZNF548-206ENST00000597047 TFCP2Q12800 502 aa11.52□□□□□ -0.57
ZNF548-206ENST00000597047 POLA2Q14181 598 aa11.52□□□□□ -0.57
ZNF548-206ENST00000597047 SOGA3Q5TF21 947 aa11.52□□□□□ -0.57
ZNF548-206ENST00000597047 SIRT2Q8IXJ6 389 aa11.52□□□□□ -0.57
ZNF548-206ENST00000597047 RTKN2Q8IZC4 609 aa11.52□□□□□ -0.57
ZNF548-206ENST00000597047 SSH3Q8TE77 659 aa11.52□□□□□ -0.57
ZNF548-206ENST00000597047 C7orf43Q8WVR3 580 aa11.52□□□□□ -0.57
ZNF548-206ENST00000597047 ANKRD2Q9GZV1 360 aa11.52□□□□□ -0.57
ZNF548-206ENST00000597047 ZNF277Q9NRM2 450 aaPredicted RBP11.52□□□□□ -0.57
ZNF548-206ENST00000597047 CEP126Q9P2H0 1117 aa11.52□□□□□ -0.57
ZNF548-206ENST00000597047 GGA1Q9UJY5 639 aa11.52□□□□□ -0.57
ZNF548-206ENST00000597047 IL15P40933 162 aaPredicted RBP11.51□□□□□ -0.57
ZNF548-206ENST00000597047 MTX1Q13505 466 aa11.51□□□□□ -0.57
ZNF548-206ENST00000597047 CC2D2BQ6DHV5 1058 aa11.51□□□□□ -0.57
ZNF548-206ENST00000597047 B4GALNT3Q6L9W6 998 aa11.51□□□□□ -0.57
ZNF548-206ENST00000597047 NEUROD6Q96NK8 337 aa11.51□□□□□ -0.57
ZNF548-206ENST00000597047 TAOK3Q9H2K8 898 aa11.51□□□□□ -0.57
ZNF548-206ENST00000597047 RWDD1Q9H446 243 aaPredicted RBP11.51□□□□□ -0.57
ZNF548-206ENST00000597047 COPRSQ9NQ92 184 aa11.51□□□□□ -0.57
ZNF548-206ENST00000597047 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
ZNF548-206ENST00000597047 RIPOR2Q9Y4F9 1068 aa11.51□□□□□ -0.57
ZNF548-206ENST00000597047 PPIP5K2O43314 1243 aa11.5□□□□□ -0.57
ZNF548-206ENST00000597047 SMARCA5O60264 1052 aaPredicted RBP11.5□□□□□ -0.57
ZNF548-206ENST00000597047 ATP2B4P23634 1241 aa11.5□□□□□ -0.57
ZNF548-206ENST00000597047 FKBP4Q02790 459 aaKnown RBP eCLIP11.5□□□□□ -0.57
ZNF548-206ENST00000597047 DOK7Q18PE1 504 aa11.5□□□□□ -0.57
ZNF548-206ENST00000597047 ATG9AQ7Z3C6 839 aa11.5□□□□□ -0.57
ZNF548-206ENST00000597047 SUPT20HQ8NEM7 779 aa11.5□□□□□ -0.57
ZNF548-206ENST00000597047 TBC1D16Q8TBP0 767 aa11.5□□□□□ -0.57
ZNF548-206ENST00000597047 FBXW7Q969H0 707 aa11.5□□□□□ -0.57
ZNF548-206ENST00000597047 ZC3H12CQ9C0D7 883 aaKnown RBP11.5□□□□□ -0.57
ZNF548-206ENST00000597047 IL1RAPL2Q9NP60 686 aa11.5□□□□□ -0.57
ZNF548-206ENST00000597047 POLLQ9UGP5 575 aa11.5□□□□□ -0.57
ZNF548-206ENST00000597047 ARFGEF1Q9Y6D6 1849 aa11.5□□□□□ -0.57
ZNF548-206ENST00000597047 XDHP47989 1333 aa11.5□□□□□ -0.57
ZNF548-206ENST00000597047 MROH5Q6ZUA9 1318 aa11.5□□□□□ -0.57
ZNF548-206ENST00000597047 CCDC88AQ3V6T2 1871 aa11.49□□□□□ -0.57
ZNF548-206ENST00000597047 NFKBIEO00221 500 aa11.49□□□□□ -0.57
ZNF548-206ENST00000597047 IGHDP01880 384 aa11.49□□□□□ -0.57
ZNF548-206ENST00000597047 TIMM10P62072 90 aa11.49□□□□□ -0.57
ZNF548-206ENST00000597047 AOC3Q16853 763 aa11.49□□□□□ -0.57
ZNF548-206ENST00000597047 WASHC4Q2M389 1173 aa11.49□□□□□ -0.57
ZNF548-206ENST00000597047 GORABQ5T7V8 394 aa11.49□□□□□ -0.57
ZNF548-206ENST00000597047 LARGE2Q8N3Y3 721 aa11.49□□□□□ -0.57
ZNF548-206ENST00000597047 EYA3Q99504 573 aa11.49□□□□□ -0.57
ZNF548-206ENST00000597047 ZNF804BA4D1E1 1349 aa11.49□□□□□ -0.57
ZNF548-206ENST00000597047 CIAO1O76071 339 aa11.48□□□□□ -0.57
ZNF548-206ENST00000597047 SASH1O94885 1247 aa11.48□□□□□ -0.57
ZNF548-206ENST00000597047 PDE8BO95263 885 aa11.48□□□□□ -0.57
ZNF548-206ENST00000597047 KLRK1P26718 216 aa11.48□□□□□ -0.57
ZNF548-206ENST00000597047 AAMPQ13685 434 aa11.48□□□□□ -0.57
ZNF548-206ENST00000597047 ATP2B3Q16720 1220 aa11.48□□□□□ -0.57
ZNF548-206ENST00000597047 HSP90AB4PQ58FF6 505 aa11.48□□□□□ -0.57
ZNF548-206ENST00000597047 C9orf131Q5VYM1 1079 aa11.48□□□□□ -0.57
ZNF548-206ENST00000597047 VPS37DQ86XT2 251 aa11.48□□□□□ -0.57
ZNF548-206ENST00000597047 CCDC136Q96JN2 1154 aa11.48□□□□□ -0.57
ZNF548-206ENST00000597047 RNF181Q9P0P0 153 aa11.48□□□□□ -0.57
ZNF548-206ENST00000597047 LEMD3Q9Y2U8 911 aa11.48□□□□□ -0.57
ZNF548-206ENST00000597047 FRAT2O75474 233 aaPredicted RBP11.47□□□□□ -0.57
ZNF548-206ENST00000597047 IFIT1P09914 478 aaKnown RBP11.47□□□□□ -0.57
ZNF548-206ENST00000597047 SLC5A1P13866 664 aa11.47□□□□□ -0.57
ZNF548-206ENST00000597047 IARSP41252 1262 aaKnown RBP11.47□□□□□ -0.57
ZNF548-206ENST00000597047 GYG1P46976 350 aa11.47□□□□□ -0.57
ZNF548-206ENST00000597047 GRIPAP1Q4V328 841 aa11.47□□□□□ -0.57
ZNF548-206ENST00000597047 ANKRD45Q5TZF3 282 aa11.47□□□□□ -0.57
ZNF548-206ENST00000597047 ERC1Q8IUD2 1116 aa11.47□□□□□ -0.57
ZNF548-206ENST00000597047 JDP2Q8WYK2 163 aa11.47□□□□□ -0.57
ZNF548-206ENST00000597047 CCDC8Q9H0W5 538 aaPredicted RBP11.47□□□□□ -0.57
ZNF548-206ENST00000597047 DBNDD1Q9H9R9 158 aa11.47□□□□□ -0.57
ZNF548-206ENST00000597047 IQSEC3Q9UPP2 1182 aaPredicted RBP11.47□□□□□ -0.57
ZNF548-206ENST00000597047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.47□□□□□ -0.57
ZNF548-206ENST00000597047 RAB11FIP3O75154 756 aa11.46□□□□□ -0.57
ZNF548-206ENST00000597047 LMNB1P20700 586 aa11.46□□□□□ -0.57
ZNF548-206ENST00000597047 ADORA1P30542 326 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms