RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 ATG9AQ7Z3C6 839 aa19.32■□□□□ 0.68
SMCO4-206ENST00000596676 CNNM1Q9NRU3 951 aa19.32■□□□□ 0.68
SMCO4-206ENST00000596676 RIPOR2Q9Y4F9 1068 aa19.32■□□□□ 0.68
SMCO4-206ENST00000596676 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.32■□□□□ 0.68
SMCO4-206ENST00000596676 ARHGAP27Q6ZUM4 889 aa19.31■□□□□ 0.68
SMCO4-206ENST00000596676 RPAP2Q8IXW5 612 aaPredicted RBP19.31■□□□□ 0.68
SMCO4-206ENST00000596676 COPRSQ9NQ92 184 aa19.31■□□□□ 0.68
SMCO4-206ENST00000596676 SNED1Q8TER0 1413 aa19.31■□□□□ 0.68
SMCO4-206ENST00000596676 NFKBIEO00221 500 aa19.3■□□□□ 0.68
SMCO4-206ENST00000596676 TAF5LO75529 589 aa19.3■□□□□ 0.68
SMCO4-206ENST00000596676 PRELPP51888 382 aa19.3■□□□□ 0.68
SMCO4-206ENST00000596676 CHRNDQ07001 517 aa19.3■□□□□ 0.68
SMCO4-206ENST00000596676 NSFL1CQ9UNZ2 370 aaKnown RBP19.3■□□□□ 0.68
SMCO4-206ENST00000596676 LRRC37AA6NMS7 1700 aa19.3■□□□□ 0.68
SMCO4-206ENST00000596676 EYA2O00167 538 aa19.29■□□□□ 0.68
SMCO4-206ENST00000596676 CCDC93Q567U6 631 aa19.29■□□□□ 0.68
SMCO4-206ENST00000596676 SURF6O75683 361 aaKnown RBP19.28■□□□□ 0.68
SMCO4-206ENST00000596676 MPNDQ8N594 471 aa19.28■□□□□ 0.68
SMCO4-206ENST00000596676 POLLQ9UGP5 575 aa19.28■□□□□ 0.68
SMCO4-206ENST00000596676 EXOC6BQ9Y2D4 811 aa19.28■□□□□ 0.68
SMCO4-206ENST00000596676 A0A1B0GUL6 1792 aa19.27■□□□□ 0.68
SMCO4-206ENST00000596676 FER1L6Q2WGJ9 1857 aa19.27■□□□□ 0.68
SMCO4-206ENST00000596676 DPP8Q6V1X1 898 aaPredicted RBP19.27■□□□□ 0.68
SMCO4-206ENST00000596676 TMC4Q7Z404 712 aa19.27■□□□□ 0.68
SMCO4-206ENST00000596676 ANKIB1Q9P2G1 1089 aa19.27■□□□□ 0.68
SMCO4-206ENST00000596676 DUOX1Q9NRD9 1551 aa19.27■□□□□ 0.67
SMCO4-206ENST00000596676 APBB1O00213 710 aa19.26■□□□□ 0.67
SMCO4-206ENST00000596676 SASH1O94885 1247 aa19.26■□□□□ 0.67
SMCO4-206ENST00000596676 IGHDP01880 384 aa19.26■□□□□ 0.67
SMCO4-206ENST00000596676 KLRK1P26718 216 aa19.26■□□□□ 0.67
SMCO4-206ENST00000596676 METTL24Q5JXM2 366 aa19.26■□□□□ 0.67
SMCO4-206ENST00000596676 TBC1D16Q8TBP0 767 aa19.26■□□□□ 0.67
SMCO4-206ENST00000596676 ZNF277Q9NRM2 450 aaPredicted RBP19.26■□□□□ 0.67
SMCO4-206ENST00000596676 LTBP1Q14766 1721 aa19.25■□□□□ 0.67
SMCO4-206ENST00000596676 C6orf229H3BNL8 230 aa19.25■□□□□ 0.67
SMCO4-206ENST00000596676 CIAO1O76071 339 aa19.25■□□□□ 0.67
SMCO4-206ENST00000596676 TFCP2Q12800 502 aa19.25■□□□□ 0.67
SMCO4-206ENST00000596676 G3BP1Q13283 466 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMCO4-206ENST00000596676 CC2D2BQ6DHV5 1058 aa19.25■□□□□ 0.67
SMCO4-206ENST00000596676 VGLL2Q8N8G2 317 aa19.25■□□□□ 0.67
SMCO4-206ENST00000596676 TMX4Q9H1E5 349 aaPredicted RBP19.25■□□□□ 0.67
SMCO4-206ENST00000596676 NOP58Q9Y2X3 529 aaKnown RBP19.25■□□□□ 0.67
SMCO4-206ENST00000596676 XDHP47989 1333 aa19.25■□□□□ 0.67
SMCO4-206ENST00000596676 RIMBP2O15034 1052 aa19.24■□□□□ 0.67
SMCO4-206ENST00000596676 UFL1O94874 794 aa19.24■□□□□ 0.67
SMCO4-206ENST00000596676 FKBP4Q02790 459 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMCO4-206ENST00000596676 RTKN2Q8IZC4 609 aa19.24■□□□□ 0.67
SMCO4-206ENST00000596676 PODXL2Q9NZ53 605 aa19.24■□□□□ 0.67
SMCO4-206ENST00000596676 HMMRO75330 724 aa19.23■□□□□ 0.67
SMCO4-206ENST00000596676 NEFLP07196 543 aa19.23■□□□□ 0.67
SMCO4-206ENST00000596676 IL15P40933 162 aaPredicted RBP19.23■□□□□ 0.67
SMCO4-206ENST00000596676 OS9Q13438 667 aaPredicted RBP19.23■□□□□ 0.67
SMCO4-206ENST00000596676 SOGA3Q5TF21 947 aa19.23■□□□□ 0.67
SMCO4-206ENST00000596676 TXNRD3Q86VQ6 643 aa19.23■□□□□ 0.67
SMCO4-206ENST00000596676 ANKRD2Q9GZV1 360 aa19.23■□□□□ 0.67
SMCO4-206ENST00000596676 BCL11AQ9H165 835 aa19.23■□□□□ 0.67
SMCO4-206ENST00000596676 GGA1Q9UJY5 639 aa19.23■□□□□ 0.67
SMCO4-206ENST00000596676 MROH5Q6ZUA9 1318 aa19.23■□□□□ 0.67
SMCO4-206ENST00000596676 GRIN3BO60391 1043 aa19.22■□□□□ 0.67
SMCO4-206ENST00000596676 AOC3Q16853 763 aa19.22■□□□□ 0.67
SMCO4-206ENST00000596676 RTFDC1Q9BY42 306 aaPredicted RBP19.22■□□□□ 0.67
SMCO4-206ENST00000596676 TAOK3Q9H2K8 898 aa19.22■□□□□ 0.67
SMCO4-206ENST00000596676 CEP126Q9P2H0 1117 aa19.22■□□□□ 0.67
SMCO4-206ENST00000596676 CCDC88AQ3V6T2 1871 aa19.22■□□□□ 0.67
SMCO4-206ENST00000596676 COL4A5P29400 1685 aa19.21■□□□□ 0.67
SMCO4-206ENST00000596676 SMARCA5O60264 1052 aaPredicted RBP19.21■□□□□ 0.67
SMCO4-206ENST00000596676 PDE8BO95263 885 aa19.21■□□□□ 0.67
SMCO4-206ENST00000596676 ATP2B4P23634 1241 aa19.21■□□□□ 0.67
SMCO4-206ENST00000596676 AAMPQ13685 434 aa19.21■□□□□ 0.67
SMCO4-206ENST00000596676 PSMD1Q99460 953 aa19.21■□□□□ 0.67
SMCO4-206ENST00000596676 FBXO3Q9UK99 471 aa19.21■□□□□ 0.67
SMCO4-206ENST00000596676 ZNF804BA4D1E1 1349 aa19.21■□□□□ 0.67
SMCO4-206ENST00000596676 SBF1O95248 1867 aa19.2■□□□□ 0.66
SMCO4-206ENST00000596676 TIMM10P62072 90 aa19.2■□□□□ 0.66
SMCO4-206ENST00000596676 HDAC1Q13547 482 aaPredicted RBP19.2■□□□□ 0.66
SMCO4-206ENST00000596676 DCTPP1Q9H773 170 aa19.2■□□□□ 0.66
SMCO4-206ENST00000596676 IL1RAPL2Q9NP60 686 aa19.2■□□□□ 0.66
SMCO4-206ENST00000596676 IRS2Q9Y4H2 1338 aa19.2■□□□□ 0.66
SMCO4-206ENST00000596676 UTRNP46939 3433 aa19.19■□□□□ 0.66
SMCO4-206ENST00000596676 FGFR2P21802 821 aa19.19■□□□□ 0.66
SMCO4-206ENST00000596676 ADORA1P30542 326 aa19.19■□□□□ 0.66
SMCO4-206ENST00000596676 KCNJ4P48050 445 aa19.19■□□□□ 0.66
SMCO4-206ENST00000596676 DOK7Q18PE1 504 aa19.19■□□□□ 0.66
SMCO4-206ENST00000596676 LEMD3Q9Y2U8 911 aa19.19■□□□□ 0.66
SMCO4-206ENST00000596676 LTBP3Q9NS15 1303 aa19.19■□□□□ 0.66
SMCO4-206ENST00000596676 PPIP5K2O43314 1243 aa19.18■□□□□ 0.66
SMCO4-206ENST00000596676 IARSP41252 1262 aaKnown RBP19.18■□□□□ 0.66
SMCO4-206ENST00000596676 WASHC4Q2M389 1173 aa19.18■□□□□ 0.66
SMCO4-206ENST00000596676 C9orf131Q5VYM1 1079 aa19.18■□□□□ 0.66
SMCO4-206ENST00000596676 RHPN1Q8TCX5 695 aa19.18■□□□□ 0.66
SMCO4-206ENST00000596676 DCAF8L1A6NGE4 600 aa19.17■□□□□ 0.66
SMCO4-206ENST00000596676 GYG1P46976 350 aa19.17■□□□□ 0.66
SMCO4-206ENST00000596676 ATP2B3Q16720 1220 aa19.17■□□□□ 0.66
SMCO4-206ENST00000596676 GRIPAP1Q4V328 841 aa19.17■□□□□ 0.66
SMCO4-206ENST00000596676 RNF181Q9P0P0 153 aa19.17■□□□□ 0.66
SMCO4-206ENST00000596676 KIAA2012Q0VF49 1180 aa19.16■□□□□ 0.66
SMCO4-206ENST00000596676 UBE4AQ14139 1066 aa19.16■□□□□ 0.66
SMCO4-206ENST00000596676 PUM3Q15397 648 aaKnown RBP19.16■□□□□ 0.66
SMCO4-206ENST00000596676 LARGE2Q8N3Y3 721 aa19.16■□□□□ 0.66
SMCO4-206ENST00000596676 SUPT20HQ8NEM7 779 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms